RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 ORMDL3Q8N138 153 aa15.16■□□□□ 0.02
CBX3-204ENST00000456948 AP5S1Q9NUS5 200 aa15.16■□□□□ 0.02
CBX3-204ENST00000456948 IMMP2LQ96T52 175 aa15.15■□□□□ 0.02
CBX3-204ENST00000456948 CTDSP1Q9GZU7 261 aa15.15■□□□□ 0.02
CBX3-204ENST00000456948 EPM2AB3EWF7 344 aa15.14■□□□□ 0.01
CBX3-204ENST00000456948 TMEM136Q6ZRR5 245 aa15.14■□□□□ 0.01
CBX3-204ENST00000456948 GAGE12HA6NDE8 117 aa15.13■□□□□ 0.01
CBX3-204ENST00000456948 PRSS1P07477 247 aa15.13■□□□□ 0.01
CBX3-204ENST00000456948 SS18Q15532 418 aa15.13■□□□□ 0.01
CBX3-204ENST00000456948 COMMD7Q86VX2 200 aa15.13■□□□□ 0.01
CBX3-204ENST00000456948 ZNF664Q8N3J9 261 aa15.13■□□□□ 0.01
CBX3-204ENST00000456948 CHCHD10Q8WYQ3 142 aaPredicted RBP15.13■□□□□ 0.01
CBX3-204ENST00000456948 SEC11CQ9BY50 192 aa15.13■□□□□ 0.01
CBX3-204ENST00000456948 hDV102S1A0JD36 115 aa15.12■□□□□ 0.01
CBX3-204ENST00000456948 SMIM2Q9BVW6 85 aa15.12■□□□□ 0.01
CBX3-204ENST00000456948 CDC42SE2Q9NRR3 84 aa15.12■□□□□ 0.01
CBX3-204ENST00000456948 CSDC2Q9Y534 153 aaKnown RBP15.12■□□□□ 0.01
CBX3-204ENST00000456948 FAM229AH3BQW9 127 aa15.11■□□□□ 0.01
CBX3-204ENST00000456948 RAB5AP20339 215 aa15.11■□□□□ 0.01
CBX3-204ENST00000456948 PRELID3AQ96N28 172 aa15.11■□□□□ 0.01
CBX3-204ENST00000456948 LAMTOR2Q9Y2Q5 125 aa15.11■□□□□ 0.01
CBX3-204ENST00000456948 TRAV16A0A0A6YYK6 109 aaPredicted RBP15.1■□□□□ 0.01
CBX3-204ENST00000456948 CCL25O15444 150 aa15.09■□□□□ 0.01
CBX3-204ENST00000456948 NPYP01303 97 aa15.09■□□□□ 0.01
CBX3-204ENST00000456948 LINC01620Q4KN68 170 aa15.09■□□□□ 0.01
CBX3-204ENST00000456948 LINC00959A0A1B0GUT2 108 aa15.08■□□□□ 0
CBX3-204ENST00000456948 S100PP25815 95 aa15.08■□□□□ 0
CBX3-204ENST00000456948 Q6ZSA8 131 aa15.08■□□□□ 0
CBX3-204ENST00000456948 TIMM21Q9BVV7 248 aa15.08■□□□□ 0
CBX3-204ENST00000456948 FAM30AQ9NZY2 134 aa15.08■□□□□ 0
CBX3-204ENST00000456948 TRAV9-1A0A075B6T8 112 aa15.07■□□□□ 0
CBX3-204ENST00000456948 ADCYAP1P18509 176 aa15.07■□□□□ 0
CBX3-204ENST00000456948 C9orf163Q8N9P6 203 aa15.07■□□□□ 0
CBX3-204ENST00000456948 UBE2D4Q9Y2X8 147 aa15.07■□□□□ 0
CBX3-204ENST00000456948 XCL1P47992 114 aa15.06■□□□□ 0
CBX3-204ENST00000456948 MAP1LC3AQ9H492 121 aa15.06■□□□□ 0
CBX3-204ENST00000456948 C1orf196B1AJZ1 125 aa15.05■□□□□ -0
CBX3-204ENST00000456948 SMR3BP02814 79 aaPredicted RBP15.05■□□□□ -0
CBX3-204ENST00000456948 CNBPP62633 177 aaKnown RBP15.05■□□□□ -0
CBX3-204ENST00000456948 HAMPP81172 84 aa15.03■□□□□ -0
CBX3-204ENST00000456948 Q5VSD8 79 aa15.03■□□□□ -0
CBX3-204ENST00000456948 CD164L2Q6UWJ8 174 aa15.03■□□□□ -0
CBX3-204ENST00000456948 CHAC1Q9BUX1 264 aa15.03■□□□□ -0
CBX3-204ENST00000456948 SPANXA1Q9NS26 97 aa15.03■□□□□ -0
CBX3-204ENST00000456948 FOXI1Q12951 378 aa15.02■□□□□ -0
CBX3-204ENST00000456948 PRSS47A8MTI9 375 aa15.01□□□□□ -0.01
CBX3-204ENST00000456948 IGHV3-64A0A075B6Q5 118 aa15□□□□□ -0.01
CBX3-204ENST00000456948 IGHV1-58A0A0C4DH39 117 aa15□□□□□ -0.01
CBX3-204ENST00000456948 LOC389332A0A1B0GUA5 103 aa15□□□□□ -0.01
CBX3-204ENST00000456948 RHEBQ15382 184 aa14.99□□□□□ -0.01
CBX3-204ENST00000456948 COX19Q49B96 90 aa14.99□□□□□ -0.01
CBX3-204ENST00000456948 C15orf56Q8N910 161 aa14.99□□□□□ -0.01
CBX3-204ENST00000456948 DNAH8Q96JB1 4490 aa14.98□□□□□ -0.01
CBX3-204ENST00000456948 TRAV13-1A0A0B4J241 112 aa14.98□□□□□ -0.01
CBX3-204ENST00000456948 K7EMI3 77 aa14.98□□□□□ -0.01
CBX3-204ENST00000456948 MALP21145 153 aa14.98□□□□□ -0.01
CBX3-204ENST00000456948 G0S2P27469 103 aa14.98□□□□□ -0.01
CBX3-204ENST00000456948 IFI27P40305 119 aaPredicted RBP14.98□□□□□ -0.01
CBX3-204ENST00000456948 RPL39P62891 51 aaKnown RBP14.98□□□□□ -0.01
CBX3-204ENST00000456948 C10orf91Q5T1B1 145 aa14.98□□□□□ -0.01
CBX3-204ENST00000456948 SCXQ7RTU7 201 aa14.98□□□□□ -0.01
CBX3-204ENST00000456948 Q8N8P6 123 aa14.98□□□□□ -0.01
CBX3-204ENST00000456948 CARHSP1Q9Y2V2 147 aaKnown RBP14.98□□□□□ -0.01
CBX3-204ENST00000456948 GVQW2A0A096LPI5 108 aaPredicted RBP14.97□□□□□ -0.01
CBX3-204ENST00000456948 PLA2G1BP04054 148 aaKnown RBP14.97□□□□□ -0.01
CBX3-204ENST00000456948 MRPS36P82909 103 aaKnown RBP14.97□□□□□ -0.01
CBX3-204ENST00000456948 NDUFA5Q16718 116 aa14.97□□□□□ -0.01
CBX3-204ENST00000456948 HIGD2BQ4VC39 106 aa14.97□□□□□ -0.01
CBX3-204ENST00000456948 ZNF561-AS1K7EIQ3 104 aa14.96□□□□□ -0.01
CBX3-204ENST00000456948 COX7A2LO14548 114 aa14.96□□□□□ -0.01
CBX3-204ENST00000456948 ORMDL2Q53FV1 153 aa14.96□□□□□ -0.01
CBX3-204ENST00000456948 RNASE13Q5GAN3 156 aaKnown RBP14.96□□□□□ -0.01
CBX3-204ENST00000456948 Q6ZUT4 128 aa14.96□□□□□ -0.01
CBX3-204ENST00000456948 DPH3Q96FX2 82 aa14.96□□□□□ -0.01
CBX3-204ENST00000456948 NXT2Q9NPJ8 142 aaKnown RBP14.96□□□□□ -0.01
CBX3-204ENST00000456948 RPS10P5Q9NQ39 176 aa14.96□□□□□ -0.01
CBX3-204ENST00000456948 PKIGQ9Y2B9 76 aa14.96□□□□□ -0.01
CBX3-204ENST00000456948 SDIM1Q6ZPB5 146 aa14.95□□□□□ -0.02
CBX3-204ENST00000456948 APOMO95445 188 aa14.94□□□□□ -0.02
CBX3-204ENST00000456948 CIRBP-AS1Q8TBR5 109 aa14.94□□□□□ -0.02
CBX3-204ENST00000456948 GNB1LQ9BYB4 327 aa14.94□□□□□ -0.02
CBX3-204ENST00000456948 PYGO1Q9Y3Y4 419 aa14.94□□□□□ -0.02
CBX3-204ENST00000456948 INAFM2P0DMQ5 153 aa14.93□□□□□ -0.02
CBX3-204ENST00000456948 LINC00528Q8N1L1 170 aa14.93□□□□□ -0.02
CBX3-204ENST00000456948 CYSLTR1Q9Y271 337 aa14.93□□□□□ -0.02
CBX3-204ENST00000456948 SLPIP03973 132 aa14.92□□□□□ -0.02
CBX3-204ENST00000456948 IFITM10A6NMD0 228 aa14.91□□□□□ -0.02
CBX3-204ENST00000456948 MT-ND6P03923 174 aa14.91□□□□□ -0.02
CBX3-204ENST00000456948 Q6ZN92 141 aa14.9□□□□□ -0.02
CBX3-204ENST00000456948 FAT1Q14517 4588 aa14.9□□□□□ -0.02
CBX3-204ENST00000456948 SNAPINO95295 136 aa14.89□□□□□ -0.03
CBX3-204ENST00000456948 APOC3P02656 99 aa14.89□□□□□ -0.03
CBX3-204ENST00000456948 SVBPQ8N300 66 aa14.89□□□□□ -0.03
CBX3-204ENST00000456948 TMEM141Q96I45 108 aa14.89□□□□□ -0.03
CBX3-204ENST00000456948 KIAA1644Q3SXP7 199 aa14.88□□□□□ -0.03
CBX3-204ENST00000456948 C2orf66Q6UXQ4 117 aa14.88□□□□□ -0.03
CBX3-204ENST00000456948 PRSS3P2Q8NHM4 247 aa14.88□□□□□ -0.03
CBX3-204ENST00000456948 OPRPNQ99935 248 aaPredicted RBP14.88□□□□□ -0.03
CBX3-204ENST00000456948 C2orf88Q9BSF0 95 aa14.88□□□□□ -0.03
CBX3-204ENST00000456948 NPSP0C0P6 89 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms