RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 RAB4AP20338 218 aa15.37■□□□□ 0.05
PTCH1-210ENST00000468211 STPG4Q8N801 248 aa15.37■□□□□ 0.05
PTCH1-210ENST00000468211 TSKUQ8WUA8 353 aa15.37■□□□□ 0.05
PTCH1-210ENST00000468211 BORCS7Q96B45 105 aa15.37■□□□□ 0.05
PTCH1-210ENST00000468211 TMEM101Q96IK0 257 aa15.37■□□□□ 0.05
PTCH1-210ENST00000468211 BTF3L4Q96K17 158 aa15.37■□□□□ 0.05
PTCH1-210ENST00000468211 AMN1Q8IY45 258 aa15.36■□□□□ 0.05
PTCH1-210ENST00000468211 C7orf33Q8WU49 177 aa15.36■□□□□ 0.05
PTCH1-210ENST00000468211 EIF5A2Q9GZV4 153 aaKnown RBP15.36■□□□□ 0.05
PTCH1-210ENST00000468211 TNXBP22105 4242 aa15.35■□□□□ 0.05
PTCH1-210ENST00000468211 MRAP2Q96G30 205 aa15.35■□□□□ 0.05
PTCH1-210ENST00000468211 CDC42SE2Q9NRR3 84 aa15.35■□□□□ 0.05
PTCH1-210ENST00000468211 SMKR1H3BMG3 65 aa15.34■□□□□ 0.05
PTCH1-210ENST00000468211 MRPL52Q86TS9 123 aaKnown RBP15.34■□□□□ 0.05
PTCH1-210ENST00000468211 OSTCQ9NRP0 149 aa15.34■□□□□ 0.05
PTCH1-210ENST00000468211 TRBV27A0A0K0K1C4 114 aa15.33■□□□□ 0.04
PTCH1-210ENST00000468211 ZNF727A8MUV8 499 aa15.33■□□□□ 0.04
PTCH1-210ENST00000468211 SRP19P09132 144 aaKnown RBP15.33■□□□□ 0.04
PTCH1-210ENST00000468211 FAM210AQ96ND0 272 aa15.33■□□□□ 0.04
PTCH1-210ENST00000468211 IGHV1-58A0A0C4DH39 117 aa15.32■□□□□ 0.04
PTCH1-210ENST00000468211 PRR3P79522 188 aaKnown RBP15.32■□□□□ 0.04
PTCH1-210ENST00000468211 V9GYV3 84 aa15.32■□□□□ 0.04
PTCH1-210ENST00000468211 ZNF664Q8N3J9 261 aa15.31■□□□□ 0.04
PTCH1-210ENST00000468211 C7orf77A4D0Y5 90 aa15.3■□□□□ 0.04
PTCH1-210ENST00000468211 SS18Q15532 418 aa15.3■□□□□ 0.04
PTCH1-210ENST00000468211 CARD19Q96LW7 228 aa15.3■□□□□ 0.04
PTCH1-210ENST00000468211 CD164L2Q6UWJ8 174 aa15.29■□□□□ 0.04
PTCH1-210ENST00000468211 NRACQ8N912 160 aa15.29■□□□□ 0.04
PTCH1-210ENST00000468211 NUP35Q8NFH5 326 aa15.29■□□□□ 0.04
PTCH1-210ENST00000468211 VCYO14598 125 aa15.26■□□□□ 0.03
PTCH1-210ENST00000468211 SYCNQ0VAF6 134 aa15.26■□□□□ 0.03
PTCH1-210ENST00000468211 RIGQ13278 110 aa15.26■□□□□ 0.03
PTCH1-210ENST00000468211 RNASE13Q5GAN3 156 aaKnown RBP15.26■□□□□ 0.03
PTCH1-210ENST00000468211 ISOC2Q96AB3 205 aa15.26■□□□□ 0.03
PTCH1-210ENST00000468211 ODF1Q14990 250 aa15.25■□□□□ 0.03
PTCH1-210ENST00000468211 UBE2D4Q9Y2X8 147 aa15.25■□□□□ 0.03
PTCH1-210ENST00000468211 ZNF561-AS1K7EIQ3 104 aa15.24■□□□□ 0.03
PTCH1-210ENST00000468211 FCER1GP30273 86 aa15.24■□□□□ 0.03
PTCH1-210ENST00000468211 SUMO2P61956 95 aaKnown RBP15.24■□□□□ 0.03
PTCH1-210ENST00000468211 LINC00474Q9P2X8 69 aa15.24■□□□□ 0.03
PTCH1-210ENST00000468211 LINC01600Q96MT4 127 aa15.23■□□□□ 0.03
PTCH1-210ENST00000468211 IGLV4-69A0A075B6H9 119 aa15.22■□□□□ 0.03
PTCH1-210ENST00000468211 C9JQL5 133 aa15.22■□□□□ 0.03
PTCH1-210ENST00000468211 CAMPP49913 170 aa15.22■□□□□ 0.03
PTCH1-210ENST00000468211 RPL23P62829 140 aaKnown RBP15.22■□□□□ 0.03
PTCH1-210ENST00000468211 MRPL51Q4U2R6 128 aaKnown RBP15.22■□□□□ 0.03
PTCH1-210ENST00000468211 C1orf196B1AJZ1 125 aa15.21■□□□□ 0.03
PTCH1-210ENST00000468211 TMEM241Q24JQ0 296 aa15.21■□□□□ 0.03
PTCH1-210ENST00000468211 CSDC2Q9Y534 153 aaKnown RBP15.21■□□□□ 0.03
PTCH1-210ENST00000468211 PTTG1IPP53801 180 aa15.2■□□□□ 0.02
PTCH1-210ENST00000468211 FAM104BQ5XKR9 115 aa15.2■□□□□ 0.02
PTCH1-210ENST00000468211 Q6ZUT4 128 aa15.2■□□□□ 0.02
PTCH1-210ENST00000468211 NAT8BQ9UHF3 227 aa15.2■□□□□ 0.02
PTCH1-210ENST00000468211 TRAV13-1A0A0B4J241 112 aa15.19■□□□□ 0.02
PTCH1-210ENST00000468211 COX7A2LO14548 114 aa15.19■□□□□ 0.02
PTCH1-210ENST00000468211 MALP21145 153 aa15.19■□□□□ 0.02
PTCH1-210ENST00000468211 PKIGQ9Y2B9 76 aa15.19■□□□□ 0.02
PTCH1-210ENST00000468211 PPP1R17O96001 155 aa15.18■□□□□ 0.02
PTCH1-210ENST00000468211 GAGE2BQ13066 116 aa15.18■□□□□ 0.02
PTCH1-210ENST00000468211 ADIRFQ15847 76 aa15.18■□□□□ 0.02
PTCH1-210ENST00000468211 KIR2DL4Q99706 377 aa15.18■□□□□ 0.02
PTCH1-210ENST00000468211 SMIM27A0A1W2PRY6 76 aa15.17■□□□□ 0.02
PTCH1-210ENST00000468211 SRSF3P84103 164 aaKnown RBP15.17■□□□□ 0.02
PTCH1-210ENST00000468211 FAM74A3Q4VXF1 159 aa15.17■□□□□ 0.02
PTCH1-210ENST00000468211 C5orf38Q86SI9 138 aa15.17■□□□□ 0.02
PTCH1-210ENST00000468211 LRP2P98164 4655 aa15.17■□□□□ 0.02
PTCH1-210ENST00000468211 LOC107984640A0A0U1RRK4 108 aa15.16■□□□□ 0.02
PTCH1-210ENST00000468211 A0A1W2PNN7 141 aa15.16■□□□□ 0.02
PTCH1-210ENST00000468211 SRSF9Q13242 221 aaKnown RBP eCLIP15.16■□□□□ 0.02
PTCH1-210ENST00000468211 FAM104AQ969W3 186 aa15.16■□□□□ 0.02
PTCH1-210ENST00000468211 SPINK6Q6UWN8 80 aa15.15■□□□□ 0.02
PTCH1-210ENST00000468211 A0A0J9YXV3 536 aa15.14■□□□□ 0.01
PTCH1-210ENST00000468211 A0A1B0GVG6 124 aa15.14■□□□□ 0.01
PTCH1-210ENST00000468211 PPP1R2P9O14990 202 aa15.14■□□□□ 0.01
PTCH1-210ENST00000468211 RPL39P62891 51 aaKnown RBP15.14■□□□□ 0.01
PTCH1-210ENST00000468211 CAMK2N2Q96S95 79 aa15.14■□□□□ 0.01
PTCH1-210ENST00000468211 TIMM21Q9BVV7 248 aa15.14■□□□□ 0.01
PTCH1-210ENST00000468211 NAT8Q9UHE5 227 aa15.14■□□□□ 0.01
PTCH1-210ENST00000468211 TRBV24-1A0A075B6N3 115 aa15.13■□□□□ 0.01
PTCH1-210ENST00000468211 KRTAP10-8P60410 259 aa15.13■□□□□ 0.01
PTCH1-210ENST00000468211 Q6ZRP5 223 aa15.13■□□□□ 0.01
PTCH1-210ENST00000468211 C20orf78Q9BR46 151 aa15.13■□□□□ 0.01
PTCH1-210ENST00000468211 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.12■□□□□ 0.01
PTCH1-210ENST00000468211 SMAGPQ0VAQ4 97 aa15.12■□□□□ 0.01
PTCH1-210ENST00000468211 LINC00862A6NCI5 91 aa15.11■□□□□ 0.01
PTCH1-210ENST00000468211 TNFRSF6BO95407 300 aa15.11■□□□□ 0.01
PTCH1-210ENST00000468211 APOMO95445 188 aa15.11■□□□□ 0.01
PTCH1-210ENST00000468211 CKS2P33552 79 aa15.11■□□□□ 0.01
PTCH1-210ENST00000468211 C2orf48Q96LS8 159 aa15.11■□□□□ 0.01
PTCH1-210ENST00000468211 OPRPNQ99935 248 aaPredicted RBP15.11■□□□□ 0.01
PTCH1-210ENST00000468211 RPL32P62910 135 aaKnown RBP15.1■□□□□ 0.01
PTCH1-210ENST00000468211 MRPL54Q6P161 138 aaKnown RBP15.09■□□□□ 0.01
PTCH1-210ENST00000468211 TMEM18Q96B42 140 aa15.09■□□□□ 0.01
PTCH1-210ENST00000468211 SMIM2Q9BVW6 85 aa15.09■□□□□ 0.01
PTCH1-210ENST00000468211 D6R8Y8 96 aa15.08■□□□□ 0
PTCH1-210ENST00000468211 SPAG11BQ08648 103 aa15.08■□□□□ 0
PTCH1-210ENST00000468211 C9orf116Q5BN46 136 aaPredicted RBP15.08■□□□□ 0
PTCH1-210ENST00000468211 REG3GQ6UW15 175 aa15.08■□□□□ 0
PTCH1-210ENST00000468211 A0A1B0GW15 77 aa15.07■□□□□ 0
PTCH1-210ENST00000468211 NPYP01303 97 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms