RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 ERASQ7Z444 233 aa11.43□□□□□ -0.58
CCM2-205ENST00000472223 LINC00269Q8N2A0 174 aa11.43□□□□□ -0.58
CCM2-205ENST00000472223 UBE2WQ96B02 151 aa11.43□□□□□ -0.58
CCM2-205ENST00000472223 RMI2Q96E14 147 aa11.43□□□□□ -0.58
CCM2-205ENST00000472223 URB1-AS1Q96HZ7 61 aa11.43□□□□□ -0.58
CCM2-205ENST00000472223 TMEM141Q96I45 108 aa11.43□□□□□ -0.58
CCM2-205ENST00000472223 IGLV4-60A0A075B6I1 120 aa11.42□□□□□ -0.58
CCM2-205ENST00000472223 NFE4Q86UQ8 179 aa11.42□□□□□ -0.58
CCM2-205ENST00000472223 CDC42SE2Q9NRR3 84 aa11.42□□□□□ -0.58
CCM2-205ENST00000472223 ALMS1Q8TCU4 4167 aa11.41□□□□□ -0.58
CCM2-205ENST00000472223 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.41□□□□□ -0.58
CCM2-205ENST00000472223 ATP5LO75964 103 aa11.41□□□□□ -0.58
CCM2-205ENST00000472223 MRPS36P82909 103 aaKnown RBP11.41□□□□□ -0.58
CCM2-205ENST00000472223 REG3AQ06141 175 aa11.41□□□□□ -0.58
CCM2-205ENST00000472223 PMCHL1Q16048 86 aa11.41□□□□□ -0.58
CCM2-205ENST00000472223 Q8N3U1 123 aa11.41□□□□□ -0.58
CCM2-205ENST00000472223 TIMM17AQ99595 171 aa11.41□□□□□ -0.58
CCM2-205ENST00000472223 C2orf88Q9BSF0 95 aa11.41□□□□□ -0.58
CCM2-205ENST00000472223 VCX2Q9H322 139 aa11.41□□□□□ -0.58
CCM2-205ENST00000472223 IGKV3OR2-268A0A0C4DH90 116 aa11.4□□□□□ -0.58
CCM2-205ENST00000472223 MIAQ16674 131 aa11.4□□□□□ -0.58
CCM2-205ENST00000472223 TEX43Q6ZNM6 134 aa11.4□□□□□ -0.58
CCM2-205ENST00000472223 Q9HAA7 133 aa11.4□□□□□ -0.58
CCM2-205ENST00000472223 SS18Q15532 418 aa11.39□□□□□ -0.59
CCM2-205ENST00000472223 CLPSL2Q6UWE3 100 aa11.39□□□□□ -0.59
CCM2-205ENST00000472223 FAM19A2Q8N3H0 131 aa11.39□□□□□ -0.59
CCM2-205ENST00000472223 LYSTQ99698 3801 aa11.39□□□□□ -0.59
CCM2-205ENST00000472223 TM2D2Q9BX73 214 aa11.39□□□□□ -0.59
CCM2-205ENST00000472223 COX11Q9Y6N1 276 aa11.39□□□□□ -0.59
CCM2-205ENST00000472223 VPS13DQ5THJ4 4388 aa11.39□□□□□ -0.59
CCM2-205ENST00000472223 TRAV8-4A0A0B4J246 113 aa11.38□□□□□ -0.59
CCM2-205ENST00000472223 IGIPA6NJ69 53 aa11.38□□□□□ -0.59
CCM2-205ENST00000472223 CCL25O15444 150 aa11.38□□□□□ -0.59
CCM2-205ENST00000472223 LEPROTL1O95214 131 aa11.38□□□□□ -0.59
CCM2-205ENST00000472223 COA6Q5JTJ3 125 aaKnown RBP11.38□□□□□ -0.59
CCM2-205ENST00000472223 C1orf43Q9BWL3 253 aa11.38□□□□□ -0.59
CCM2-205ENST00000472223 HSPB8Q9UJY1 196 aa11.38□□□□□ -0.59
CCM2-205ENST00000472223 IGLV4-3A0A075B6K6 122 aa11.37□□□□□ -0.59
CCM2-205ENST00000472223 C1orf134Q5TEV5 83 aa11.37□□□□□ -0.59
CCM2-205ENST00000472223 Q6ZUT4 128 aa11.37□□□□□ -0.59
CCM2-205ENST00000472223 C6orf223Q8N319 242 aa11.37□□□□□ -0.59
CCM2-205ENST00000472223 PRR34Q9NV39 138 aa11.37□□□□□ -0.59
CCM2-205ENST00000472223 IGKV2D-24A0A075B6R9 120 aa11.36□□□□□ -0.59
CCM2-205ENST00000472223 IFITM10A6NMD0 228 aa11.36□□□□□ -0.59
CCM2-205ENST00000472223 PSCAO43653 123 aa11.36□□□□□ -0.59
CCM2-205ENST00000472223 PDZD11Q5EBL8 140 aa11.36□□□□□ -0.59
CCM2-205ENST00000472223 ENHOQ6UWT2 76 aa11.36□□□□□ -0.59
CCM2-205ENST00000472223 Q6ZR54 194 aa11.36□□□□□ -0.59
CCM2-205ENST00000472223 OPRPNQ99935 248 aaPredicted RBP11.36□□□□□ -0.59
CCM2-205ENST00000472223 A0A096LNJ9 63 aa11.35□□□□□ -0.59
CCM2-205ENST00000472223 PRSS1P07477 247 aa11.35□□□□□ -0.59
CCM2-205ENST00000472223 S100A2P29034 98 aa11.35□□□□□ -0.59
CCM2-205ENST00000472223 RNASE13Q5GAN3 156 aaKnown RBP11.35□□□□□ -0.59
CCM2-205ENST00000472223 DNAH1Q9P2D7 4330 aa11.34□□□□□ -0.59
CCM2-205ENST00000472223 TRAV13-1A0A0B4J241 112 aa11.34□□□□□ -0.59
CCM2-205ENST00000472223 NUPR1O60356 82 aa11.34□□□□□ -0.59
CCM2-205ENST00000472223 FABP4P15090 132 aa11.34□□□□□ -0.59
CCM2-205ENST00000472223 LINC00310P59036 64 aa11.34□□□□□ -0.59
CCM2-205ENST00000472223 IFI27L1Q96BM0 104 aa11.34□□□□□ -0.59
CCM2-205ENST00000472223 KRTAP1-5Q9BYS1 174 aa11.34□□□□□ -0.59
CCM2-205ENST00000472223 LINC00959A0A1B0GUT2 108 aa11.33□□□□□ -0.6
CCM2-205ENST00000472223 PMVKQ15126 192 aa11.33□□□□□ -0.6
CCM2-205ENST00000472223 IGLV10-54A0A075B6I4 117 aa11.32□□□□□ -0.6
CCM2-205ENST00000472223 SEC11AP67812 179 aa11.32□□□□□ -0.6
CCM2-205ENST00000472223 PACRGQ96M98 296 aaPredicted RBP11.32□□□□□ -0.6
CCM2-205ENST00000472223 BAALCQ8WXS3 180 aa11.31□□□□□ -0.6
CCM2-205ENST00000472223 CHCHD10Q8WYQ3 142 aaPredicted RBP11.31□□□□□ -0.6
CCM2-205ENST00000472223 AMELXQ99217 191 aa11.31□□□□□ -0.6
CCM2-205ENST00000472223 MAP1LC3CQ9BXW4 147 aa11.31□□□□□ -0.6
CCM2-205ENST00000472223 XCL1P47992 114 aa11.29□□□□□ -0.6
CCM2-205ENST00000472223 CST9LQ9H4G1 147 aa11.29□□□□□ -0.6
CCM2-205ENST00000472223 GEMIN7Q9H840 131 aaKnown RBP11.29□□□□□ -0.6
CCM2-205ENST00000472223 GAGE12HA6NDE8 117 aa11.28□□□□□ -0.6
CCM2-205ENST00000472223 H0Y8G0 127 aa11.28□□□□□ -0.6
CCM2-205ENST00000472223 SNRPEP62304 92 aaKnown RBP11.28□□□□□ -0.6
CCM2-205ENST00000472223 FAM104AQ969W3 186 aa11.28□□□□□ -0.6
CCM2-205ENST00000472223 TMA7Q9Y2S6 64 aaKnown RBP11.28□□□□□ -0.6
CCM2-205ENST00000472223 PRSS29PA6NIE9 313 aa11.27□□□□□ -0.61
CCM2-205ENST00000472223 UBE2D1P51668 147 aa11.27□□□□□ -0.61
CCM2-205ENST00000472223 ZC2HC1BQ5TFG8 222 aa11.27□□□□□ -0.61
CCM2-205ENST00000472223 CD164L2Q6UWJ8 174 aa11.27□□□□□ -0.61
CCM2-205ENST00000472223 DNAH6Q9C0G6 4158 aa11.27□□□□□ -0.61
CCM2-205ENST00000472223 TRAV12-1A0A0B4J245 112 aa11.26□□□□□ -0.61
CCM2-205ENST00000472223 EREGO14944 169 aa11.26□□□□□ -0.61
CCM2-205ENST00000472223 MALP21145 153 aa11.26□□□□□ -0.61
CCM2-205ENST00000472223 HERVK_113P63121 156 aa11.26□□□□□ -0.61
CCM2-205ENST00000472223 CHTOPQ9Y3Y2 248 aaKnown RBP11.26□□□□□ -0.61
CCM2-205ENST00000472223 CFAP161Q6P656 301 aa11.25□□□□□ -0.61
CCM2-205ENST00000472223 LINC00173Q6ZV60 143 aa11.25□□□□□ -0.61
CCM2-205ENST00000472223 HIST3H2BBQ8N257 126 aa11.25□□□□□ -0.61
CCM2-205ENST00000472223 COX7A2LO14548 114 aa11.24□□□□□ -0.61
CCM2-205ENST00000472223 LINC00242Q5T6M2 205 aa11.24□□□□□ -0.61
CCM2-205ENST00000472223 A0A0J9YXV3 536 aa11.23□□□□□ -0.61
CCM2-205ENST00000472223 TINCRA0A1B0GVN0 87 aa11.23□□□□□ -0.61
CCM2-205ENST00000472223 C5orf52A6NGY3 159 aa11.23□□□□□ -0.61
CCM2-205ENST00000472223 APOMO95445 188 aa11.23□□□□□ -0.61
CCM2-205ENST00000472223 LINC00336Q6ZUF6 198 aa11.23□□□□□ -0.61
CCM2-205ENST00000472223 KMT2AQ03164 3969 aa11.23□□□□□ -0.61
CCM2-205ENST00000472223 SACSQ9NZJ4 4579 aa11.22□□□□□ -0.61
CCM2-205ENST00000472223 H3BRM9 83 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 153.1 ms