RNA–Protein interactions for RNA: ENST00000467288.6

GMDS-203, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 5

Gene GMDS, Length 900 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-203ENST00000467288 C15orf56Q8N910 161 aa12.51□□□□□ -0.41
GMDS-203ENST00000467288 TMEM101Q96IK0 257 aa12.51□□□□□ -0.41
GMDS-203ENST00000467288 A0A1B0GXF2 115 aa12.5□□□□□ -0.41
GMDS-203ENST00000467288 PPP1R2P9O14990 202 aa12.5□□□□□ -0.41
GMDS-203ENST00000467288 AP5S1Q9NUS5 200 aa12.5□□□□□ -0.41
GMDS-203ENST00000467288 S100A8P05109 93 aa12.49□□□□□ -0.41
GMDS-203ENST00000467288 RAB14P61106 215 aa12.49□□□□□ -0.41
GMDS-203ENST00000467288 MRPL54Q6P161 138 aaKnown RBP12.49□□□□□ -0.41
GMDS-203ENST00000467288 CFAP161Q6P656 301 aa12.49□□□□□ -0.41
GMDS-203ENST00000467288 CDC42SE2Q9NRR3 84 aa12.49□□□□□ -0.41
GMDS-203ENST00000467288 TRBV24-1A0A075B6N3 115 aa12.48□□□□□ -0.41
GMDS-203ENST00000467288 LINC00959A0A1B0GUT2 108 aa12.48□□□□□ -0.41
GMDS-203ENST00000467288 J3QL48 77 aa12.48□□□□□ -0.41
GMDS-203ENST00000467288 FCER1GP30273 86 aa12.48□□□□□ -0.41
GMDS-203ENST00000467288 HBBP68871 147 aa12.48□□□□□ -0.41
GMDS-203ENST00000467288 FOXI1Q12951 378 aa12.48□□□□□ -0.41
GMDS-203ENST00000467288 C20orf78Q9BR46 151 aa12.48□□□□□ -0.41
GMDS-203ENST00000467288 CKS2P33552 79 aa12.47□□□□□ -0.41
GMDS-203ENST00000467288 RPL32P62910 135 aaKnown RBP12.47□□□□□ -0.41
GMDS-203ENST00000467288 KIR2DL4Q99706 377 aa12.47□□□□□ -0.41
GMDS-203ENST00000467288 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.47□□□□□ -0.41
GMDS-203ENST00000467288 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.46□□□□□ -0.41
GMDS-203ENST00000467288 F8W036 122 aa12.46□□□□□ -0.41
GMDS-203ENST00000467288 PNRC1Q12796 327 aaPredicted RBP12.46□□□□□ -0.41
GMDS-203ENST00000467288 ZNF664Q8N3J9 261 aa12.46□□□□□ -0.41
GMDS-203ENST00000467288 CSDC2Q9Y534 153 aaKnown RBP12.46□□□□□ -0.41
GMDS-203ENST00000467288 PANO1I0J062 215 aa12.45□□□□□ -0.42
GMDS-203ENST00000467288 CCL25O15444 150 aa12.45□□□□□ -0.42
GMDS-203ENST00000467288 TNFRSF6BO95407 300 aa12.45□□□□□ -0.42
GMDS-203ENST00000467288 KRTAP10-4P60372 401 aaPredicted RBP12.45□□□□□ -0.42
GMDS-203ENST00000467288 IGHV3-64A0A075B6Q5 118 aa12.44□□□□□ -0.42
GMDS-203ENST00000467288 GVQW2A0A096LPI5 108 aaPredicted RBP12.44□□□□□ -0.42
GMDS-203ENST00000467288 XCL1P47992 114 aa12.44□□□□□ -0.42
GMDS-203ENST00000467288 CIRBPQ14011 172 aaKnown RBP12.44□□□□□ -0.42
GMDS-203ENST00000467288 CLLU1Q5K131 121 aa12.44□□□□□ -0.42
GMDS-203ENST00000467288 ATP5L2Q7Z4Y8 100 aa12.44□□□□□ -0.42
GMDS-203ENST00000467288 UBE2D4Q9Y2X8 147 aa12.44□□□□□ -0.42
GMDS-203ENST00000467288 D6R8Y8 96 aa12.43□□□□□ -0.42
GMDS-203ENST00000467288 PPBPP02775 128 aa12.43□□□□□ -0.42
GMDS-203ENST00000467288 SMAGPQ0VAQ4 97 aa12.43□□□□□ -0.42
GMDS-203ENST00000467288 SS18Q15532 418 aa12.43□□□□□ -0.42
GMDS-203ENST00000467288 HIGD2BQ4VC39 106 aa12.43□□□□□ -0.42
GMDS-203ENST00000467288 PHOX2AO14813 284 aa12.42□□□□□ -0.42
GMDS-203ENST00000467288 ANAPC16Q96DE5 110 aa12.42□□□□□ -0.42
GMDS-203ENST00000467288 TIMM21Q9BVV7 248 aa12.42□□□□□ -0.42
GMDS-203ENST00000467288 SMIM2Q9BVW6 85 aa12.42□□□□□ -0.42
GMDS-203ENST00000467288 TCAPO15273 167 aa12.41□□□□□ -0.42
GMDS-203ENST00000467288 NPYP01303 97 aa12.41□□□□□ -0.42
GMDS-203ENST00000467288 CD164L2Q6UWJ8 174 aa12.41□□□□□ -0.42
GMDS-203ENST00000467288 IGHV1-58A0A0C4DH39 117 aa12.4□□□□□ -0.42
GMDS-203ENST00000467288 MT-ND4LP03901 98 aa12.4□□□□□ -0.42
GMDS-203ENST00000467288 TMEM18Q96B42 140 aa12.4□□□□□ -0.42
GMDS-203ENST00000467288 C1orf196B1AJZ1 125 aa12.38□□□□□ -0.43
GMDS-203ENST00000467288 IFITM2Q01629 132 aa12.38□□□□□ -0.43
GMDS-203ENST00000467288 Q6ZUT4 128 aa12.38□□□□□ -0.43
GMDS-203ENST00000467288 ORMDL3Q8N138 153 aa12.38□□□□□ -0.43
GMDS-203ENST00000467288 KRTAP29-1A8MX34 341 aaPredicted RBP12.37□□□□□ -0.43
GMDS-203ENST00000467288 CHTF8P0CG12 524 aa12.37□□□□□ -0.43
GMDS-203ENST00000467288 RNASE13Q5GAN3 156 aaKnown RBP12.37□□□□□ -0.43
GMDS-203ENST00000467288 TMEM136Q6ZRR5 245 aa12.37□□□□□ -0.43
GMDS-203ENST00000467288 SPACA4Q8TDM5 124 aa12.37□□□□□ -0.43
GMDS-203ENST00000467288 LRP1Q07954 4544 aaKnown RBP12.37□□□□□ -0.43
GMDS-203ENST00000467288 RPL39P62891 51 aaKnown RBP12.36□□□□□ -0.43
GMDS-203ENST00000467288 COX6A2Q02221 97 aa12.36□□□□□ -0.43
GMDS-203ENST00000467288 PRELID3AQ96N28 172 aa12.36□□□□□ -0.43
GMDS-203ENST00000467288 RPL37AP61513 92 aaKnown RBP12.35□□□□□ -0.43
GMDS-203ENST00000467288 FAM104AQ969W3 186 aa12.35□□□□□ -0.43
GMDS-203ENST00000467288 HMCN2Q8NDA2 5059 aa12.34□□□□□ -0.43
GMDS-203ENST00000467288 A0A087WYN8 130 aa12.34□□□□□ -0.43
GMDS-203ENST00000467288 PRSS47A8MTI9 375 aa12.34□□□□□ -0.43
GMDS-203ENST00000467288 UQCC3Q6UW78 93 aa12.34□□□□□ -0.43
GMDS-203ENST00000467288 PRSS3P2Q8NHM4 247 aa12.34□□□□□ -0.43
GMDS-203ENST00000467288 LINC00526Q96FQ7 95 aa12.34□□□□□ -0.43
GMDS-203ENST00000467288 SPANXA1Q9NS26 97 aa12.34□□□□□ -0.43
GMDS-203ENST00000467288 TRAV13-1A0A0B4J241 112 aa12.33□□□□□ -0.44
GMDS-203ENST00000467288 DPH3Q96FX2 82 aa12.33□□□□□ -0.44
GMDS-203ENST00000467288 LAMTOR2Q9Y2Q5 125 aa12.33□□□□□ -0.44
GMDS-203ENST00000467288 COX7A2LO14548 114 aa12.32□□□□□ -0.44
GMDS-203ENST00000467288 ADCYAP1P18509 176 aa12.32□□□□□ -0.44
GMDS-203ENST00000467288 MRPS36P82909 103 aaKnown RBP12.32□□□□□ -0.44
GMDS-203ENST00000467288 PLAC8Q9NZF1 115 aa12.32□□□□□ -0.44
GMDS-203ENST00000467288 TMEM218A2RU14 115 aa12.31□□□□□ -0.44
GMDS-203ENST00000467288 ZNF561-AS1K7EIQ3 104 aa12.31□□□□□ -0.44
GMDS-203ENST00000467288 RAB5AP20339 215 aa12.3□□□□□ -0.44
GMDS-203ENST00000467288 MALP21145 153 aa12.3□□□□□ -0.44
GMDS-203ENST00000467288 CARD19Q96LW7 228 aa12.3□□□□□ -0.44
GMDS-203ENST00000467288 IMMP2LQ96T52 175 aa12.3□□□□□ -0.44
GMDS-203ENST00000467288 OPRPNQ99935 248 aaPredicted RBP12.3□□□□□ -0.44
GMDS-203ENST00000467288 SYCNQ0VAF6 134 aa12.29□□□□□ -0.44
GMDS-203ENST00000467288 MAP1LC3AQ9H492 121 aa12.29□□□□□ -0.44
GMDS-203ENST00000467288 A0A096LNI7 61 aa12.28□□□□□ -0.44
GMDS-203ENST00000467288 IGKV2-24A0A0C4DH68 120 aa12.28□□□□□ -0.44
GMDS-203ENST00000467288 MAJINQ3KP22 176 aa12.28□□□□□ -0.44
GMDS-203ENST00000467288 C5orf38Q86SI9 138 aa12.28□□□□□ -0.44
GMDS-203ENST00000467288 PKIGQ9Y2B9 76 aa12.28□□□□□ -0.44
GMDS-203ENST00000467288 PYGO1Q9Y3Y4 419 aa12.28□□□□□ -0.44
GMDS-203ENST00000467288 FAT3Q8TDW7 4589 aa12.28□□□□□ -0.44
GMDS-203ENST00000467288 UBR4Q5T4S7 5183 aa12.28□□□□□ -0.44
GMDS-203ENST00000467288 IGLV4-69A0A075B6H9 119 aa12.27□□□□□ -0.45
GMDS-203ENST00000467288 LOC389332A0A1B0GUA5 103 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms