RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 RTL8CO15255 209 aa10.72□□□□□ -0.69
GPC1-207ENST00000466624 REG3AQ06141 175 aa10.72□□□□□ -0.69
GPC1-207ENST00000466624 DGAT2L7PQ6IED9 249 aa10.72□□□□□ -0.69
GPC1-207ENST00000466624 C2orf66Q6UXQ4 117 aa10.72□□□□□ -0.69
GPC1-207ENST00000466624 URB1-AS1Q96HZ7 61 aa10.72□□□□□ -0.69
GPC1-207ENST00000466624 CDC42SE2Q9NRR3 84 aa10.72□□□□□ -0.69
GPC1-207ENST00000466624 AP5S1Q9NUS5 200 aa10.72□□□□□ -0.69
GPC1-207ENST00000466624 COX11Q9Y6N1 276 aa10.72□□□□□ -0.69
GPC1-207ENST00000466624 NPSP0C0P6 89 aa10.71□□□□□ -0.69
GPC1-207ENST00000466624 LINC00614P0C842 121 aa10.71□□□□□ -0.69
GPC1-207ENST00000466624 LINC00336Q6ZUF6 198 aa10.71□□□□□ -0.69
GPC1-207ENST00000466624 ZNF664Q8N3J9 261 aa10.71□□□□□ -0.69
GPC1-207ENST00000466624 TM2D2Q9BX73 214 aa10.71□□□□□ -0.69
GPC1-207ENST00000466624 Q9HAA7 133 aa10.71□□□□□ -0.69
GPC1-207ENST00000466624 TRAV8-4A0A0B4J246 113 aa10.7□□□□□ -0.7
GPC1-207ENST00000466624 MRPS36P82909 103 aaKnown RBP10.7□□□□□ -0.7
GPC1-207ENST00000466624 TOMM6Q96B49 74 aa10.7□□□□□ -0.7
GPC1-207ENST00000466624 CHCHD1Q96BP2 118 aaKnown RBP10.69□□□□□ -0.7
GPC1-207ENST00000466624 CLPSL2Q6UWE3 100 aa10.68□□□□□ -0.7
GPC1-207ENST00000466624 C1orf43Q9BWL3 253 aa10.68□□□□□ -0.7
GPC1-207ENST00000466624 FAT2Q9NYQ8 4349 aa10.68□□□□□ -0.7
GPC1-207ENST00000466624 Q6ZUT4 128 aa10.67□□□□□ -0.7
GPC1-207ENST00000466624 FAM104AQ969W3 186 aa10.67□□□□□ -0.7
GPC1-207ENST00000466624 TIMM17AQ99595 171 aa10.67□□□□□ -0.7
GPC1-207ENST00000466624 IGKV2D-24A0A075B6R9 120 aa10.66□□□□□ -0.7
GPC1-207ENST00000466624 IGIPA6NJ69 53 aa10.66□□□□□ -0.7
GPC1-207ENST00000466624 CCL25O15444 150 aa10.66□□□□□ -0.7
GPC1-207ENST00000466624 ERASQ7Z444 233 aa10.66□□□□□ -0.7
GPC1-207ENST00000466624 BAGE3Q86Y29 109 aa10.66□□□□□ -0.7
GPC1-207ENST00000466624 IGLV4-3A0A075B6K6 122 aa10.65□□□□□ -0.7
GPC1-207ENST00000466624 A0A096LNJ9 63 aa10.65□□□□□ -0.7
GPC1-207ENST00000466624 PSCAO43653 123 aa10.65□□□□□ -0.7
GPC1-207ENST00000466624 HBDP02042 147 aa10.65□□□□□ -0.7
GPC1-207ENST00000466624 PAPPA-AS1Q5QFB9 102 aa10.65□□□□□ -0.7
GPC1-207ENST00000466624 TMEM141Q96I45 108 aa10.65□□□□□ -0.7
GPC1-207ENST00000466624 LINC00959A0A1B0GUT2 108 aa10.64□□□□□ -0.71
GPC1-207ENST00000466624 PRSS29PA6NIE9 313 aa10.64□□□□□ -0.71
GPC1-207ENST00000466624 HIST1H2BKO60814 126 aa10.64□□□□□ -0.71
GPC1-207ENST00000466624 HIST1H2BJP06899 126 aa10.64□□□□□ -0.71
GPC1-207ENST00000466624 HIST1H2BOP23527 126 aa10.64□□□□□ -0.71
GPC1-207ENST00000466624 HIST1H2BBP33778 126 aa10.64□□□□□ -0.71
GPC1-207ENST00000466624 HIST1H2BDP58876 126 aa10.64□□□□□ -0.71
GPC1-207ENST00000466624 HIST1H2BCP62807 126 aa10.64□□□□□ -0.71
GPC1-207ENST00000466624 HIST2H2BEQ16778 126 aa10.64□□□□□ -0.71
GPC1-207ENST00000466624 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.64□□□□□ -0.71
GPC1-207ENST00000466624 KRTAP26-1Q6PEX3 210 aa10.64□□□□□ -0.71
GPC1-207ENST00000466624 HIST1H2BHQ93079 126 aa10.64□□□□□ -0.71
GPC1-207ENST00000466624 HIST1H2BNQ99877 126 aa10.64□□□□□ -0.71
GPC1-207ENST00000466624 HIST1H2BMQ99879 126 aa10.64□□□□□ -0.71
GPC1-207ENST00000466624 IGKV3OR2-268A0A0C4DH90 116 aa10.63□□□□□ -0.71
GPC1-207ENST00000466624 SS18Q15532 418 aa10.63□□□□□ -0.71
GPC1-207ENST00000466624 Q6ZN92 141 aa10.63□□□□□ -0.71
GPC1-207ENST00000466624 SCGB3A1Q96QR1 104 aa10.63□□□□□ -0.71
GPC1-207ENST00000466624 OPRPNQ99935 248 aaPredicted RBP10.63□□□□□ -0.71
GPC1-207ENST00000466624 IGLV10-54A0A075B6I4 117 aa10.62□□□□□ -0.71
GPC1-207ENST00000466624 C1orf196B1AJZ1 125 aa10.62□□□□□ -0.71
GPC1-207ENST00000466624 HSBP1O75506 76 aa10.62□□□□□ -0.71
GPC1-207ENST00000466624 TNP2Q05952 138 aa10.62□□□□□ -0.71
GPC1-207ENST00000466624 PDZD11Q5EBL8 140 aa10.62□□□□□ -0.71
GPC1-207ENST00000466624 RNASE13Q5GAN3 156 aaKnown RBP10.62□□□□□ -0.71
GPC1-207ENST00000466624 TEX43Q6ZNM6 134 aa10.62□□□□□ -0.71
GPC1-207ENST00000466624 CHCHD10Q8WYQ3 142 aaPredicted RBP10.62□□□□□ -0.71
GPC1-207ENST00000466624 AMELXQ99217 191 aa10.62□□□□□ -0.71
GPC1-207ENST00000466624 SERF1AO75920 110 aa10.61□□□□□ -0.71
GPC1-207ENST00000466624 LINC00310P59036 64 aa10.61□□□□□ -0.71
GPC1-207ENST00000466624 MAPKAPK5-AS1Q8N8E1 139 aa10.61□□□□□ -0.71
GPC1-207ENST00000466624 LRCOL1A6NCL2 159 aa10.6□□□□□ -0.71
GPC1-207ENST00000466624 IFITM10A6NMD0 228 aa10.6□□□□□ -0.71
GPC1-207ENST00000466624 PMCHL1Q16048 86 aa10.6□□□□□ -0.71
GPC1-207ENST00000466624 LINC00173Q6ZV60 143 aa10.6□□□□□ -0.71
GPC1-207ENST00000466624 C2orf88Q9BSF0 95 aa10.6□□□□□ -0.71
GPC1-207ENST00000466624 VCX2Q9H322 139 aa10.6□□□□□ -0.71
GPC1-207ENST00000466624 A0A087WTM6 91 aa10.59□□□□□ -0.71
GPC1-207ENST00000466624 TRAV13-1A0A0B4J241 112 aa10.59□□□□□ -0.71
GPC1-207ENST00000466624 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.59□□□□□ -0.71
GPC1-207ENST00000466624 CD164L2Q6UWJ8 174 aa10.59□□□□□ -0.71
GPC1-207ENST00000466624 DNAH11Q96DT5 4516 aa10.58□□□□□ -0.72
GPC1-207ENST00000466624 GAGE12HA6NDE8 117 aa10.58□□□□□ -0.72
GPC1-207ENST00000466624 EREGO14944 169 aa10.58□□□□□ -0.72
GPC1-207ENST00000466624 ATP5LO75964 103 aa10.58□□□□□ -0.72
GPC1-207ENST00000466624 PKD1P98161 4303 aa10.57□□□□□ -0.72
GPC1-207ENST00000466624 A0A1B0GVY2 172 aa10.57□□□□□ -0.72
GPC1-207ENST00000466624 XCL1P47992 114 aa10.57□□□□□ -0.72
GPC1-207ENST00000466624 UBE2D1P51668 147 aa10.57□□□□□ -0.72
GPC1-207ENST00000466624 FOXI1Q12951 378 aa10.57□□□□□ -0.72
GPC1-207ENST00000466624 COA6Q5JTJ3 125 aaKnown RBP10.57□□□□□ -0.72
GPC1-207ENST00000466624 FAM19A3Q7Z5A8 133 aa10.57□□□□□ -0.72
GPC1-207ENST00000466624 NUPR1O60356 82 aa10.56□□□□□ -0.72
GPC1-207ENST00000466624 FAM19A2Q8N3H0 131 aa10.56□□□□□ -0.72
GPC1-207ENST00000466624 BAALCQ8WXS3 180 aa10.56□□□□□ -0.72
GPC1-207ENST00000466624 PMVKQ15126 192 aa10.55□□□□□ -0.72
GPC1-207ENST00000466624 C14orf177Q52M58 125 aa10.55□□□□□ -0.72
GPC1-207ENST00000466624 SEC11AP67812 179 aa10.54□□□□□ -0.72
GPC1-207ENST00000466624 WFDC2Q14508 124 aa10.54□□□□□ -0.72
GPC1-207ENST00000466624 LINC00242Q5T6M2 205 aa10.54□□□□□ -0.72
GPC1-207ENST00000466624 ZC2HC1BQ5TFG8 222 aa10.54□□□□□ -0.72
GPC1-207ENST00000466624 Q8N814 137 aa10.54□□□□□ -0.72
GPC1-207ENST00000466624 IGHV3OR16-9A0A0B4J2B5 98 aa10.53□□□□□ -0.72
GPC1-207ENST00000466624 USP17L23D6RBM5 183 aa10.53□□□□□ -0.72
GPC1-207ENST00000466624 LEPROTL1O95214 131 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms