RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 H7C2G1 150 aa10.67□□□□□ -0.7
PRPF38B-204ENST00000467302 CCL24O00175 119 aa10.67□□□□□ -0.7
PRPF38B-204ENST00000467302 RNASE13Q5GAN3 156 aaKnown RBP10.67□□□□□ -0.7
PRPF38B-204ENST00000467302 ADAMTSL4-AS1Q5T5F5 129 aa10.67□□□□□ -0.7
PRPF38B-204ENST00000467302 VSIG2Q96IQ7 327 aa10.67□□□□□ -0.7
PRPF38B-204ENST00000467302 LINC01600Q96MT4 127 aa10.67□□□□□ -0.7
PRPF38B-204ENST00000467302 SPANXDQ9BXN6 97 aa10.67□□□□□ -0.7
PRPF38B-204ENST00000467302 SPANXCQ9NY87 97 aa10.67□□□□□ -0.7
PRPF38B-204ENST00000467302 NACAE9PAV3 2078 aa10.66□□□□□ -0.7
PRPF38B-204ENST00000467302 TRBV30A0A0K0K1B3 111 aa10.66□□□□□ -0.7
PRPF38B-204ENST00000467302 NDUFA7O95182 113 aa10.66□□□□□ -0.7
PRPF38B-204ENST00000467302 ZNF415Q09FC8 603 aa10.66□□□□□ -0.7
PRPF38B-204ENST00000467302 CITED2Q99967 270 aaPredicted RBP10.66□□□□□ -0.7
PRPF38B-204ENST00000467302 C11orf72Q8NBR9 251 aa10.65□□□□□ -0.7
PRPF38B-204ENST00000467302 SMR3AQ99954 134 aa10.65□□□□□ -0.7
PRPF38B-204ENST00000467302 NDUFA12Q9UI09 145 aa10.65□□□□□ -0.7
PRPF38B-204ENST00000467302 NF1P21359 2839 aa10.65□□□□□ -0.7
PRPF38B-204ENST00000467302 CKS1BP61024 79 aa10.65□□□□□ -0.71
PRPF38B-204ENST00000467302 ATXN8Q156A1 80 aa10.65□□□□□ -0.71
PRPF38B-204ENST00000467302 LINC00467Q9BRT7 94 aa10.65□□□□□ -0.71
PRPF38B-204ENST00000467302 TRIAP1O43715 76 aa10.64□□□□□ -0.71
PRPF38B-204ENST00000467302 LY6G6DO95868 133 aa10.64□□□□□ -0.71
PRPF38B-204ENST00000467302 HECTD1Q9ULT8 2610 aa10.64□□□□□ -0.71
PRPF38B-204ENST00000467302 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.63□□□□□ -0.71
PRPF38B-204ENST00000467302 TRAV25A0A0B4J276 109 aa10.63□□□□□ -0.71
PRPF38B-204ENST00000467302 IGKV2-29A2NJV5 120 aaPredicted RBP10.63□□□□□ -0.71
PRPF38B-204ENST00000467302 IGHV3-53P01767 116 aa10.63□□□□□ -0.71
PRPF38B-204ENST00000467302 MIAQ16674 131 aa10.63□□□□□ -0.71
PRPF38B-204ENST00000467302 Q1RN00 199 aa10.63□□□□□ -0.71
PRPF38B-204ENST00000467302 BEAN1Q3B7T3 259 aa10.63□□□□□ -0.71
PRPF38B-204ENST00000467302 LINC01620Q4KN68 170 aa10.63□□□□□ -0.71
PRPF38B-204ENST00000467302 MAP6D1Q9H9H5 199 aa10.63□□□□□ -0.71
PRPF38B-204ENST00000467302 PRSS2P07478 247 aa10.63□□□□□ -0.71
PRPF38B-204ENST00000467302 RNF183Q96D59 192 aa10.63□□□□□ -0.71
PRPF38B-204ENST00000467302 DNAJC30Q96LL9 226 aa10.63□□□□□ -0.71
PRPF38B-204ENST00000467302 A8MZ25 164 aa10.62□□□□□ -0.71
PRPF38B-204ENST00000467302 TMEM262E9PQX1 116 aa10.62□□□□□ -0.71
PRPF38B-204ENST00000467302 ZFAND6Q6FIF0 208 aa10.62□□□□□ -0.71
PRPF38B-204ENST00000467302 MTORP42345 2549 aa10.61□□□□□ -0.71
PRPF38B-204ENST00000467302 CUBNO60494 3623 aa10.61□□□□□ -0.71
PRPF38B-204ENST00000467302 LINC01587Q99440 93 aa10.61□□□□□ -0.71
PRPF38B-204ENST00000467302 IGLV5-45A0A087WSX0 123 aa10.6□□□□□ -0.71
PRPF38B-204ENST00000467302 RS1O15537 224 aa10.6□□□□□ -0.71
PRPF38B-204ENST00000467302 TIMM17BO60830 172 aa10.6□□□□□ -0.71
PRPF38B-204ENST00000467302 ICOSQ9Y6W8 199 aa10.6□□□□□ -0.71
PRPF38B-204ENST00000467302 HIVEP2P31629 2446 aa10.6□□□□□ -0.71
PRPF38B-204ENST00000467302 IGHV3-38A0A0C4DH36 116 aa10.6□□□□□ -0.71
PRPF38B-204ENST00000467302 TRBV10-2A0A0K0K1G8 114 aa10.6□□□□□ -0.71
PRPF38B-204ENST00000467302 RPL13AP40429 203 aaKnown RBP10.59□□□□□ -0.71
PRPF38B-204ENST00000467302 TIRAPP58753 221 aa10.59□□□□□ -0.71
PRPF38B-204ENST00000467302 NTN5Q8WTR8 489 aaPredicted RBP10.59□□□□□ -0.71
PRPF38B-204ENST00000467302 GEMIN7Q9H840 131 aaKnown RBP10.59□□□□□ -0.71
PRPF38B-204ENST00000467302 INSP01308 110 aa10.58□□□□□ -0.72
PRPF38B-204ENST00000467302 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.58□□□□□ -0.72
PRPF38B-204ENST00000467302 CDKN2A-AS1Q9UH64 79 aa10.58□□□□□ -0.72
PRPF38B-204ENST00000467302 NDUFA1O15239 70 aa10.57□□□□□ -0.72
PRPF38B-204ENST00000467302 IFITM1P13164 125 aa10.57□□□□□ -0.72
PRPF38B-204ENST00000467302 TMEM101Q96IK0 257 aa10.57□□□□□ -0.72
PRPF38B-204ENST00000467302 CLUHP3Q96NS8 147 aa10.57□□□□□ -0.72
PRPF38B-204ENST00000467302 CITED1Q99966 193 aa10.57□□□□□ -0.72
PRPF38B-204ENST00000467302 IGHV3OR16-12A0A075B7B8 117 aa10.56□□□□□ -0.72
PRPF38B-204ENST00000467302 NPC2P61916 151 aa10.56□□□□□ -0.72
PRPF38B-204ENST00000467302 ODF3L2Q3SX64 289 aa10.56□□□□□ -0.72
PRPF38B-204ENST00000467302 TEX49A0A1B0GTD5 131 aa10.55□□□□□ -0.72
PRPF38B-204ENST00000467302 H7C423 109 aa10.55□□□□□ -0.72
PRPF38B-204ENST00000467302 IL17DQ8TAD2 202 aa10.55□□□□□ -0.72
PRPF38B-204ENST00000467302 NOTCH2Q04721 2471 aa10.55□□□□□ -0.72
PRPF38B-204ENST00000467302 IGLV5-39A0A0G2JS06 123 aa10.55□□□□□ -0.72
PRPF38B-204ENST00000467302 INAFM1C9JVW0 142 aa10.55□□□□□ -0.72
PRPF38B-204ENST00000467302 COX6A2Q02221 97 aa10.55□□□□□ -0.72
PRPF38B-204ENST00000467302 STHQ8IWL8 128 aa10.55□□□□□ -0.72
PRPF38B-204ENST00000467302 SETD2Q9BYW2 2564 aaPredicted RBP10.54□□□□□ -0.72
PRPF38B-204ENST00000467302 COX6CP09669 75 aa10.54□□□□□ -0.72
PRPF38B-204ENST00000467302 OTOGQ6ZRI0 2925 aa10.54□□□□□ -0.72
PRPF38B-204ENST00000467302 LST1O00453 97 aa10.53□□□□□ -0.72
PRPF38B-204ENST00000467302 CMC4P56277 68 aaPredicted RBP10.53□□□□□ -0.72
PRPF38B-204ENST00000467302 LINC00242Q5T6M2 205 aa10.53□□□□□ -0.72
PRPF38B-204ENST00000467302 FAM19A3Q7Z5A8 133 aa10.53□□□□□ -0.72
PRPF38B-204ENST00000467302 DAND5Q8N907 189 aa10.53□□□□□ -0.72
PRPF38B-204ENST00000467302 WNK1Q9H4A3 2382 aa10.53□□□□□ -0.72
PRPF38B-204ENST00000467302 H3BT86 120 aa10.53□□□□□ -0.72
PRPF38B-204ENST00000467302 DGAT2L7PQ6IED9 249 aa10.53□□□□□ -0.72
PRPF38B-204ENST00000467302 C2orf82Q6UX34 121 aa10.53□□□□□ -0.72
PRPF38B-204ENST00000467302 C1orf158Q8N1D5 194 aa10.53□□□□□ -0.72
PRPF38B-204ENST00000467302 XCL2Q9UBD3 114 aa10.53□□□□□ -0.72
PRPF38B-204ENST00000467302 TRAV26-1A0A087WT03 109 aa10.52□□□□□ -0.73
PRPF38B-204ENST00000467302 HERVK_113P63121 156 aa10.52□□□□□ -0.73
PRPF38B-204ENST00000467302 CLEC2BQ92478 149 aa10.52□□□□□ -0.73
PRPF38B-204ENST00000467302 UBE2WQ96B02 151 aa10.52□□□□□ -0.73
PRPF38B-204ENST00000467302 LINC00694P0DN24 101 aa10.51□□□□□ -0.73
PRPF38B-204ENST00000467302 CSDC2Q9Y534 153 aaKnown RBP10.51□□□□□ -0.73
PRPF38B-204ENST00000467302 IGLV1-51P01701 117 aa10.51□□□□□ -0.73
PRPF38B-204ENST00000467302 CIRBPQ14011 172 aaKnown RBP10.5□□□□□ -0.73
PRPF38B-204ENST00000467302 LINC00308Q8TCZ7 52 aa10.5□□□□□ -0.73
PRPF38B-204ENST00000467302 Q9H8V8 135 aa10.5□□□□□ -0.73
PRPF38B-204ENST00000467302 TRAV8-4A0A0B4J246 113 aa10.5□□□□□ -0.73
PRPF38B-204ENST00000467302 CRLF1O75462 422 aa10.5□□□□□ -0.73
PRPF38B-204ENST00000467302 KRTAP10-3P60369 221 aa10.5□□□□□ -0.73
PRPF38B-204ENST00000467302 NTM-AS1Q6ZSK4 140 aa10.5□□□□□ -0.73
PRPF38B-204ENST00000467302 TRGV1A0A0A0MS02 117 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms