RNA–Protein interactions for RNA: ENST00000466471.1

SORT1-202, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 521 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-202ENST00000466471 LYZL6O75951 148 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 DUSP14O95147 198 aaKnown RBP2.51□□□□□ -2.01
SORT1-202ENST00000466471 BRI3O95415 125 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 TCL1BO95988 128 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 IGHV3-33P01772 117 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 TFF1P04155 84 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 CRYGDP07320 174 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 ZNF80P51504 273 aaPredicted RBP2.51□□□□□ -2.01
SORT1-202ENST00000466471 DIAPH2-AS1Q14236 149 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 HES1Q14469 280 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 ZNF876PQ49A33 203 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 C10orf55Q5SWW7 151 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 ZFP2Q6ZN57 461 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 GPHB5Q86YW7 130 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 ANKRD29Q8N6D5 301 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 C10orf105Q8TEF2 133 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 TMEM263Q8WUH6 116 aaKnown RBP2.51□□□□□ -2.01
SORT1-202ENST00000466471 DNAJC30Q96LL9 226 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 LINC01587Q99440 93 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 SMIM2Q9BVW6 85 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 TTTY13Q9BZ97 58 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 EDA2RQ9HAV5 297 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 PRO1854Q9UHT4 67 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 UFC1Q9Y3C8 167 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 SMAD5-AS1Q9Y6J3 95 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 HMCN2Q8NDA2 5059 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 MYCBP2O75592 4640 aa2.51□□□□□ -2.01
SORT1-202ENST00000466471 DNAH11Q96DT5 4516 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 ARFGEF3Q5TH69 2177 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 IGLV4-69A0A075B6H9 119 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 TRAV16A0A0A6YYK6 109 aaPredicted RBP2.5□□□□□ -2.01
SORT1-202ENST00000466471 A0A0J9YXY3 114 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 OOSP1A8MZH6 123 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 M0R3E3 92 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 GAS8-AS1O95177 125 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 IGHV1-69P01742 117 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 IGHV1-8P0DP01 117 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 CXCL5P42830 114 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 POLR2KP53803 58 aaKnown RBP2.5□□□□□ -2.01
SORT1-202ENST00000466471 LYZP61626 148 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 HCP5Q6MZN7 132 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 C5orf38Q86SI9 138 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 SMIM29Q86T20 159 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 C15orf53Q8NAA6 179 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 C9orf106Q8NAJ2 232 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 LY6G5BQ8NDX9 201 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 BAALCQ8WXS3 180 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 LEAP2Q969E1 77 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 FAM19A4Q96LR4 140 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 CCL13Q99616 98 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 B9D2Q9BPU9 175 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 PRADC1Q9BSG0 188 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 SS18L2Q9UHA2 77 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 KIF25-AS1Q9Y6Z4 181 aa2.5□□□□□ -2.01
SORT1-202ENST00000466471 DYNC1H1Q14204 4646 aaKnown RBP2.49□□□□□ -2.01
SORT1-202ENST00000466471 TRAV4A0A0B4J268 109 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 LOC100131303A0A0U1RQF7 123 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 ZNF815PA8K554 130 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 SMKR1H3BMG3 65 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 BUB1B-PAK6H3BSN5 160 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 CCDC179H3BU77 68 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 K7EIL1 84 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 TIMM17BO60830 172 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 SNCGO76070 127 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 CTSGP08311 255 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 LINC00315P59091 139 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 HERVK_113P61574 105 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 HIST1H4AP62805 103 aaKnown RBP2.49□□□□□ -2.01
SORT1-202ENST00000466471 TNFAIP6P98066 277 aaPredicted RBP2.49□□□□□ -2.01
SORT1-202ENST00000466471 PMVKQ15126 192 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 ATXN8Q156A1 80 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 TTC32Q5I0X7 151 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 TMEM170BQ5T4T1 132 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 ADAMTSL4-AS1Q5T5F5 129 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 DUX4L9Q6RFH8 374 aaPredicted RBP2.49□□□□□ -2.01
SORT1-202ENST00000466471 Q6ZRP5 223 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 Q8N6K4 173 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 FAM216BQ8N7L0 139 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 ZNRF2Q8NHG8 242 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 LINC00526Q96FQ7 95 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 PRAC1Q96KF2 57 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 LINC00477Q96M19 166 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 SCGB3A1Q96QR1 104 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 AGPAT4-IT1Q9H0P7 198 aa2.49□□□□□ -2.01
SORT1-202ENST00000466471 TET2Q6N021 2002 aaPredicted RBP2.49□□□□□ -2.01
SORT1-202ENST00000466471 RNF213Q63HN8 5207 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 IGLV4-3A0A075B6K6 122 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 TRAV8-2A0A0B4J237 113 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 TRAV26-2A0A0B4J265 109 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 IGHV3-64DA0A0J9YX35 117 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 TRBV27A0A0K0K1C4 114 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 TMEM223A0PJW6 202 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 UQCRQO14949 82 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 LEPROTO15243 131 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 NDUFB3O43676 98 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 CRYGAP11844 174 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 CCL3L1P16619 93 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 ZNF22P17026 224 aaPredicted RBP2.48□□□□□ -2.01
SORT1-202ENST00000466471 PSMB2P49721 201 aa2.48□□□□□ -2.01
SORT1-202ENST00000466471 FXYD7P58549 80 aa2.48□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms