RNA–Protein interactions for RNA: ENST00000463060.5

COL6A1-202, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 5

Gene COL6A1, Length 863 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-202ENST00000463060 OPRPNQ99935 248 aaPredicted RBP9.73□□□□□ -0.85
COL6A1-202ENST00000463060 Q9H8V8 135 aa9.73□□□□□ -0.85
COL6A1-202ENST00000463060 IGLV4-3A0A075B6K6 122 aa9.72□□□□□ -0.85
COL6A1-202ENST00000463060 SIVA1O15304 175 aa9.72□□□□□ -0.85
COL6A1-202ENST00000463060 SMAGPQ0VAQ4 97 aa9.72□□□□□ -0.85
COL6A1-202ENST00000463060 TMEM141Q96I45 108 aa9.72□□□□□ -0.85
COL6A1-202ENST00000463060 HIST1H2BLQ99880 126 aa9.72□□□□□ -0.85
COL6A1-202ENST00000463060 A0A087WX48 190 aa9.71□□□□□ -0.86
COL6A1-202ENST00000463060 LEPROTL1O95214 131 aa9.71□□□□□ -0.86
COL6A1-202ENST00000463060 AMMECR1LQ6DCA0 310 aa9.71□□□□□ -0.86
COL6A1-202ENST00000463060 ZNF664Q8N3J9 261 aa9.71□□□□□ -0.86
COL6A1-202ENST00000463060 OR5A1Q8NGJ0 315 aa9.71□□□□□ -0.86
COL6A1-202ENST00000463060 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.7□□□□□ -0.86
COL6A1-202ENST00000463060 ATP5LO75964 103 aa9.7□□□□□ -0.86
COL6A1-202ENST00000463060 FABP4P15090 132 aa9.7□□□□□ -0.86
COL6A1-202ENST00000463060 Q6ZUT4 128 aa9.7□□□□□ -0.86
COL6A1-202ENST00000463060 UBE2DNLQ8IWF7 75 aa9.7□□□□□ -0.86
COL6A1-202ENST00000463060 AMELXQ99217 191 aa9.7□□□□□ -0.86
COL6A1-202ENST00000463060 PRR34Q9NV39 138 aa9.7□□□□□ -0.86
COL6A1-202ENST00000463060 IGHV3-30P01768 117 aa9.69□□□□□ -0.86
COL6A1-202ENST00000463060 IGHV3-33P01772 117 aa9.69□□□□□ -0.86
COL6A1-202ENST00000463060 IGHV3-30-3P0DP02 117 aa9.69□□□□□ -0.86
COL6A1-202ENST00000463060 IGHV3-30-5P0DP03 117 aa9.69□□□□□ -0.86
COL6A1-202ENST00000463060 DGAT2L7PQ6IED9 249 aa9.69□□□□□ -0.86
COL6A1-202ENST00000463060 BAALCQ8WXS3 180 aa9.69□□□□□ -0.86
COL6A1-202ENST00000463060 LINC00476Q8WZB0 136 aa9.69□□□□□ -0.86
COL6A1-202ENST00000463060 IFI27L1Q96BM0 104 aa9.69□□□□□ -0.86
COL6A1-202ENST00000463060 TMEM101Q96IK0 257 aa9.69□□□□□ -0.86
COL6A1-202ENST00000463060 HSPB8Q9UJY1 196 aa9.69□□□□□ -0.86
COL6A1-202ENST00000463060 K7EP13 123 aa9.68□□□□□ -0.86
COL6A1-202ENST00000463060 ZC2HC1BQ5TFG8 222 aa9.68□□□□□ -0.86
COL6A1-202ENST00000463060 ENHOQ6UWT2 76 aa9.68□□□□□ -0.86
COL6A1-202ENST00000463060 ANGP03950 147 aaKnown RBP9.67□□□□□ -0.86
COL6A1-202ENST00000463060 S100A2P29034 98 aa9.67□□□□□ -0.86
COL6A1-202ENST00000463060 RNASE13Q5GAN3 156 aaKnown RBP9.67□□□□□ -0.86
COL6A1-202ENST00000463060 PAPPA-AS1Q5QFB9 102 aa9.67□□□□□ -0.86
COL6A1-202ENST00000463060 KRTAP1-5Q9BYS1 174 aa9.67□□□□□ -0.86
COL6A1-202ENST00000463060 CST9LQ9H4G1 147 aa9.67□□□□□ -0.86
COL6A1-202ENST00000463060 KLK12Q9UKR0 248 aa9.67□□□□□ -0.86
COL6A1-202ENST00000463060 IBA57-AS1B1ANH7 110 aa9.66□□□□□ -0.86
COL6A1-202ENST00000463060 SPATA12Q7Z6I5 190 aa9.66□□□□□ -0.86
COL6A1-202ENST00000463060 LINC00269Q8N2A0 174 aa9.66□□□□□ -0.86
COL6A1-202ENST00000463060 VCX2Q9H322 139 aa9.66□□□□□ -0.86
COL6A1-202ENST00000463060 TRAV12-1A0A0B4J245 112 aa9.65□□□□□ -0.86
COL6A1-202ENST00000463060 PRSS29PA6NIE9 313 aa9.65□□□□□ -0.86
COL6A1-202ENST00000463060 C3orf79P0CE67 100 aa9.65□□□□□ -0.86
COL6A1-202ENST00000463060 REG3AQ06141 175 aa9.65□□□□□ -0.86
COL6A1-202ENST00000463060 PMVKQ15126 192 aa9.65□□□□□ -0.86
COL6A1-202ENST00000463060 Q6ZN92 141 aa9.65□□□□□ -0.86
COL6A1-202ENST00000463060 FAM19A3Q7Z5A8 133 aa9.65□□□□□ -0.86
COL6A1-202ENST00000463060 KMT2AQ03164 3969 aa9.65□□□□□ -0.87
COL6A1-202ENST00000463060 NBDYA0A0U1RRE5 68 aa9.64□□□□□ -0.87
COL6A1-202ENST00000463060 LINC00959A0A1B0GUT2 108 aa9.64□□□□□ -0.87
COL6A1-202ENST00000463060 TEX43Q6ZNM6 134 aa9.64□□□□□ -0.87
COL6A1-202ENST00000463060 TRAV9-2A0A087WT02 112 aa9.63□□□□□ -0.87
COL6A1-202ENST00000463060 SYS1-DBNDD2H3BUS1 97 aa9.63□□□□□ -0.87
COL6A1-202ENST00000463060 LY6G6CO95867 125 aa9.63□□□□□ -0.87
COL6A1-202ENST00000463060 PRSS1P07477 247 aa9.63□□□□□ -0.87
COL6A1-202ENST00000463060 UBE2D1P51668 147 aa9.63□□□□□ -0.87
COL6A1-202ENST00000463060 Q6ZR54 194 aa9.63□□□□□ -0.87
COL6A1-202ENST00000463060 C10orf126Q8N4M7 172 aa9.63□□□□□ -0.87
COL6A1-202ENST00000463060 MAP1LC3CQ9BXW4 147 aa9.63□□□□□ -0.87
COL6A1-202ENST00000463060 CCL25O15444 150 aa9.62□□□□□ -0.87
COL6A1-202ENST00000463060 ODF1Q14990 250 aa9.62□□□□□ -0.87
COL6A1-202ENST00000463060 KRTAP26-1Q6PEX3 210 aa9.62□□□□□ -0.87
COL6A1-202ENST00000463060 MIAQ16674 131 aa9.61□□□□□ -0.87
COL6A1-202ENST00000463060 TTC32Q5I0X7 151 aa9.61□□□□□ -0.87
COL6A1-202ENST00000463060 CLPSL2Q6UWE3 100 aa9.61□□□□□ -0.87
COL6A1-202ENST00000463060 PET117Q6UWS5 81 aa9.61□□□□□ -0.87
COL6A1-202ENST00000463060 OR10D4PQ8NGN7 298 aa9.61□□□□□ -0.87
COL6A1-202ENST00000463060 UBE2WQ96B02 151 aa9.61□□□□□ -0.87
COL6A1-202ENST00000463060 SACSQ9NZJ4 4579 aa9.61□□□□□ -0.87
COL6A1-202ENST00000463060 IGLV4-69A0A075B6H9 119 aa9.6□□□□□ -0.87
COL6A1-202ENST00000463060 TRAV13-1A0A0B4J241 112 aa9.6□□□□□ -0.87
COL6A1-202ENST00000463060 TRAV8-4A0A0B4J246 113 aa9.6□□□□□ -0.87
COL6A1-202ENST00000463060 KRTDAPP60985 99 aa9.6□□□□□ -0.87
COL6A1-202ENST00000463060 LINC00242Q5T6M2 205 aa9.6□□□□□ -0.87
COL6A1-202ENST00000463060 LINC01545Q5VT33 79 aa9.6□□□□□ -0.87
COL6A1-202ENST00000463060 C2orf88Q9BSF0 95 aa9.6□□□□□ -0.87
COL6A1-202ENST00000463060 HYDINQ4G0P3 5121 aa9.6□□□□□ -0.87
COL6A1-202ENST00000463060 TRAV8-3A0A0A6YYJ7 113 aa9.59□□□□□ -0.87
COL6A1-202ENST00000463060 A0A0J9YXV3 536 aa9.59□□□□□ -0.87
COL6A1-202ENST00000463060 LCE6AA0A183 80 aa9.59□□□□□ -0.87
COL6A1-202ENST00000463060 COX6A2Q02221 97 aa9.59□□□□□ -0.87
COL6A1-202ENST00000463060 NFE4Q86UQ8 179 aa9.59□□□□□ -0.87
COL6A1-202ENST00000463060 MRPL35Q9NZE8 188 aaKnown RBP9.59□□□□□ -0.87
COL6A1-202ENST00000463060 CHTOPQ9Y3Y2 248 aaKnown RBP9.59□□□□□ -0.87
COL6A1-202ENST00000463060 IGKV3OR2-268A0A0C4DH90 116 aa9.58□□□□□ -0.88
COL6A1-202ENST00000463060 TINCRA0A1B0GVN0 87 aa9.58□□□□□ -0.88
COL6A1-202ENST00000463060 F8VRH5 84 aa9.58□□□□□ -0.88
COL6A1-202ENST00000463060 IGLC3P0DOY3 106 aa9.58□□□□□ -0.88
COL6A1-202ENST00000463060 IGLV5-45A0A087WSX0 123 aa9.57□□□□□ -0.88
COL6A1-202ENST00000463060 IGHV3OR16-9A0A0B4J2B5 98 aa9.57□□□□□ -0.88
COL6A1-202ENST00000463060 LOC105371267A0A1B0GV96 52 aa9.57□□□□□ -0.88
COL6A1-202ENST00000463060 H0Y8G0 127 aa9.57□□□□□ -0.88
COL6A1-202ENST00000463060 CRPP02741 224 aa9.57□□□□□ -0.88
COL6A1-202ENST00000463060 SS18Q15532 418 aa9.57□□□□□ -0.88
COL6A1-202ENST00000463060 CHCHD10Q8WYQ3 142 aaPredicted RBP9.57□□□□□ -0.88
COL6A1-202ENST00000463060 IGLV10-54A0A075B6I4 117 aa9.56□□□□□ -0.88
COL6A1-202ENST00000463060 C11orf86A6NJI1 115 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms