RNA–Protein interactions for RNA: ENST00000472033.1

ABCA4-205, Transcript of ATP binding cassette subfamily A member 4, human

TSL 3

Gene ABCA4, Length 470 nt, Biotype processed transcript, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA4-205	ENST00000472033	KRTAP10-1	P60331	282 aa		4.16	□□□□□ -1.74
ABCA4-205	ENST00000472033	RASL11A	Q6T310	242 aa		4.16	□□□□□ -1.74
ABCA4-205	ENST00000472033	TEX261	Q6UWH6	196 aa		4.16	□□□□□ -1.74
ABCA4-205	ENST00000472033	C15orf54	Q8N8G6	183 aa		4.16	□□□□□ -1.74
ABCA4-205	ENST00000472033	BAALC	Q8WXS3	180 aa		4.16	□□□□□ -1.74
ABCA4-205	ENST00000472033	FRZB	Q92765	325 aa		4.16	□□□□□ -1.74
ABCA4-205	ENST00000472033	BORCS7	Q96B45	105 aa		4.16	□□□□□ -1.74
ABCA4-205	ENST00000472033	RNASE7	Q9H1E1	156 aa	Known RBP	4.16	□□□□□ -1.74
ABCA4-205	ENST00000472033	NIT2	Q9NQR4	276 aa		4.16	□□□□□ -1.74
ABCA4-205	ENST00000472033	ZNF727	A8MUV8	499 aa		4.15	□□□□□ -1.75
ABCA4-205	ENST00000472033		K7EN84	100 aa		4.15	□□□□□ -1.75
ABCA4-205	ENST00000472033	CTRL	P40313	264 aa		4.15	□□□□□ -1.75
ABCA4-205	ENST00000472033	NKX2-5	P52952	324 aa	Predicted RBP	4.15	□□□□□ -1.75
ABCA4-205	ENST00000472033	XG	P55808	180 aa		4.15	□□□□□ -1.75
ABCA4-205	ENST00000472033	MIA	Q16674	131 aa		4.15	□□□□□ -1.75
ABCA4-205	ENST00000472033	IQCJ	Q1A5X6	159 aa		4.15	□□□□□ -1.75
ABCA4-205	ENST00000472033	MPV17L2	Q567V2	206 aa		4.15	□□□□□ -1.75
ABCA4-205	ENST00000472033	ATRAID	Q6UW56	229 aa		4.15	□□□□□ -1.75
ABCA4-205	ENST00000472033	NTM-AS1	Q6ZSK4	140 aa		4.15	□□□□□ -1.75
ABCA4-205	ENST00000472033	FAM231D	Q6ZW35	169 aa		4.15	□□□□□ -1.75
ABCA4-205	ENST00000472033	TMEM70	Q9BUB7	260 aa		4.15	□□□□□ -1.75
ABCA4-205	ENST00000472033	CNFN	Q9BYD5	112 aa		4.15	□□□□□ -1.75
ABCA4-205	ENST00000472033	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.14	□□□□□ -1.75
ABCA4-205	ENST00000472033	UBE2L6	O14933	153 aa		4.14	□□□□□ -1.75
ABCA4-205	ENST00000472033	LECT2	O14960	151 aa		4.14	□□□□□ -1.75
ABCA4-205	ENST00000472033	FOXA3	P55318	350 aa	Predicted RBP	4.14	□□□□□ -1.75
ABCA4-205	ENST00000472033	RBX1	P62877	108 aa		4.14	□□□□□ -1.75
ABCA4-205	ENST00000472033	FAM74A3	Q4VXF1	159 aa		4.14	□□□□□ -1.75
ABCA4-205	ENST00000472033	ENHO	Q6UWT2	76 aa		4.14	□□□□□ -1.75
ABCA4-205	ENST00000472033	LINC00269	Q8N2A0	174 aa		4.14	□□□□□ -1.75
ABCA4-205	ENST00000472033	GTSF1	Q8WW33	167 aa		4.14	□□□□□ -1.75
ABCA4-205	ENST00000472033	PGLYRP4	Q96LB8	373 aa		4.14	□□□□□ -1.75
ABCA4-205	ENST00000472033	FAM210A	Q96ND0	272 aa		4.14	□□□□□ -1.75
ABCA4-205	ENST00000472033	SMIM7	Q9BQ49	75 aa		4.14	□□□□□ -1.75
ABCA4-205	ENST00000472033	TMEM243	Q9BU79	118 aa		4.14	□□□□□ -1.75
ABCA4-205	ENST00000472033	TRAV8-4	A0A0B4J246	113 aa		4.13	□□□□□ -1.75
ABCA4-205	ENST00000472033		A0A1B0GVG6	124 aa		4.13	□□□□□ -1.75
ABCA4-205	ENST00000472033	FAM231B	A6NCW3	169 aa		4.13	□□□□□ -1.75
ABCA4-205	ENST00000472033	SRP19	P09132	144 aa	Known RBP	4.13	□□□□□ -1.75
ABCA4-205	ENST00000472033	COTL1	Q14019	142 aa		4.13	□□□□□ -1.75
ABCA4-205	ENST00000472033	TMEM241	Q24JQ0	296 aa		4.13	□□□□□ -1.75
ABCA4-205	ENST00000472033	LCE3C	Q5T5A8	94 aa		4.13	□□□□□ -1.75
ABCA4-205	ENST00000472033	PRR34	Q9NV39	138 aa		4.13	□□□□□ -1.75
ABCA4-205	ENST00000472033	PCLO	Q9Y6V0	5065 aa		4.12	□□□□□ -1.75
ABCA4-205	ENST00000472033	LRP1B	Q9NZR2	4599 aa		4.12	□□□□□ -1.75
ABCA4-205	ENST00000472033	HSPG2	P98160	4391 aa		4.12	□□□□□ -1.75
ABCA4-205	ENST00000472033	TRAV26-2	A0A0B4J265	109 aa		4.12	□□□□□ -1.75
ABCA4-205	ENST00000472033		A0A1B0GUT8	65 aa		4.12	□□□□□ -1.75
ABCA4-205	ENST00000472033	HIGD1C	A8MV81	97 aa		4.12	□□□□□ -1.75
ABCA4-205	ENST00000472033	NCR2	O95944	276 aa		4.12	□□□□□ -1.75
ABCA4-205	ENST00000472033	HLA-DQA1	P01909	254 aa		4.12	□□□□□ -1.75
ABCA4-205	ENST00000472033	SMR3B	P02814	79 aa	Predicted RBP	4.12	□□□□□ -1.75
ABCA4-205	ENST00000472033	REG3A	Q06141	175 aa		4.12	□□□□□ -1.75
ABCA4-205	ENST00000472033	WFDC2	Q14508	124 aa		4.12	□□□□□ -1.75
ABCA4-205	ENST00000472033	PEA15	Q15121	130 aa		4.12	□□□□□ -1.75
ABCA4-205	ENST00000472033	LINC01551	Q86U37	167 aa		4.12	□□□□□ -1.75
ABCA4-205	ENST00000472033	GATD1	Q8NB37	220 aa		4.12	□□□□□ -1.75
ABCA4-205	ENST00000472033	TSKU	Q8WUA8	353 aa		4.12	□□□□□ -1.75
ABCA4-205	ENST00000472033	SMDT1	Q9H4I9	107 aa		4.12	□□□□□ -1.75
ABCA4-205	ENST00000472033	OSTC	Q9NRP0	149 aa		4.12	□□□□□ -1.75
ABCA4-205	ENST00000472033	RYR1	P21817	5038 aa		4.11	□□□□□ -1.75
ABCA4-205	ENST00000472033		I3L3M4	83 aa		4.11	□□□□□ -1.75
ABCA4-205	ENST00000472033	INAFM2	P0DMQ5	153 aa		4.11	□□□□□ -1.75
ABCA4-205	ENST00000472033	PMCH	P20382	165 aa		4.11	□□□□□ -1.75
ABCA4-205	ENST00000472033	RIG	Q13278	110 aa		4.11	□□□□□ -1.75
ABCA4-205	ENST00000472033		Q5VSD8	79 aa		4.11	□□□□□ -1.75
ABCA4-205	ENST00000472033	AMMECR1L	Q6DCA0	310 aa		4.11	□□□□□ -1.75
ABCA4-205	ENST00000472033	CLPSL2	Q6UWE3	100 aa		4.11	□□□□□ -1.75
ABCA4-205	ENST00000472033	TMEM191A	Q9H0A3	160 aa		4.11	□□□□□ -1.75
ABCA4-205	ENST00000472033	IGLV10-54	A0A075B6I4	117 aa		4.1	□□□□□ -1.75
ABCA4-205	ENST00000472033	SDHAF1	A6NFY7	115 aa		4.1	□□□□□ -1.75
ABCA4-205	ENST00000472033	PPP1R17	O96001	155 aa		4.1	□□□□□ -1.75
ABCA4-205	ENST00000472033	APCS	P02743	223 aa		4.1	□□□□□ -1.75
ABCA4-205	ENST00000472033	DSCR10	P59022	87 aa		4.1	□□□□□ -1.75
ABCA4-205	ENST00000472033	C20orf203	Q8NBC4	194 aa		4.1	□□□□□ -1.75
ABCA4-205	ENST00000472033	DEFB104A	Q8WTQ1	72 aa		4.1	□□□□□ -1.75
ABCA4-205	ENST00000472033	ISOC2	Q96AB3	205 aa		4.1	□□□□□ -1.75
ABCA4-205	ENST00000472033	RPL39L	Q96EH5	51 aa	Known RBP	4.1	□□□□□ -1.75
ABCA4-205	ENST00000472033	ST20	Q9HBF5	79 aa		4.1	□□□□□ -1.75
ABCA4-205	ENST00000472033	NAT8	Q9UHE5	227 aa		4.1	□□□□□ -1.75
ABCA4-205	ENST00000472033	NAT8B	Q9UHF3	227 aa		4.1	□□□□□ -1.75
ABCA4-205	ENST00000472033	DNAH5	Q8TE73	4624 aa		4.09	□□□□□ -1.75
ABCA4-205	ENST00000472033	IGLV4-60	A0A075B6I1	120 aa		4.09	□□□□□ -1.75
ABCA4-205	ENST00000472033	TRBV6-5	A0A0K0K1A5	114 aa		4.09	□□□□□ -1.75
ABCA4-205	ENST00000472033	ZNF25	P17030	456 aa	Predicted RBP	4.09	□□□□□ -1.75
ABCA4-205	ENST00000472033	RAB4A	P20338	218 aa		4.09	□□□□□ -1.75
ABCA4-205	ENST00000472033	RPL23	P62829	140 aa	Known RBP	4.09	□□□□□ -1.75
ABCA4-205	ENST00000472033	HAMP	P81172	84 aa		4.09	□□□□□ -1.75
ABCA4-205	ENST00000472033	ADIRF	Q15847	76 aa		4.09	□□□□□ -1.75
ABCA4-205	ENST00000472033	LINC01620	Q4KN68	170 aa		4.09	□□□□□ -1.75
ABCA4-205	ENST00000472033	RNASEK	Q6P5S7	137 aa	Known RBP	4.09	□□□□□ -1.75
ABCA4-205	ENST00000472033	CFAP161	Q6P656	301 aa		4.09	□□□□□ -1.75
ABCA4-205	ENST00000472033		Q6ZSA8	131 aa		4.09	□□□□□ -1.75
ABCA4-205	ENST00000472033	NUP35	Q8NFH5	326 aa		4.09	□□□□□ -1.75
ABCA4-205	ENST00000472033	MRAP2	Q96G30	205 aa		4.09	□□□□□ -1.75
ABCA4-205	ENST00000472033	TMEM101	Q96IK0	257 aa		4.09	□□□□□ -1.75
ABCA4-205	ENST00000472033	BTF3L4	Q96K17	158 aa		4.09	□□□□□ -1.75
ABCA4-205	ENST00000472033		V9GYV3	84 aa		4.09	□□□□□ -1.75
ABCA4-205	ENST00000472033	APOB	P04114	4563 aa	Known RBP	4.09	□□□□□ -1.76
ABCA4-205	ENST00000472033	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	4.08	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms