RNA–Protein interactions for RNA: ENST00000461115.5

IFT88-204, Transcript of intraflagellar transport 88, humanhuman

TSL 2

Gene IFT88, Length 1,440 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-204ENST00000461115 Q8NAQ8 132 aa7.66□□□□□ -1.18
IFT88-204ENST00000461115 OR11H2Q8NH07 326 aa7.66□□□□□ -1.18
IFT88-204ENST00000461115 ZMAT5Q9UDW3 170 aaKnown RBP7.66□□□□□ -1.18
IFT88-204ENST00000461115 IGLV5-45A0A087WSX0 123 aa7.65□□□□□ -1.18
IFT88-204ENST00000461115 TINCRA0A1B0GVN0 87 aa7.65□□□□□ -1.18
IFT88-204ENST00000461115 TMEM223A0PJW6 202 aa7.65□□□□□ -1.18
IFT88-204ENST00000461115 IGHV4-30-4P0DP06 118 aa7.65□□□□□ -1.18
IFT88-204ENST00000461115 ZNF22P17026 224 aaPredicted RBP7.65□□□□□ -1.18
IFT88-204ENST00000461115 HERVK_113P61574 105 aa7.65□□□□□ -1.18
IFT88-204ENST00000461115 SMAGPQ0VAQ4 97 aa7.65□□□□□ -1.18
IFT88-204ENST00000461115 PHLDA1Q8WV24 401 aaPredicted RBP7.65□□□□□ -1.18
IFT88-204ENST00000461115 PRADC1Q9BSG0 188 aa7.65□□□□□ -1.18
IFT88-204ENST00000461115 CHAC1Q9BUX1 264 aa7.65□□□□□ -1.18
IFT88-204ENST00000461115 TM2D2Q9BX73 214 aa7.65□□□□□ -1.18
IFT88-204ENST00000461115 TTTY13Q9BZ97 58 aa7.65□□□□□ -1.18
IFT88-204ENST00000461115 TRGV4A0A0C4DH28 118 aa7.64□□□□□ -1.19
IFT88-204ENST00000461115 IGHV3-38A0A0C4DH36 116 aa7.64□□□□□ -1.19
IFT88-204ENST00000461115 MYMXA0A1B0GTQ4 84 aa7.64□□□□□ -1.19
IFT88-204ENST00000461115 TIRAPP58753 221 aa7.64□□□□□ -1.19
IFT88-204ENST00000461115 BATFQ16520 125 aa7.64□□□□□ -1.19
IFT88-204ENST00000461115 C3orf56Q8N813 242 aa7.64□□□□□ -1.19
IFT88-204ENST00000461115 STAB1Q9NY15 2570 aa7.63□□□□□ -1.19
IFT88-204ENST00000461115 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.63□□□□□ -1.19
IFT88-204ENST00000461115 A0A0J9YXV3 536 aa7.63□□□□□ -1.19
IFT88-204ENST00000461115 IGKV2-29A2NJV5 120 aaPredicted RBP7.63□□□□□ -1.19
IFT88-204ENST00000461115 GAGE12JA6NER3 117 aa7.63□□□□□ -1.19
IFT88-204ENST00000461115 KRTAP10-11P60412 298 aa7.63□□□□□ -1.19
IFT88-204ENST00000461115 GAGE1Q13065 139 aa7.63□□□□□ -1.19
IFT88-204ENST00000461115 GAGE4Q13068 117 aa7.63□□□□□ -1.19
IFT88-204ENST00000461115 GAGE5Q13069 117 aa7.63□□□□□ -1.19
IFT88-204ENST00000461115 DEFB135Q30KP9 77 aa7.63□□□□□ -1.19
IFT88-204ENST00000461115 GAGE13Q4V321 117 aa7.63□□□□□ -1.19
IFT88-204ENST00000461115 ORAOV1Q8WV07 137 aa7.63□□□□□ -1.19
IFT88-204ENST00000461115 TRAV8-6A0A0B4J262 113 aa7.62□□□□□ -1.19
IFT88-204ENST00000461115 IGHV4-28A0A0C4DH34 117 aa7.62□□□□□ -1.19
IFT88-204ENST00000461115 LEPROTO15243 131 aa7.62□□□□□ -1.19
IFT88-204ENST00000461115 ZNF25P17030 456 aaPredicted RBP7.62□□□□□ -1.19
IFT88-204ENST00000461115 UBE2D1P51668 147 aa7.62□□□□□ -1.19
IFT88-204ENST00000461115 TCTAP57738 103 aa7.62□□□□□ -1.19
IFT88-204ENST00000461115 FAM222AQ5U5X8 452 aa7.62□□□□□ -1.19
IFT88-204ENST00000461115 CEMP1Q6PRD7 247 aaPredicted RBP7.62□□□□□ -1.19
IFT88-204ENST00000461115 Q6ZUT4 128 aa7.62□□□□□ -1.19
IFT88-204ENST00000461115 PRO0255Q9UI72 69 aa7.62□□□□□ -1.19
IFT88-204ENST00000461115 LOC100131303A0A0U1RQF7 123 aa7.61□□□□□ -1.19
IFT88-204ENST00000461115 TAX1BP3O14907 124 aa7.61□□□□□ -1.19
IFT88-204ENST00000461115 EMP1P54849 157 aa7.61□□□□□ -1.19
IFT88-204ENST00000461115 TMEM170BQ5T4T1 132 aa7.61□□□□□ -1.19
IFT88-204ENST00000461115 CDC42SE2Q9NRR3 84 aa7.61□□□□□ -1.19
IFT88-204ENST00000461115 COX11Q9Y6N1 276 aa7.61□□□□□ -1.19
IFT88-204ENST00000461115 TRBV6-8A0A0A6YYG3 113 aa7.61□□□□□ -1.19
IFT88-204ENST00000461115 DEFB130BP0DP73 79 aa7.61□□□□□ -1.19
IFT88-204ENST00000461115 DEFB130AP0DP74 79 aa7.61□□□□□ -1.19
IFT88-204ENST00000461115 PLEKHB2Q96CS7 222 aa7.61□□□□□ -1.19
IFT88-204ENST00000461115 TMEM243Q9BU79 118 aa7.61□□□□□ -1.19
IFT88-204ENST00000461115 FBN1P35555 2871 aaKnown RBP7.6□□□□□ -1.19
IFT88-204ENST00000461115 TEX48A0A1B0GUV7 120 aa7.6□□□□□ -1.19
IFT88-204ENST00000461115 A6NDN8 102 aa7.6□□□□□ -1.19
IFT88-204ENST00000461115 J3QQQ9 107 aa7.6□□□□□ -1.19
IFT88-204ENST00000461115 TSPEAR-AS2P59090 65 aa7.6□□□□□ -1.19
IFT88-204ENST00000461115 CEND1Q8N111 149 aa7.6□□□□□ -1.19
IFT88-204ENST00000461115 OR5A1Q8NGJ0 315 aa7.6□□□□□ -1.19
IFT88-204ENST00000461115 SPANXB1Q9NS25 103 aaPredicted RBP7.6□□□□□ -1.19
IFT88-204ENST00000461115 TRAV26-1A0A087WT03 109 aa7.59□□□□□ -1.19
IFT88-204ENST00000461115 IGHV1-58A0A0C4DH39 117 aa7.59□□□□□ -1.19
IFT88-204ENST00000461115 A0A0J9YY99 117 aa7.59□□□□□ -1.19
IFT88-204ENST00000461115 ZNF815PA8K554 130 aa7.59□□□□□ -1.19
IFT88-204ENST00000461115 H3BRM9 83 aa7.59□□□□□ -1.19
IFT88-204ENST00000461115 DGAT2L7PQ6IED9 249 aa7.59□□□□□ -1.19
IFT88-204ENST00000461115 A0A1B0GWB2 263 aa7.58□□□□□ -1.2
IFT88-204ENST00000461115 SPART-AS1P0CW21 52 aa7.58□□□□□ -1.2
IFT88-204ENST00000461115 HERVK_113P63121 156 aa7.58□□□□□ -1.2
IFT88-204ENST00000461115 LINC00242Q5T6M2 205 aa7.58□□□□□ -1.2
IFT88-204ENST00000461115 KRTAP19-1Q8IUB9 90 aa7.58□□□□□ -1.2
IFT88-204ENST00000461115 VSIG2Q96IQ7 327 aa7.58□□□□□ -1.2
IFT88-204ENST00000461115 NBEAL2Q6ZNJ1 2754 aa7.57□□□□□ -1.2
IFT88-204ENST00000461115 MAST4O15021 2626 aa7.57□□□□□ -1.2
IFT88-204ENST00000461115 IGLV5-39A0A0G2JS06 123 aa7.57□□□□□ -1.2
IFT88-204ENST00000461115 A0A1B0GUV1 79 aa7.57□□□□□ -1.2
IFT88-204ENST00000461115 ATP5G1P05496 136 aa7.57□□□□□ -1.2
IFT88-204ENST00000461115 IGHV3-30-3P0DP02 117 aa7.57□□□□□ -1.2
IFT88-204ENST00000461115 FXYD2P54710 66 aa7.57□□□□□ -1.2
IFT88-204ENST00000461115 ATP6V0E2Q8NHE4 81 aa7.57□□□□□ -1.2
IFT88-204ENST00000461115 COL6A5A8TX70 2615 aa7.57□□□□□ -1.2
IFT88-204ENST00000461115 GYPEP15421 78 aa7.56□□□□□ -1.2
IFT88-204ENST00000461115 DAD1P61803 113 aa7.56□□□□□ -1.2
IFT88-204ENST00000461115 RNASE13Q5GAN3 156 aaKnown RBP7.56□□□□□ -1.2
IFT88-204ENST00000461115 TMEM101Q96IK0 257 aa7.56□□□□□ -1.2
IFT88-204ENST00000461115 C11orf68Q9H3H3 251 aaKnown RBP7.56□□□□□ -1.2
IFT88-204ENST00000461115 CELA1Q9UNI1 258 aa7.56□□□□□ -1.2
IFT88-204ENST00000461115 LGALS3P17931 250 aaKnown RBP7.55□□□□□ -1.2
IFT88-204ENST00000461115 GEMIN7Q9H840 131 aaKnown RBP7.55□□□□□ -1.2
IFT88-204ENST00000461115 CDKN2A-AS1Q9UH64 79 aa7.55□□□□□ -1.2
IFT88-204ENST00000461115 ANK2Q01484 3957 aa7.55□□□□□ -1.2
IFT88-204ENST00000461115 C9orf118A6NHY6 69 aa7.54□□□□□ -1.2
IFT88-204ENST00000461115 H3BNG1 76 aa7.54□□□□□ -1.2
IFT88-204ENST00000461115 UBE2L6O14933 153 aa7.54□□□□□ -1.2
IFT88-204ENST00000461115 GCSHP23434 173 aa7.54□□□□□ -1.2
IFT88-204ENST00000461115 AMMECR1LQ6DCA0 310 aa7.54□□□□□ -1.2
IFT88-204ENST00000461115 ZFAND6Q6FIF0 208 aa7.54□□□□□ -1.2
IFT88-204ENST00000461115 SH2D6Q7Z4S9 175 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms