RNA–Protein interactions for RNA: ENST00000457924.2

UPF3AP2-201, Transcript of UPF3A pseudogene 2, humanhuman

BASIC

Gene UPF3AP2, Length 1,132 nt, Biotype transcribed processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3AP2-201ENST00000457924 LINC00526Q96FQ7 95 aa8.83□□□□□ -1
UPF3AP2-201ENST00000457924 TRAV26-2A0A0B4J265 109 aa8.82□□□□□ -1
UPF3AP2-201ENST00000457924 SYCNQ0VAF6 134 aa8.82□□□□□ -1
UPF3AP2-201ENST00000457924 TWIST1Q15672 202 aa8.82□□□□□ -1
UPF3AP2-201ENST00000457924 GATD1Q8NB37 220 aa8.82□□□□□ -1
UPF3AP2-201ENST00000457924 SMIM12Q96EX1 92 aa8.82□□□□□ -1
UPF3AP2-201ENST00000457924 CCL25O15444 150 aa8.81□□□□□ -1
UPF3AP2-201ENST00000457924 ZNF25P17030 456 aaPredicted RBP8.81□□□□□ -1
UPF3AP2-201ENST00000457924 GNG4P50150 75 aa8.81□□□□□ -1
UPF3AP2-201ENST00000457924 PTTG1IPP53801 180 aa8.81□□□□□ -1
UPF3AP2-201ENST00000457924 ZNF664Q8N3J9 261 aa8.81□□□□□ -1
UPF3AP2-201ENST00000457924 C9orf62Q8N4C0 152 aa8.81□□□□□ -1
UPF3AP2-201ENST00000457924 TMEM101Q96IK0 257 aa8.81□□□□□ -1
UPF3AP2-201ENST00000457924 BTF3L4Q96K17 158 aa8.81□□□□□ -1
UPF3AP2-201ENST00000457924 MANBALQ9NQG1 85 aa8.81□□□□□ -1
UPF3AP2-201ENST00000457924 LPAP08519 4548 aa8.81□□□□□ -1
UPF3AP2-201ENST00000457924 LINC00959A0A1B0GUT2 108 aa8.8□□□□□ -1
UPF3AP2-201ENST00000457924 RAB19A4D1S5 217 aa8.8□□□□□ -1
UPF3AP2-201ENST00000457924 GAGE2BQ13066 116 aa8.8□□□□□ -1
UPF3AP2-201ENST00000457924 RPL39LQ96EH5 51 aaKnown RBP8.8□□□□□ -1
UPF3AP2-201ENST00000457924 BIN3Q9NQY0 253 aa8.8□□□□□ -1
UPF3AP2-201ENST00000457924 GNG13Q9P2W3 67 aa8.8□□□□□ -1
UPF3AP2-201ENST00000457924 LOC107984640A0A0U1RRK4 108 aa8.79□□□□□ -1
UPF3AP2-201ENST00000457924 MT-ND6P03923 174 aa8.79□□□□□ -1
UPF3AP2-201ENST00000457924 CTRLP40313 264 aa8.79□□□□□ -1
UPF3AP2-201ENST00000457924 CCL20P78556 96 aa8.79□□□□□ -1
UPF3AP2-201ENST00000457924 SS18Q15532 418 aa8.79□□□□□ -1
UPF3AP2-201ENST00000457924 ISOC2Q96AB3 205 aa8.79□□□□□ -1
UPF3AP2-201ENST00000457924 SDHAF1A6NFY7 115 aa8.78□□□□□ -1
UPF3AP2-201ENST00000457924 CAMPP49913 170 aa8.78□□□□□ -1
UPF3AP2-201ENST00000457924 ZNF345Q14585 488 aa8.78□□□□□ -1
UPF3AP2-201ENST00000457924 CNFNQ9BYD5 112 aa8.78□□□□□ -1
UPF3AP2-201ENST00000457924 PSORS1C2Q9UIG4 136 aa8.78□□□□□ -1
UPF3AP2-201ENST00000457924 B5MCH6 92 aa8.77□□□□□ -1.01
UPF3AP2-201ENST00000457924 I3L3M4 83 aa8.77□□□□□ -1.01
UPF3AP2-201ENST00000457924 PMCHP20382 165 aa8.77□□□□□ -1.01
UPF3AP2-201ENST00000457924 TEX261Q6UWH6 196 aa8.77□□□□□ -1.01
UPF3AP2-201ENST00000457924 CD164L2Q6UWJ8 174 aa8.77□□□□□ -1.01
UPF3AP2-201ENST00000457924 SMIM15Q7Z3B0 74 aa8.77□□□□□ -1.01
UPF3AP2-201ENST00000457924 A0A1W2PNN7 141 aa8.76□□□□□ -1.01
UPF3AP2-201ENST00000457924 KANTRA0A1W2PQU2 76 aa8.76□□□□□ -1.01
UPF3AP2-201ENST00000457924 SMLR1H3BR10 107 aa8.76□□□□□ -1.01
UPF3AP2-201ENST00000457924 EIF5AP63241 154 aaKnown RBP8.76□□□□□ -1.01
UPF3AP2-201ENST00000457924 C1orf137Q5JT78 98 aa8.76□□□□□ -1.01
UPF3AP2-201ENST00000457924 EIF5AL1Q6IS14 154 aaKnown RBP8.76□□□□□ -1.01
UPF3AP2-201ENST00000457924 IGLV4-69A0A075B6H9 119 aa8.75□□□□□ -1.01
UPF3AP2-201ENST00000457924 BCL2P10415 239 aa8.75□□□□□ -1.01
UPF3AP2-201ENST00000457924 MALP21145 153 aa8.75□□□□□ -1.01
UPF3AP2-201ENST00000457924 MED9Q9NWA0 146 aa8.75□□□□□ -1.01
UPF3AP2-201ENST00000457924 TRAV1-1A0A0B4J248 108 aa8.74□□□□□ -1.01
UPF3AP2-201ENST00000457924 BCL2L11O43521 198 aa8.74□□□□□ -1.01
UPF3AP2-201ENST00000457924 PDE6DO43924 150 aa8.74□□□□□ -1.01
UPF3AP2-201ENST00000457924 C9orf116Q5BN46 136 aaPredicted RBP8.74□□□□□ -1.01
UPF3AP2-201ENST00000457924 PRR26Q8N8Z3 221 aa8.74□□□□□ -1.01
UPF3AP2-201ENST00000457924 NUP35Q8NFH5 326 aa8.74□□□□□ -1.01
UPF3AP2-201ENST00000457924 MRAP2Q96G30 205 aa8.74□□□□□ -1.01
UPF3AP2-201ENST00000457924 RPP21Q9H633 154 aaKnown RBP8.74□□□□□ -1.01
UPF3AP2-201ENST00000457924 TRBV20OR9-2A0A075B6H5 130 aa8.73□□□□□ -1.01
UPF3AP2-201ENST00000457924 TEX46H3BTG2 121 aa8.73□□□□□ -1.01
UPF3AP2-201ENST00000457924 APOMO95445 188 aa8.73□□□□□ -1.01
UPF3AP2-201ENST00000457924 ESDP10768 282 aa8.73□□□□□ -1.01
UPF3AP2-201ENST00000457924 FOXA3P55318 350 aaPredicted RBP8.73□□□□□ -1.01
UPF3AP2-201ENST00000457924 MEF2BQ02080 365 aaPredicted RBP8.73□□□□□ -1.01
UPF3AP2-201ENST00000457924 DIRC1Q969H9 104 aa8.73□□□□□ -1.01
UPF3AP2-201ENST00000457924 CAMK2N2Q96S95 79 aa8.73□□□□□ -1.01
UPF3AP2-201ENST00000457924 CDC42SE2Q9NRR3 84 aa8.73□□□□□ -1.01
UPF3AP2-201ENST00000457924 RPL18AQ02543 176 aaKnown RBP8.72□□□□□ -1.01
UPF3AP2-201ENST00000457924 PHF5AQ7RTV0 110 aaKnown RBP8.72□□□□□ -1.01
UPF3AP2-201ENST00000457924 MRPL52Q86TS9 123 aaKnown RBP8.72□□□□□ -1.01
UPF3AP2-201ENST00000457924 FAM210AQ96ND0 272 aa8.72□□□□□ -1.01
UPF3AP2-201ENST00000457924 TRBV6-5A0A0K0K1A5 114 aa8.71□□□□□ -1.02
UPF3AP2-201ENST00000457924 A0A0U1RQV1 116 aa8.71□□□□□ -1.02
UPF3AP2-201ENST00000457924 HMSDA8MTL9 139 aa8.71□□□□□ -1.02
UPF3AP2-201ENST00000457924 COX7A2LO14548 114 aa8.71□□□□□ -1.02
UPF3AP2-201ENST00000457924 TSHBP01222 138 aa8.71□□□□□ -1.02
UPF3AP2-201ENST00000457924 IGLV7-43P04211 117 aa8.71□□□□□ -1.02
UPF3AP2-201ENST00000457924 RNASE7Q9H1E1 156 aaKnown RBP8.71□□□□□ -1.02
UPF3AP2-201ENST00000457924 ST20Q9HBF5 79 aa8.71□□□□□ -1.02
UPF3AP2-201ENST00000457924 TMEM242Q9NWH2 141 aa8.71□□□□□ -1.02
UPF3AP2-201ENST00000457924 C1orf196B1AJZ1 125 aa8.7□□□□□ -1.02
UPF3AP2-201ENST00000457924 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.7□□□□□ -1.02
UPF3AP2-201ENST00000457924 C2orf48Q96LS8 159 aa8.7□□□□□ -1.02
UPF3AP2-201ENST00000457924 IGLV1-50A0A075B6I6 118 aa8.68□□□□□ -1.02
UPF3AP2-201ENST00000457924 C7orf77A4D0Y5 90 aa8.68□□□□□ -1.02
UPF3AP2-201ENST00000457924 H0Y9J4 135 aa8.68□□□□□ -1.02
UPF3AP2-201ENST00000457924 PRR4Q16378 134 aa8.68□□□□□ -1.02
UPF3AP2-201ENST00000457924 TSKUQ8WUA8 353 aa8.68□□□□□ -1.02
UPF3AP2-201ENST00000457924 OPRPNQ99935 248 aaPredicted RBP8.68□□□□□ -1.02
UPF3AP2-201ENST00000457924 A0A087WZ39 114 aa8.67□□□□□ -1.02
UPF3AP2-201ENST00000457924 K7EN84 100 aa8.67□□□□□ -1.02
UPF3AP2-201ENST00000457924 OCC1Q8TAD7 63 aa8.67□□□□□ -1.02
UPF3AP2-201ENST00000457924 KRTAP4-11Q9BYQ6 195 aa8.67□□□□□ -1.02
UPF3AP2-201ENST00000457924 MUC2Q02817 5179 aa8.66□□□□□ -1.02
UPF3AP2-201ENST00000457924 TRBV27A0A0K0K1C4 114 aa8.66□□□□□ -1.02
UPF3AP2-201ENST00000457924 SMAGPQ0VAQ4 97 aa8.66□□□□□ -1.02
UPF3AP2-201ENST00000457924 TRAV13-1A0A0B4J241 112 aa8.65□□□□□ -1.02
UPF3AP2-201ENST00000457924 UBE2D1P51668 147 aa8.65□□□□□ -1.02
UPF3AP2-201ENST00000457924 POLR2KP53803 58 aaKnown RBP8.65□□□□□ -1.02
UPF3AP2-201ENST00000457924 SPAG11BQ08648 103 aa8.65□□□□□ -1.02
UPF3AP2-201ENST00000457924 RGS21Q2M5E4 152 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms