RNA–Protein interactions for RNA: ENST00000469080.5

USP11-206, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 1 (best)

Gene USP11, Length 3,467 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-206ENST00000469080 STAB1Q9NY15 2570 aa9.19□□□□□ -0.94
USP11-206ENST00000469080 IGKV3OR2-268A0A0C4DH90 116 aa9.19□□□□□ -0.94
USP11-206ENST00000469080 CRYGAP11844 174 aa9.19□□□□□ -0.94
USP11-206ENST00000469080 TMEM190Q8WZ59 177 aa9.19□□□□□ -0.94
USP11-206ENST00000469080 SPANXCQ9NY87 97 aa9.19□□□□□ -0.94
USP11-206ENST00000469080 IGHV3-33P01772 117 aa9.18□□□□□ -0.94
USP11-206ENST00000469080 C1orf195Q5TG92 126 aa9.18□□□□□ -0.94
USP11-206ENST00000469080 IGHV3-38A0A0C4DH36 116 aa9.18□□□□□ -0.94
USP11-206ENST00000469080 A0A0J9YY99 117 aa9.18□□□□□ -0.94
USP11-206ENST00000469080 TRAV8-3A0A0A6YYJ7 113 aa9.17□□□□□ -0.94
USP11-206ENST00000469080 CRYGDP07320 174 aa9.17□□□□□ -0.94
USP11-206ENST00000469080 IMUPQ9GZP8 106 aa9.17□□□□□ -0.94
USP11-206ENST00000469080 J3QQQ9 107 aa9.17□□□□□ -0.94
USP11-206ENST00000469080 ZNF876PQ49A33 203 aa9.17□□□□□ -0.94
USP11-206ENST00000469080 H7C423 109 aa9.16□□□□□ -0.94
USP11-206ENST00000469080 IGHV3-30P01768 117 aa9.16□□□□□ -0.94
USP11-206ENST00000469080 IGHV3-30-5P0DP03 117 aa9.16□□□□□ -0.94
USP11-206ENST00000469080 DSCR9P59020 149 aa9.16□□□□□ -0.94
USP11-206ENST00000469080 RHOHQ15669 191 aa9.16□□□□□ -0.94
USP11-206ENST00000469080 ZNF469Q96JG9 3925 aaPredicted RBP9.16□□□□□ -0.94
USP11-206ENST00000469080 TMEM61Q8N0U2 210 aa9.15□□□□□ -0.94
USP11-206ENST00000469080 ATOX1O00244 68 aa9.15□□□□□ -0.94
USP11-206ENST00000469080 P0DMU3 169 aa9.15□□□□□ -0.94
USP11-206ENST00000469080 FAM231AP0DMU4 169 aa9.15□□□□□ -0.94
USP11-206ENST00000469080 FAM231CP0DMU5 169 aa9.15□□□□□ -0.94
USP11-206ENST00000469080 CIRBPQ14011 172 aaKnown RBP9.15□□□□□ -0.94
USP11-206ENST00000469080 TMEM86BQ8N661 226 aa9.15□□□□□ -0.94
USP11-206ENST00000469080 BRK1Q8WUW1 75 aa9.15□□□□□ -0.94
USP11-206ENST00000469080 CLEC2BQ92478 149 aa9.15□□□□□ -0.94
USP11-206ENST00000469080 LINC00643Q86TS7 51 aa9.15□□□□□ -0.95
USP11-206ENST00000469080 RNF185Q96GF1 192 aa9.15□□□□□ -0.95
USP11-206ENST00000469080 COL6A5A8TX70 2615 aa9.14□□□□□ -0.95
USP11-206ENST00000469080 PRSS2P07478 247 aa9.14□□□□□ -0.95
USP11-206ENST00000469080 RPL39P62891 51 aaKnown RBP9.14□□□□□ -0.95
USP11-206ENST00000469080 GPHB5Q86YW7 130 aa9.14□□□□□ -0.95
USP11-206ENST00000469080 WFDC10AQ9H1F0 79 aa9.14□□□□□ -0.95
USP11-206ENST00000469080 FAM240AA0A1B0GVK7 77 aa9.14□□□□□ -0.95
USP11-206ENST00000469080 ATP5G1P05496 136 aa9.14□□□□□ -0.95
USP11-206ENST00000469080 COX6CP09669 75 aa9.14□□□□□ -0.95
USP11-206ENST00000469080 OPRPNQ99935 248 aaPredicted RBP9.14□□□□□ -0.95
USP11-206ENST00000469080 TRIAP1O43715 76 aa9.14□□□□□ -0.95
USP11-206ENST00000469080 A0A0U1RRA0 63 aa9.13□□□□□ -0.95
USP11-206ENST00000469080 PROK1P58294 105 aa9.13□□□□□ -0.95
USP11-206ENST00000469080 ZFAND2AQ8N6M9 145 aa9.13□□□□□ -0.95
USP11-206ENST00000469080 C2orf48Q96LS8 159 aa9.13□□□□□ -0.95
USP11-206ENST00000469080 IL17DQ8TAD2 202 aa9.13□□□□□ -0.95
USP11-206ENST00000469080 J3QKU1 62 aa9.12□□□□□ -0.95
USP11-206ENST00000469080 PEMTQ9UBM1 199 aa9.12□□□□□ -0.95
USP11-206ENST00000469080 LGALS3P17931 250 aaKnown RBP9.12□□□□□ -0.95
USP11-206ENST00000469080 SMCR5Q8TEV8 140 aa9.12□□□□□ -0.95
USP11-206ENST00000469080 DPH3P1Q9H4G8 78 aa9.12□□□□□ -0.95
USP11-206ENST00000469080 MUSTN1Q8IVN3 82 aa9.12□□□□□ -0.95
USP11-206ENST00000469080 HIVEP1P15822 2718 aa9.12□□□□□ -0.95
USP11-206ENST00000469080 OTOGQ6ZRI0 2925 aa9.11□□□□□ -0.95
USP11-206ENST00000469080 H3BT86 120 aa9.11□□□□□ -0.95
USP11-206ENST00000469080 CD28P10747 220 aa9.11□□□□□ -0.95
USP11-206ENST00000469080 PSMB8P28062 276 aa9.11□□□□□ -0.95
USP11-206ENST00000469080 SUMO2P61956 95 aaKnown RBP9.11□□□□□ -0.95
USP11-206ENST00000469080 C9orf47Q6ZRZ4 202 aa9.1□□□□□ -0.95
USP11-206ENST00000469080 SLC25A29Q8N8R3 303 aa9.1□□□□□ -0.95
USP11-206ENST00000469080 TMEM263Q8WUH6 116 aaKnown RBP9.1□□□□□ -0.95
USP11-206ENST00000469080 SPANXDQ9BXN6 97 aa9.1□□□□□ -0.95
USP11-206ENST00000469080 NPC2P61916 151 aa9.1□□□□□ -0.95
USP11-206ENST00000469080 TRAV12-1A0A0B4J245 112 aa9.1□□□□□ -0.95
USP11-206ENST00000469080 SDIM1Q6ZPB5 146 aa9.1□□□□□ -0.95
USP11-206ENST00000469080 STHQ8IWL8 128 aa9.1□□□□□ -0.95
USP11-206ENST00000469080 ZNF702PQ9H963 129 aa9.1□□□□□ -0.95
USP11-206ENST00000469080 VWFP04275 2813 aa9.09□□□□□ -0.95
USP11-206ENST00000469080 DNAJC9-AS1A6NH13 148 aa9.09□□□□□ -0.95
USP11-206ENST00000469080 C2orf66Q6UXQ4 117 aa9.09□□□□□ -0.95
USP11-206ENST00000469080 KMT2BQ9UMN6 2715 aaPredicted RBP9.09□□□□□ -0.95
USP11-206ENST00000469080 IGKV3D-7A0A0C4DH55 119 aa9.09□□□□□ -0.95
USP11-206ENST00000469080 TP53TG1Q9Y2A0 90 aa9.09□□□□□ -0.95
USP11-206ENST00000469080 TRGV1A0A0A0MS02 117 aa9.08□□□□□ -0.96
USP11-206ENST00000469080 SDHAF1A6NFY7 115 aa9.08□□□□□ -0.96
USP11-206ENST00000469080 C11orf86A6NJI1 115 aa9.08□□□□□ -0.96
USP11-206ENST00000469080 PF4P02776 101 aa9.08□□□□□ -0.96
USP11-206ENST00000469080 ACYP1P07311 99 aa9.08□□□□□ -0.96
USP11-206ENST00000469080 C9orf85Q96MD7 179 aa9.08□□□□□ -0.96
USP11-206ENST00000469080 ADARB2-AS1A8MUL3 147 aa9.08□□□□□ -0.96
USP11-206ENST00000469080 DGAT2L7PQ6IED9 249 aa9.08□□□□□ -0.96
USP11-206ENST00000469080 Q6YL49 198 aa9.08□□□□□ -0.96
USP11-206ENST00000469080 IGLV1-40P01703 118 aa9.08□□□□□ -0.96
USP11-206ENST00000469080 NEXN-AS1Q8NBZ9 246 aa9.08□□□□□ -0.96
USP11-206ENST00000469080 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.07□□□□□ -0.96
USP11-206ENST00000469080 EIF4EBP3O60516 100 aaPredicted RBP9.07□□□□□ -0.96
USP11-206ENST00000469080 Q6ZSV7 163 aa9.07□□□□□ -0.96
USP11-206ENST00000469080 TSPEAR-AS2P59090 65 aa9.07□□□□□ -0.96
USP11-206ENST00000469080 SERP2Q8N6R1 65 aa9.07□□□□□ -0.96
USP11-206ENST00000469080 SMIM2Q9BVW6 85 aa9.07□□□□□ -0.96
USP11-206ENST00000469080 ICOSQ9Y6W8 199 aa9.07□□□□□ -0.96
USP11-206ENST00000469080 IGLV2-18A0A075B6J9 118 aa9.07□□□□□ -0.96
USP11-206ENST00000469080 IGHV1OR15-1A0A075B7D0 117 aa9.07□□□□□ -0.96
USP11-206ENST00000469080 A0A0B4J2C4 111 aa9.06□□□□□ -0.96
USP11-206ENST00000469080 RNASE3P12724 160 aaKnown RBP9.06□□□□□ -0.96
USP11-206ENST00000469080 PLA2G2AP14555 144 aa9.06□□□□□ -0.96
USP11-206ENST00000469080 LINC01561Q8N1V8 128 aa9.06□□□□□ -0.96
USP11-206ENST00000469080 RPL18AQ02543 176 aaKnown RBP9.06□□□□□ -0.96
USP11-206ENST00000469080 SUMO4Q6EEV6 95 aa9.06□□□□□ -0.96
USP11-206ENST00000469080 ESM1Q9NQ30 184 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms