RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 GAGE12JA6NER3 117 aa3.79□□□□□ -1.8
VPS41-211ENST00000466017 IGIPA6NJ69 53 aa3.79□□□□□ -1.8
VPS41-211ENST00000466017 FABP4P15090 132 aa3.79□□□□□ -1.8
VPS41-211ENST00000466017 TCTAP57738 103 aa3.79□□□□□ -1.8
VPS41-211ENST00000466017 GAGE1Q13065 139 aa3.79□□□□□ -1.8
VPS41-211ENST00000466017 GAGE4Q13068 117 aa3.79□□□□□ -1.8
VPS41-211ENST00000466017 GAGE5Q13069 117 aa3.79□□□□□ -1.8
VPS41-211ENST00000466017 JOSD1Q15040 202 aaPredicted RBP3.79□□□□□ -1.8
VPS41-211ENST00000466017 PAPPA-AS1Q5QFB9 102 aa3.79□□□□□ -1.8
VPS41-211ENST00000466017 PET117Q6UWS5 81 aa3.79□□□□□ -1.8
VPS41-211ENST00000466017 C2orf66Q6UXQ4 117 aa3.79□□□□□ -1.8
VPS41-211ENST00000466017 NTM-AS1Q6ZSK4 140 aa3.79□□□□□ -1.8
VPS41-211ENST00000466017 Q6ZTC4 211 aa3.79□□□□□ -1.8
VPS41-211ENST00000466017 MRPL52Q86TS9 123 aaKnown RBP3.79□□□□□ -1.8
VPS41-211ENST00000466017 FAM19A2Q8N3H0 131 aa3.79□□□□□ -1.8
VPS41-211ENST00000466017 C15orf53Q8NAA6 179 aa3.79□□□□□ -1.8
VPS41-211ENST00000466017 OR10D4PQ8NGN7 298 aa3.79□□□□□ -1.8
VPS41-211ENST00000466017 TMEM141Q96I45 108 aa3.79□□□□□ -1.8
VPS41-211ENST00000466017 CHCHD7Q9BUK0 85 aa3.79□□□□□ -1.8
VPS41-211ENST00000466017 CYSLTR1Q9Y271 337 aa3.79□□□□□ -1.8
VPS41-211ENST00000466017 ICOSQ9Y6W8 199 aa3.79□□□□□ -1.8
VPS41-211ENST00000466017 MGAM2Q2M2H8 2515 aa3.79□□□□□ -1.8
VPS41-211ENST00000466017 TRBV25-1A0A075B6N4 114 aa3.78□□□□□ -1.8
VPS41-211ENST00000466017 DEFB131BA0A096LNP1 70 aa3.78□□□□□ -1.8
VPS41-211ENST00000466017 A0A096LPF7 62 aa3.78□□□□□ -1.8
VPS41-211ENST00000466017 TRAV12-1A0A0B4J245 112 aa3.78□□□□□ -1.8
VPS41-211ENST00000466017 A0A1B0GUV1 79 aa3.78□□□□□ -1.8
VPS41-211ENST00000466017 PKIAP61925 76 aa3.78□□□□□ -1.8
VPS41-211ENST00000466017 MRPS36P82909 103 aaKnown RBP3.78□□□□□ -1.8
VPS41-211ENST00000466017 LELP1Q5T871 98 aa3.78□□□□□ -1.8
VPS41-211ENST00000466017 NEGR1Q7Z3B1 354 aa3.78□□□□□ -1.8
VPS41-211ENST00000466017 IFI27L1Q96BM0 104 aa3.78□□□□□ -1.8
VPS41-211ENST00000466017 MAP1LC3CQ9BXW4 147 aa3.78□□□□□ -1.8
VPS41-211ENST00000466017 KRTAP1-5Q9BYS1 174 aa3.78□□□□□ -1.8
VPS41-211ENST00000466017 SPANXA1Q9NS26 97 aa3.78□□□□□ -1.8
VPS41-211ENST00000466017 PKD1L1Q8TDX9 2849 aa3.78□□□□□ -1.8
VPS41-211ENST00000466017 LOC100131303A0A0U1RQF7 123 aa3.77□□□□□ -1.81
VPS41-211ENST00000466017 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.77□□□□□ -1.81
VPS41-211ENST00000466017 SYS1-DBNDD2H3BUS1 97 aa3.77□□□□□ -1.81
VPS41-211ENST00000466017 C3orf79P0CE67 100 aa3.77□□□□□ -1.81
VPS41-211ENST00000466017 ZNF25P17030 456 aaPredicted RBP3.77□□□□□ -1.81
VPS41-211ENST00000466017 PMCHL1Q16048 86 aa3.77□□□□□ -1.81
VPS41-211ENST00000466017 LINC01545Q5VT33 79 aa3.77□□□□□ -1.81
VPS41-211ENST00000466017 LGALS9CQ6DKI2 356 aa3.77□□□□□ -1.81
VPS41-211ENST00000466017 MPLKIPQ8TAP9 179 aa3.77□□□□□ -1.81
VPS41-211ENST00000466017 PHLDA1Q8WV24 401 aaPredicted RBP3.77□□□□□ -1.81
VPS41-211ENST00000466017 SCGB3A1Q96QR1 104 aa3.77□□□□□ -1.81
VPS41-211ENST00000466017 AMELXQ99217 191 aa3.77□□□□□ -1.81
VPS41-211ENST00000466017 TMEM243Q9BU79 118 aa3.77□□□□□ -1.81
VPS41-211ENST00000466017 KRTAP2-2Q9BYT5 123 aa3.77□□□□□ -1.81
VPS41-211ENST00000466017 UBE2D4Q9Y2X8 147 aa3.77□□□□□ -1.81
VPS41-211ENST00000466017 IGHV3-38A0A0C4DH36 116 aa3.76□□□□□ -1.81
VPS41-211ENST00000466017 CCL25O15444 150 aa3.76□□□□□ -1.81
VPS41-211ENST00000466017 PYY3Q5JQD4 70 aa3.76□□□□□ -1.81
VPS41-211ENST00000466017 LYPD5Q6UWN5 251 aa3.76□□□□□ -1.81
VPS41-211ENST00000466017 Q6ZN92 141 aa3.76□□□□□ -1.81
VPS41-211ENST00000466017 FAM19A3Q7Z5A8 133 aa3.76□□□□□ -1.81
VPS41-211ENST00000466017 Q8N976 141 aa3.76□□□□□ -1.81
VPS41-211ENST00000466017 FAM104AQ969W3 186 aa3.76□□□□□ -1.81
VPS41-211ENST00000466017 CDC42SE2Q9NRR3 84 aa3.76□□□□□ -1.81
VPS41-211ENST00000466017 IGLV4-3A0A075B6K6 122 aa3.75□□□□□ -1.81
VPS41-211ENST00000466017 IGKV2D-30A0A075B6S6 120 aa3.75□□□□□ -1.81
VPS41-211ENST00000466017 A0A087WX48 190 aa3.75□□□□□ -1.81
VPS41-211ENST00000466017 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
VPS41-211ENST00000466017 A0A0J9YY99 117 aa3.75□□□□□ -1.81
VPS41-211ENST00000466017 C20orf202A1L168 122 aa3.75□□□□□ -1.81
VPS41-211ENST00000466017 PRSS1P07477 247 aa3.75□□□□□ -1.81
VPS41-211ENST00000466017 SMIM6P0DI80 62 aa3.75□□□□□ -1.81
VPS41-211ENST00000466017 FGF6P10767 208 aa3.75□□□□□ -1.81
VPS41-211ENST00000466017 HTN3P15516 51 aa3.75□□□□□ -1.81
VPS41-211ENST00000466017 RPL39P62891 51 aaKnown RBP3.75□□□□□ -1.81
VPS41-211ENST00000466017 PMVKQ15126 192 aa3.75□□□□□ -1.81
VPS41-211ENST00000466017 CEMP1Q6PRD7 247 aaPredicted RBP3.75□□□□□ -1.81
VPS41-211ENST00000466017 LINC00173Q6ZV60 143 aa3.75□□□□□ -1.81
VPS41-211ENST00000466017 BAALCQ8WXS3 180 aa3.75□□□□□ -1.81
VPS41-211ENST00000466017 VCX2Q9H322 139 aa3.75□□□□□ -1.81
VPS41-211ENST00000466017 NOTCH1P46531 2555 aa3.74□□□□□ -1.81
VPS41-211ENST00000466017 TRAV8-6A0A0B4J262 113 aa3.74□□□□□ -1.81
VPS41-211ENST00000466017 NUPR2A6NF83 97 aa3.74□□□□□ -1.81
VPS41-211ENST00000466017 F8VRH5 84 aa3.74□□□□□ -1.81
VPS41-211ENST00000466017 K7EP13 123 aa3.74□□□□□ -1.81
VPS41-211ENST00000466017 UBE2L6O14933 153 aa3.74□□□□□ -1.81
VPS41-211ENST00000466017 KRTDAPP60985 99 aa3.74□□□□□ -1.81
VPS41-211ENST00000466017 SEC11AP67812 179 aa3.74□□□□□ -1.81
VPS41-211ENST00000466017 ESRGQ1W209 222 aa3.74□□□□□ -1.81
VPS41-211ENST00000466017 DGAT2L7PQ6IED9 249 aa3.74□□□□□ -1.81
VPS41-211ENST00000466017 TEX43Q6ZNM6 134 aa3.74□□□□□ -1.81
VPS41-211ENST00000466017 NFE4Q86UQ8 179 aa3.74□□□□□ -1.81
VPS41-211ENST00000466017 LINC00518Q8N0U6 118 aa3.74□□□□□ -1.81
VPS41-211ENST00000466017 TMEM101Q96IK0 257 aa3.74□□□□□ -1.81
VPS41-211ENST00000466017 UPK3BQ9BT76 320 aa3.74□□□□□ -1.81
VPS41-211ENST00000466017 CST9LQ9H4G1 147 aa3.74□□□□□ -1.81
VPS41-211ENST00000466017 KLK5Q9Y337 293 aaPredicted RBP3.74□□□□□ -1.81
VPS41-211ENST00000466017 NBEAL1Q6ZS30 2694 aa3.73□□□□□ -1.81
VPS41-211ENST00000466017 NBEAL2Q6ZNJ1 2754 aa3.73□□□□□ -1.81
VPS41-211ENST00000466017 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.73□□□□□ -1.81
VPS41-211ENST00000466017 IGKV2-29A2NJV5 120 aaPredicted RBP3.73□□□□□ -1.81
VPS41-211ENST00000466017 SCGB1D1O95968 90 aa3.73□□□□□ -1.81
VPS41-211ENST00000466017 AMMECR1LQ6DCA0 310 aa3.73□□□□□ -1.81
VPS41-211ENST00000466017 LINC01561Q8N1V8 128 aa3.73□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms