RNA–Protein interactions for RNA: ENST00000466373.1

UFD1-206, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 2

Gene UFD1, Length 3,059 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-206ENST00000466373 ADAMTSL4-AS1Q5T5F5 129 aa7.49□□□□□ -1.21
UFD1-206ENST00000466373 GEMIN7Q9H840 131 aaKnown RBP7.49□□□□□ -1.21
UFD1-206ENST00000466373 NDUFA12Q9UI09 145 aa7.49□□□□□ -1.21
UFD1-206ENST00000466373 HECTD1Q9ULT8 2610 aa7.49□□□□□ -1.21
UFD1-206ENST00000466373 IGHV1-58A0A0C4DH39 117 aa7.49□□□□□ -1.21
UFD1-206ENST00000466373 SPANXA1Q9NS26 97 aa7.49□□□□□ -1.21
UFD1-206ENST00000466373 LINC00694P0DN24 101 aa7.48□□□□□ -1.21
UFD1-206ENST00000466373 RPL35AP18077 110 aaKnown RBP7.48□□□□□ -1.21
UFD1-206ENST00000466373 Q1RN00 199 aa7.48□□□□□ -1.21
UFD1-206ENST00000466373 PIK3CD-AS1Q5SR53 167 aa7.48□□□□□ -1.21
UFD1-206ENST00000466373 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.48□□□□□ -1.21
UFD1-206ENST00000466373 LINC01006Q8NI28 216 aa7.48□□□□□ -1.21
UFD1-206ENST00000466373 NOP10Q9NPE3 64 aaKnown RBP7.48□□□□□ -1.21
UFD1-206ENST00000466373 CDKN2A-AS1Q9UH64 79 aa7.48□□□□□ -1.21
UFD1-206ENST00000466373 J3QR89 54 aa7.48□□□□□ -1.21
UFD1-206ENST00000466373 DAND5Q8N907 189 aa7.48□□□□□ -1.21
UFD1-206ENST00000466373 VSIG2Q96IQ7 327 aa7.48□□□□□ -1.21
UFD1-206ENST00000466373 PLA2G2AP14555 144 aa7.48□□□□□ -1.21
UFD1-206ENST00000466373 TMEM263Q8WUH6 116 aaKnown RBP7.48□□□□□ -1.21
UFD1-206ENST00000466373 TINCRA0A1B0GVN0 87 aa7.47□□□□□ -1.21
UFD1-206ENST00000466373 GAGE12HA6NDE8 117 aa7.47□□□□□ -1.21
UFD1-206ENST00000466373 IGHV3-33P01772 117 aa7.47□□□□□ -1.21
UFD1-206ENST00000466373 GAGE12JA6NER3 117 aa7.47□□□□□ -1.21
UFD1-206ENST00000466373 COX6A2Q02221 97 aa7.47□□□□□ -1.21
UFD1-206ENST00000466373 GAGE4Q13068 117 aa7.47□□□□□ -1.21
UFD1-206ENST00000466373 GAGE5Q13069 117 aa7.47□□□□□ -1.21
UFD1-206ENST00000466373 DNAJC30Q96LL9 226 aa7.47□□□□□ -1.21
UFD1-206ENST00000466373 LITAFQ99732 161 aa7.47□□□□□ -1.21
UFD1-206ENST00000466373 ERG28Q9UKR5 140 aa7.47□□□□□ -1.21
UFD1-206ENST00000466373 TRAV25A0A0B4J276 109 aa7.46□□□□□ -1.21
UFD1-206ENST00000466373 A0A0U1RRA0 63 aa7.46□□□□□ -1.21
UFD1-206ENST00000466373 SMAGPQ0VAQ4 97 aa7.46□□□□□ -1.21
UFD1-206ENST00000466373 TRAV13-1A0A0B4J241 112 aa7.46□□□□□ -1.22
UFD1-206ENST00000466373 CRYBA4P53673 196 aa7.46□□□□□ -1.22
UFD1-206ENST00000466373 KRTAP1-1Q07627 177 aa7.46□□□□□ -1.22
UFD1-206ENST00000466373 LYRM7Q5U5X0 104 aa7.46□□□□□ -1.22
UFD1-206ENST00000466373 ZNF625Q96I27 306 aaPredicted RBP7.46□□□□□ -1.22
UFD1-206ENST00000466373 FOXI1Q12951 378 aa7.46□□□□□ -1.22
UFD1-206ENST00000466373 C1QTNF4Q9BXJ3 329 aa7.46□□□□□ -1.22
UFD1-206ENST00000466373 GIG44P09565 113 aaPredicted RBP7.45□□□□□ -1.22
UFD1-206ENST00000466373 NTM-AS1Q6ZSK4 140 aa7.45□□□□□ -1.22
UFD1-206ENST00000466373 K7EQD1 137 aa7.45□□□□□ -1.22
UFD1-206ENST00000466373 GAGE7O76087 117 aa7.45□□□□□ -1.22
UFD1-206ENST00000466373 GAGE12FP0CL80 117 aa7.45□□□□□ -1.22
UFD1-206ENST00000466373 GAGE12GP0CL81 117 aa7.45□□□□□ -1.22
UFD1-206ENST00000466373 GAGE12IP0CL82 117 aa7.45□□□□□ -1.22
UFD1-206ENST00000466373 RPL36AP83881 106 aaKnown RBP7.45□□□□□ -1.22
UFD1-206ENST00000466373 RPL36ALQ969Q0 106 aaKnown RBP7.45□□□□□ -1.22
UFD1-206ENST00000466373 TRGV2A0A075B6R0 118 aa7.44□□□□□ -1.22
UFD1-206ENST00000466373 LOC100131303A0A0U1RQF7 123 aa7.44□□□□□ -1.22
UFD1-206ENST00000466373 TMEM101Q96IK0 257 aa7.44□□□□□ -1.22
UFD1-206ENST00000466373 TRBV20-1A0A075B6N2 111 aa7.44□□□□□ -1.22
UFD1-206ENST00000466373 A0A0B4J2C4 111 aa7.44□□□□□ -1.22
UFD1-206ENST00000466373 C9JAW5 83 aa7.44□□□□□ -1.22
UFD1-206ENST00000466373 TEX29Q8N6K0 151 aa7.44□□□□□ -1.22
UFD1-206ENST00000466373 IL17DQ8TAD2 202 aa7.44□□□□□ -1.22
UFD1-206ENST00000466373 SIGMAR1Q99720 223 aa7.44□□□□□ -1.22
UFD1-206ENST00000466373 SMR3AQ99954 134 aa7.44□□□□□ -1.22
UFD1-206ENST00000466373 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.43□□□□□ -1.22
UFD1-206ENST00000466373 CLUHP3Q96NS8 147 aa7.43□□□□□ -1.22
UFD1-206ENST00000466373 LINC00242Q5T6M2 205 aa7.43□□□□□ -1.22
UFD1-206ENST00000466373 ZFAND6Q6FIF0 208 aa7.43□□□□□ -1.22
UFD1-206ENST00000466373 OTOGQ6ZRI0 2925 aa7.42□□□□□ -1.22
UFD1-206ENST00000466373 CARD19Q96LW7 228 aa7.42□□□□□ -1.22
UFD1-206ENST00000466373 TRAV4A0A0B4J268 109 aa7.42□□□□□ -1.22
UFD1-206ENST00000466373 TRIAP1O43715 76 aa7.42□□□□□ -1.22
UFD1-206ENST00000466373 RNASE1P07998 156 aaKnown RBP7.42□□□□□ -1.22
UFD1-206ENST00000466373 MIAQ16674 131 aa7.42□□□□□ -1.22
UFD1-206ENST00000466373 ANKRD29Q8N6D5 301 aa7.42□□□□□ -1.22
UFD1-206ENST00000466373 Q9H8V8 135 aa7.42□□□□□ -1.22
UFD1-206ENST00000466373 IGKV3OR2-268A0A0C4DH90 116 aa7.41□□□□□ -1.22
UFD1-206ENST00000466373 SLC25A20O43772 301 aa7.41□□□□□ -1.22
UFD1-206ENST00000466373 TEN1Q86WV5 123 aa7.41□□□□□ -1.22
UFD1-206ENST00000466373 PLAC8L1A1L4L8 177 aa7.41□□□□□ -1.22
UFD1-206ENST00000466373 SPATA25Q9BR10 227 aa7.41□□□□□ -1.22
UFD1-206ENST00000466373 TENM1Q9UKZ4 2725 aa7.41□□□□□ -1.22
UFD1-206ENST00000466373 IGLV1-51P01701 117 aa7.41□□□□□ -1.22
UFD1-206ENST00000466373 DAZ2Q13117 558 aaKnown RBP7.41□□□□□ -1.22
UFD1-206ENST00000466373 DAZ4Q86SG3 579 aaKnown RBP7.41□□□□□ -1.22
UFD1-206ENST00000466373 DAZ3Q9NR90 486 aaKnown RBP7.41□□□□□ -1.22
UFD1-206ENST00000466373 TRBV10-1A0A0K0K1A3 114 aa7.4□□□□□ -1.22
UFD1-206ENST00000466373 TIRAPP58753 221 aa7.4□□□□□ -1.22
UFD1-206ENST00000466373 SPANXDQ9BXN6 97 aa7.4□□□□□ -1.22
UFD1-206ENST00000466373 C19orf73Q9NVV2 129 aa7.4□□□□□ -1.22
UFD1-206ENST00000466373 SPANXCQ9NY87 97 aa7.4□□□□□ -1.22
UFD1-206ENST00000466373 UBE2L6O14933 153 aa7.4□□□□□ -1.23
UFD1-206ENST00000466373 HERVK_113P63121 156 aa7.4□□□□□ -1.23
UFD1-206ENST00000466373 ATP6V0E2Q8NHE4 81 aa7.4□□□□□ -1.23
UFD1-206ENST00000466373 IGLV5-45A0A087WSX0 123 aa7.39□□□□□ -1.23
UFD1-206ENST00000466373 TRGV4A0A0C4DH28 118 aa7.39□□□□□ -1.23
UFD1-206ENST00000466373 PPDPFLQ8WWR9 84 aa7.39□□□□□ -1.23
UFD1-206ENST00000466373 NDUFA1O15239 70 aa7.39□□□□□ -1.23
UFD1-206ENST00000466373 C16orf74Q96GX8 76 aa7.39□□□□□ -1.23
UFD1-206ENST00000466373 CDC42SE2Q9NRR3 84 aa7.39□□□□□ -1.23
UFD1-206ENST00000466373 SMIM1B2RUZ4 78 aa7.38□□□□□ -1.23
UFD1-206ENST00000466373 C16orf95Q9H693 158 aa7.38□□□□□ -1.23
UFD1-206ENST00000466373 ICOSQ9Y6W8 199 aa7.38□□□□□ -1.23
UFD1-206ENST00000466373 SBSPONQ8IVN8 264 aa7.38□□□□□ -1.23
UFD1-206ENST00000466373 CLEC2BQ92478 149 aa7.38□□□□□ -1.23
UFD1-206ENST00000466373 CDIP1Q9H305 208 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms