RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 PYGO1Q9Y3Y4 419 aa14.16□□□□□ -0.14
CNEP1R1-203ENST00000458059 TRAV4A0A0B4J268 109 aa14.16□□□□□ -0.14
CNEP1R1-203ENST00000458059 TRGV1A0A0A0MS02 117 aa14.16□□□□□ -0.14
CNEP1R1-203ENST00000458059 LINC00694P0DN24 101 aa14.16□□□□□ -0.14
CNEP1R1-203ENST00000458059 USP24Q9UPU5 2620 aa14.16□□□□□ -0.14
CNEP1R1-203ENST00000458059 TMEM89A2RUT3 159 aa14.15□□□□□ -0.14
CNEP1R1-203ENST00000458059 ANAPC13Q9BS18 74 aa14.15□□□□□ -0.14
CNEP1R1-203ENST00000458059 MIAQ16674 131 aa14.14□□□□□ -0.15
CNEP1R1-203ENST00000458059 Q6YL49 198 aa14.14□□□□□ -0.15
CNEP1R1-203ENST00000458059 TEX29Q8N6K0 151 aa14.14□□□□□ -0.15
CNEP1R1-203ENST00000458059 Q9H8V8 135 aa14.13□□□□□ -0.15
CNEP1R1-203ENST00000458059 TINCRA0A1B0GVN0 87 aa14.13□□□□□ -0.15
CNEP1R1-203ENST00000458059 ZFAND6Q6FIF0 208 aa14.13□□□□□ -0.15
CNEP1R1-203ENST00000458059 NBEAL2Q6ZNJ1 2754 aa14.13□□□□□ -0.15
CNEP1R1-203ENST00000458059 IGKV3OR2-268A0A0C4DH90 116 aa14.13□□□□□ -0.15
CNEP1R1-203ENST00000458059 C11orf72Q8NBR9 251 aa14.13□□□□□ -0.15
CNEP1R1-203ENST00000458059 TMEM101Q96IK0 257 aa14.13□□□□□ -0.15
CNEP1R1-203ENST00000458059 H7C423 109 aa14.12□□□□□ -0.15
CNEP1R1-203ENST00000458059 APCP25054 2843 aa14.12□□□□□ -0.15
CNEP1R1-203ENST00000458059 TTC32Q5I0X7 151 aa14.12□□□□□ -0.15
CNEP1R1-203ENST00000458059 TRBV30A0A0K0K1B3 111 aa14.11□□□□□ -0.15
CNEP1R1-203ENST00000458059 SNCGO76070 127 aa14.11□□□□□ -0.15
CNEP1R1-203ENST00000458059 UBE2WQ96B02 151 aa14.11□□□□□ -0.15
CNEP1R1-203ENST00000458059 SPANXA1Q9NS26 97 aa14.11□□□□□ -0.15
CNEP1R1-203ENST00000458059 A0A096LNT2 108 aa14.11□□□□□ -0.15
CNEP1R1-203ENST00000458059 TRAV8-4A0A0B4J246 113 aa14.11□□□□□ -0.15
CNEP1R1-203ENST00000458059 TRBV10-2A0A0K0K1G8 114 aa14.11□□□□□ -0.15
CNEP1R1-203ENST00000458059 TMEM262E9PQX1 116 aa14.1□□□□□ -0.15
CNEP1R1-203ENST00000458059 CR1P17927 2039 aa14.1□□□□□ -0.15
CNEP1R1-203ENST00000458059 INSP01308 110 aa14.1□□□□□ -0.15
CNEP1R1-203ENST00000458059 COX6CP09669 75 aa14.1□□□□□ -0.15
CNEP1R1-203ENST00000458059 IGHV4-31P0DP07 118 aa14.1□□□□□ -0.15
CNEP1R1-203ENST00000458059 GAGE12JA6NER3 117 aa14.09□□□□□ -0.15
CNEP1R1-203ENST00000458059 GAGE4Q13068 117 aa14.09□□□□□ -0.15
CNEP1R1-203ENST00000458059 GAGE5Q13069 117 aa14.09□□□□□ -0.15
CNEP1R1-203ENST00000458059 Q6ZTI0 123 aa14.09□□□□□ -0.15
CNEP1R1-203ENST00000458059 GCN1Q92616 2671 aaKnown RBP14.09□□□□□ -0.15
CNEP1R1-203ENST00000458059 NBPF19A0A087WUL8 3843 aa14.08□□□□□ -0.16
CNEP1R1-203ENST00000458059 GAGE2BQ13066 116 aa14.08□□□□□ -0.16
CNEP1R1-203ENST00000458059 GAGE2EQ4V326 116 aa14.08□□□□□ -0.16
CNEP1R1-203ENST00000458059 PEMTQ9UBM1 199 aa14.08□□□□□ -0.16
CNEP1R1-203ENST00000458059 GAGE2DQ9UEU5 116 aa14.08□□□□□ -0.16
CNEP1R1-203ENST00000458059 DSCR9P59020 149 aa14.07□□□□□ -0.16
CNEP1R1-203ENST00000458059 DEFB114Q30KQ6 69 aa14.07□□□□□ -0.16
CNEP1R1-203ENST00000458059 MEIG1Q5JSS6 88 aa14.07□□□□□ -0.16
CNEP1R1-203ENST00000458059 C15orf53Q8NAA6 179 aa14.07□□□□□ -0.16
CNEP1R1-203ENST00000458059 SPANXDQ9BXN6 97 aa14.07□□□□□ -0.16
CNEP1R1-203ENST00000458059 SPANXCQ9NY87 97 aa14.07□□□□□ -0.16
CNEP1R1-203ENST00000458059 PLA2G2AP14555 144 aa14.06□□□□□ -0.16
CNEP1R1-203ENST00000458059 LINC00242Q5T6M2 205 aa14.06□□□□□ -0.16
CNEP1R1-203ENST00000458059 STHQ8IWL8 128 aa14.06□□□□□ -0.16
CNEP1R1-203ENST00000458059 WFDC10AQ9H1F0 79 aa14.06□□□□□ -0.16
CNEP1R1-203ENST00000458059 ODF3L2Q3SX64 289 aa14.06□□□□□ -0.16
CNEP1R1-203ENST00000458059 Q8N2B8 174 aa14.05□□□□□ -0.16
CNEP1R1-203ENST00000458059 CITED2Q99967 270 aaPredicted RBP14.05□□□□□ -0.16
CNEP1R1-203ENST00000458059 PRIMA1Q86XR5 153 aa14.04□□□□□ -0.16
CNEP1R1-203ENST00000458059 SS18L2Q9UHA2 77 aa14.04□□□□□ -0.16
CNEP1R1-203ENST00000458059 J3QLI3 93 aa14.04□□□□□ -0.16
CNEP1R1-203ENST00000458059 C1orf158Q8N1D5 194 aa14.04□□□□□ -0.16
CNEP1R1-203ENST00000458059 CITED1Q99966 193 aa14.04□□□□□ -0.16
CNEP1R1-203ENST00000458059 B5MCH6 92 aa14.03□□□□□ -0.16
CNEP1R1-203ENST00000458059 PIK3CD-AS1Q5SR53 167 aa14.03□□□□□ -0.16
CNEP1R1-203ENST00000458059 SOSTDC1Q6X4U4 206 aa14.03□□□□□ -0.16
CNEP1R1-203ENST00000458059 LOC100131303A0A0U1RQF7 123 aa14.03□□□□□ -0.16
CNEP1R1-203ENST00000458059 NTM-AS1Q6ZSK4 140 aa14.03□□□□□ -0.16
CNEP1R1-203ENST00000458059 LINC00308Q8TCZ7 52 aa14.03□□□□□ -0.16
CNEP1R1-203ENST00000458059 Q96MF0 132 aa14.03□□□□□ -0.16
CNEP1R1-203ENST00000458059 NOP10Q9NPE3 64 aaKnown RBP14.03□□□□□ -0.16
CNEP1R1-203ENST00000458059 RS1O15537 224 aa14.02□□□□□ -0.16
CNEP1R1-203ENST00000458059 CIRBPQ14011 172 aaKnown RBP14.02□□□□□ -0.16
CNEP1R1-203ENST00000458059 TOMM7Q9P0U1 55 aa14.02□□□□□ -0.17
CNEP1R1-203ENST00000458059 EDA2RQ9HAV5 297 aa14.01□□□□□ -0.17
CNEP1R1-203ENST00000458059 YAE1D1Q9NRH1 226 aa14.01□□□□□ -0.17
CNEP1R1-203ENST00000458059 NDUFA1O15239 70 aa14.01□□□□□ -0.17
CNEP1R1-203ENST00000458059 RNF152Q8N8N0 203 aa14.01□□□□□ -0.17
CNEP1R1-203ENST00000458059 LST1O00453 97 aa14.01□□□□□ -0.17
CNEP1R1-203ENST00000458059 C4orf3Q8WVX3 66 aa14□□□□□ -0.17
CNEP1R1-203ENST00000458059 RPL35AP18077 110 aaKnown RBP14□□□□□ -0.17
CNEP1R1-203ENST00000458059 NHLRC4P0CG21 123 aaPredicted RBP13.99□□□□□ -0.17
CNEP1R1-203ENST00000458059 SMIM1B2RUZ4 78 aa13.99□□□□□ -0.17
CNEP1R1-203ENST00000458059 GAGE7O76087 117 aa13.98□□□□□ -0.17
CNEP1R1-203ENST00000458059 GAGE12FP0CL80 117 aa13.98□□□□□ -0.17
CNEP1R1-203ENST00000458059 GAGE12GP0CL81 117 aa13.98□□□□□ -0.17
CNEP1R1-203ENST00000458059 GAGE12IP0CL82 117 aa13.98□□□□□ -0.17
CNEP1R1-203ENST00000458059 RPL36AP83881 106 aaKnown RBP13.98□□□□□ -0.17
CNEP1R1-203ENST00000458059 BEAN1Q3B7T3 259 aa13.98□□□□□ -0.17
CNEP1R1-203ENST00000458059 RPL36ALQ969Q0 106 aaKnown RBP13.98□□□□□ -0.17
CNEP1R1-203ENST00000458059 HIVEP2P31629 2446 aa13.98□□□□□ -0.17
CNEP1R1-203ENST00000458059 FSHBP01225 129 aa13.98□□□□□ -0.17
CNEP1R1-203ENST00000458059 NDUFV3P56181 108 aaKnown RBP13.98□□□□□ -0.17
CNEP1R1-203ENST00000458059 DNAJC30Q96LL9 226 aa13.98□□□□□ -0.17
CNEP1R1-203ENST00000458059 A8MTW9 85 aa13.97□□□□□ -0.17
CNEP1R1-203ENST00000458059 HERVK_113P63121 156 aa13.97□□□□□ -0.17
CNEP1R1-203ENST00000458059 CCDC179H3BU77 68 aa13.97□□□□□ -0.17
CNEP1R1-203ENST00000458059 TIRAPP58753 221 aa13.96□□□□□ -0.17
CNEP1R1-203ENST00000458059 UBR5O95071 2799 aaPredicted RBP13.96□□□□□ -0.17
CNEP1R1-203ENST00000458059 K7EQD1 137 aa13.96□□□□□ -0.17
CNEP1R1-203ENST00000458059 TRGV2A0A075B6R0 118 aa13.95□□□□□ -0.18
CNEP1R1-203ENST00000458059 C3orf56Q8N813 242 aa13.95□□□□□ -0.18
CNEP1R1-203ENST00000458059 UBE2L6O14933 153 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms