RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 DYNLRB2Q8TF09 96 aa3.38□□□□□ -1.87
RIF1-207ENST00000454583 BORCS7Q96B45 105 aa3.38□□□□□ -1.87
RIF1-207ENST00000454583 GOLT1BQ9Y3E0 138 aa3.38□□□□□ -1.87
RIF1-207ENST00000454583 CCL25O15444 150 aa3.37□□□□□ -1.87
RIF1-207ENST00000454583 TRGV11A0A075B6L2 103 aa3.37□□□□□ -1.87
RIF1-207ENST00000454583 LOC389332A0A1B0GUA5 103 aa3.37□□□□□ -1.87
RIF1-207ENST00000454583 PLNP26678 52 aa3.37□□□□□ -1.87
RIF1-207ENST00000454583 TAL2Q16559 108 aa3.37□□□□□ -1.87
RIF1-207ENST00000454583 C2orf66Q6UXQ4 117 aa3.37□□□□□ -1.87
RIF1-207ENST00000454583 TRBV25-1A0A075B6N4 114 aa3.37□□□□□ -1.87
RIF1-207ENST00000454583 A0A096LPF7 62 aa3.37□□□□□ -1.87
RIF1-207ENST00000454583 LOC100131303A0A0U1RQF7 123 aa3.37□□□□□ -1.87
RIF1-207ENST00000454583 IGKCP01834 107 aa3.37□□□□□ -1.87
RIF1-207ENST00000454583 RPL39P62891 51 aaKnown RBP3.37□□□□□ -1.87
RIF1-207ENST00000454583 H7C1H1 209 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 STHQ8IWL8 128 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 PRSS3P2Q8NHM4 247 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 XCL2Q9UBD3 114 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 JMJD1CQ15652 2540 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 K7EQD1 137 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 ZNF22P17026 224 aaPredicted RBP3.36□□□□□ -1.87
RIF1-207ENST00000454583 APOC4P55056 127 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 Q6ZVH6 145 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 FA2HQ7L5A8 372 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 GTSCR1Q86UQ5 136 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 SLC25A29Q8N8R3 303 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 C1QTNF4Q9BXJ3 329 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 PRR34Q9NV39 138 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 SDHAF1A6NFY7 115 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 A8MWV9 139 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 VCYO14598 125 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 IGHV3-30P01768 117 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 IGHV3-30-5P0DP03 117 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 SLC25A34Q6PIV7 304 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 KRTAP17-1Q9BYP8 105 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 KRTAP1-5Q9BYS1 174 aa3.36□□□□□ -1.87
RIF1-207ENST00000454583 LOC107984156A0A0G2JMH3 177 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 A0A0J9YY99 117 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 H3BRM9 83 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 DPM2O94777 84 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 NHLRC4P0CG21 123 aaPredicted RBP3.35□□□□□ -1.87
RIF1-207ENST00000454583 Q6ZR54 194 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 ARL17AQ8IVW1 177 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 TTTY13Q9BZ97 58 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 TRAV8-6A0A0B4J262 113 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 TINCRA0A1B0GVN0 87 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 I3L3M4 83 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 PRB2P02812 416 aaPredicted RBP3.35□□□□□ -1.87
RIF1-207ENST00000454583 DEFB135Q30KP9 77 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 SPANXN1Q5VSR9 72 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 FAM159AQ6UWV7 190 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 PLEKHB2Q96CS7 222 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 PHLDA3Q9Y5J5 127 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 STAB2Q8WWQ8 2551 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 MGAM2Q2M2H8 2515 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 IGKV3-7A0A075B6H7 116 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 A0A087WWL8 130 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 FXYD2P54710 66 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 SEC11AP67812 179 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 ZNF415Q09FC8 603 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 COL5A1-AS1Q5SY13 56 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 ZC2HC1BQ5TFG8 222 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 NEGR1Q7Z3B1 354 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 C10orf126Q8N4M7 172 aa3.35□□□□□ -1.87
RIF1-207ENST00000454583 NOTCH1P46531 2555 aa3.34□□□□□ -1.87
RIF1-207ENST00000454583 IGHV3OR16-12A0A075B7B8 117 aa3.34□□□□□ -1.87
RIF1-207ENST00000454583 A0A0J9YWU9 116 aa3.34□□□□□ -1.87
RIF1-207ENST00000454583 TRBV10-1A0A0K0K1A3 114 aa3.34□□□□□ -1.87
RIF1-207ENST00000454583 HSD52Q0P140 79 aa3.34□□□□□ -1.87
RIF1-207ENST00000454583 PMVKQ15126 192 aa3.34□□□□□ -1.87
RIF1-207ENST00000454583 FAM222AQ5U5X8 452 aa3.34□□□□□ -1.87
RIF1-207ENST00000454583 Q6ZN92 141 aa3.34□□□□□ -1.87
RIF1-207ENST00000454583 CEND1Q8N111 149 aa3.34□□□□□ -1.87
RIF1-207ENST00000454583 ZNF625Q96I27 306 aaPredicted RBP3.34□□□□□ -1.87
RIF1-207ENST00000454583 WWC2-AS2Q96NR7 200 aa3.34□□□□□ -1.87
RIF1-207ENST00000454583 MRPL16Q9NX20 251 aaKnown RBP3.34□□□□□ -1.87
RIF1-207ENST00000454583 BIRC6Q9NR09 4857 aa3.34□□□□□ -1.87
RIF1-207ENST00000454583 H7C423 109 aa3.34□□□□□ -1.88
RIF1-207ENST00000454583 M0QXV9 152 aa3.34□□□□□ -1.88
RIF1-207ENST00000454583 RPL35AP18077 110 aaKnown RBP3.34□□□□□ -1.88
RIF1-207ENST00000454583 OR11H2Q8NH07 326 aa3.34□□□□□ -1.88
RIF1-207ENST00000454583 C9orf118A6NHY6 69 aa3.33□□□□□ -1.88
RIF1-207ENST00000454583 RHODO00212 210 aa3.33□□□□□ -1.88
RIF1-207ENST00000454583 TMEM97Q5BJF2 176 aa3.33□□□□□ -1.88
RIF1-207ENST00000454583 KHDC1LQ5JSQ8 128 aa3.33□□□□□ -1.88
RIF1-207ENST00000454583 SPATA25Q9BR10 227 aa3.33□□□□□ -1.88
RIF1-207ENST00000454583 C22orf24Q9Y442 160 aa3.33□□□□□ -1.88
RIF1-207ENST00000454583 SORL1Q92673 2214 aa3.33□□□□□ -1.88
RIF1-207ENST00000454583 MYMXA0A1B0GTQ4 84 aa3.33□□□□□ -1.88
RIF1-207ENST00000454583 COX6A2Q02221 97 aa3.33□□□□□ -1.88
RIF1-207ENST00000454583 UBE2V1Q13404 147 aa3.33□□□□□ -1.88
RIF1-207ENST00000454583 OPRPNQ99935 248 aaPredicted RBP3.33□□□□□ -1.88
RIF1-207ENST00000454583 TPPP3Q9BW30 176 aa3.33□□□□□ -1.88
RIF1-207ENST00000454583 SPANXDQ9BXN6 97 aa3.33□□□□□ -1.88
RIF1-207ENST00000454583 NOP10Q9NPE3 64 aaKnown RBP3.33□□□□□ -1.88
RIF1-207ENST00000454583 DAZ3Q9NR90 486 aaKnown RBP3.33□□□□□ -1.88
RIF1-207ENST00000454583 SPANXCQ9NY87 97 aa3.33□□□□□ -1.88
RIF1-207ENST00000454583 A0A1B0GVY2 172 aa3.33□□□□□ -1.88
RIF1-207ENST00000454583 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.33□□□□□ -1.88
RIF1-207ENST00000454583 Q6ZTC4 211 aa3.33□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms