RNA–Protein interactions for RNA: ENST00000454220.6

PPP2R1A-203, Transcript of protein phosphatase 2 scaffold subunit Aalpha, humanhuman

TSL 1 (best)

Gene PPP2R1A, Length 1,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP2R1A-203ENST00000454220 MIAQ16674 131 aa10.4□□□□□ -0.74
PPP2R1A-203ENST00000454220 TMEM101Q96IK0 257 aa10.4□□□□□ -0.74
PPP2R1A-203ENST00000454220 CSDC2Q9Y534 153 aaKnown RBP10.4□□□□□ -0.74
PPP2R1A-203ENST00000454220 REG3AQ06141 175 aa10.39□□□□□ -0.75
PPP2R1A-203ENST00000454220 OR5A1Q8NGJ0 315 aa10.39□□□□□ -0.75
PPP2R1A-203ENST00000454220 TIMM21Q9BVV7 248 aa10.39□□□□□ -0.75
PPP2R1A-203ENST00000454220 KRTAP4-5Q9BYR2 181 aa10.39□□□□□ -0.75
PPP2R1A-203ENST00000454220 PSCAO43653 123 aa10.38□□□□□ -0.75
PPP2R1A-203ENST00000454220 IFI27P40305 119 aaPredicted RBP10.38□□□□□ -0.75
PPP2R1A-203ENST00000454220 ORMDL2Q53FV1 153 aa10.38□□□□□ -0.75
PPP2R1A-203ENST00000454220 IGKV2D-24A0A075B6R9 120 aa10.37□□□□□ -0.75
PPP2R1A-203ENST00000454220 DGAT2L7PQ6IED9 249 aa10.37□□□□□ -0.75
PPP2R1A-203ENST00000454220 PRSS3P2Q8NHM4 247 aa10.37□□□□□ -0.75
PPP2R1A-203ENST00000454220 C1orf43Q9BWL3 253 aa10.37□□□□□ -0.75
PPP2R1A-203ENST00000454220 CDC42SE2Q9NRR3 84 aa10.37□□□□□ -0.75
PPP2R1A-203ENST00000454220 UBE2D4Q9Y2X8 147 aa10.37□□□□□ -0.75
PPP2R1A-203ENST00000454220 APOBP04114 4563 aaKnown RBP10.37□□□□□ -0.75
PPP2R1A-203ENST00000454220 TRAV8-4A0A0B4J246 113 aa10.36□□□□□ -0.75
PPP2R1A-203ENST00000454220 COLCA2A8K830 154 aa10.36□□□□□ -0.75
PPP2R1A-203ENST00000454220 CLPSL2Q6UWE3 100 aa10.36□□□□□ -0.75
PPP2R1A-203ENST00000454220 ZNF664Q8N3J9 261 aa10.36□□□□□ -0.75
PPP2R1A-203ENST00000454220 SPANXA1Q9NS26 97 aa10.36□□□□□ -0.75
PPP2R1A-203ENST00000454220 LINC01546A6NGU7 62 aa10.35□□□□□ -0.75
PPP2R1A-203ENST00000454220 S100A1P23297 94 aa10.35□□□□□ -0.75
PPP2R1A-203ENST00000454220 G0S2P27469 103 aa10.35□□□□□ -0.75
PPP2R1A-203ENST00000454220 RPL39P62891 51 aaKnown RBP10.35□□□□□ -0.75
PPP2R1A-203ENST00000454220 EREGO14944 169 aa10.34□□□□□ -0.75
PPP2R1A-203ENST00000454220 C18orf32Q8TCD1 76 aa10.34□□□□□ -0.75
PPP2R1A-203ENST00000454220 CYSLTR1Q9Y271 337 aa10.34□□□□□ -0.75
PPP2R1A-203ENST00000454220 PYGO1Q9Y3Y4 419 aa10.34□□□□□ -0.75
PPP2R1A-203ENST00000454220 A0A087WTM6 91 aa10.33□□□□□ -0.76
PPP2R1A-203ENST00000454220 LRCOL1A6NCL2 159 aa10.33□□□□□ -0.76
PPP2R1A-203ENST00000454220 SCO1O75880 301 aa10.33□□□□□ -0.76
PPP2R1A-203ENST00000454220 MRPS36P82909 103 aaKnown RBP10.33□□□□□ -0.76
PPP2R1A-203ENST00000454220 KRTAP26-1Q6PEX3 210 aa10.33□□□□□ -0.76
PPP2R1A-203ENST00000454220 C16orf90A8MZG2 172 aa10.32□□□□□ -0.76
PPP2R1A-203ENST00000454220 C2orf66Q6UXQ4 117 aa10.32□□□□□ -0.76
PPP2R1A-203ENST00000454220 FA2HQ7L5A8 372 aa10.32□□□□□ -0.76
PPP2R1A-203ENST00000454220 MAPKAPK5-AS1Q8N8E1 139 aa10.32□□□□□ -0.76
PPP2R1A-203ENST00000454220 IGLV10-54A0A075B6I4 117 aa10.31□□□□□ -0.76
PPP2R1A-203ENST00000454220 IGKV3OR2-268A0A0C4DH90 116 aa10.31□□□□□ -0.76
PPP2R1A-203ENST00000454220 ATP6V1G1O75348 118 aa10.31□□□□□ -0.76
PPP2R1A-203ENST00000454220 DNAH5Q8TE73 4624 aa10.31□□□□□ -0.76
PPP2R1A-203ENST00000454220 LINC00959A0A1B0GUT2 108 aa10.3□□□□□ -0.76
PPP2R1A-203ENST00000454220 LINC01549A6NIU2 74 aa10.3□□□□□ -0.76
PPP2R1A-203ENST00000454220 CCL25O15444 150 aa10.3□□□□□ -0.76
PPP2R1A-203ENST00000454220 TRGC2P03986 189 aa10.3□□□□□ -0.76
PPP2R1A-203ENST00000454220 NPSP0C0P6 89 aa10.3□□□□□ -0.76
PPP2R1A-203ENST00000454220 RAB5BP61020 215 aa10.3□□□□□ -0.76
PPP2R1A-203ENST00000454220 Q6ZUT4 128 aa10.3□□□□□ -0.76
PPP2R1A-203ENST00000454220 FAM104AQ969W3 186 aa10.3□□□□□ -0.76
PPP2R1A-203ENST00000454220 AP5S1Q9NUS5 200 aa10.3□□□□□ -0.76
PPP2R1A-203ENST00000454220 LINC00614P0C842 121 aa10.29□□□□□ -0.76
PPP2R1A-203ENST00000454220 SS18Q15532 418 aa10.29□□□□□ -0.76
PPP2R1A-203ENST00000454220 BAALCQ8WXS3 180 aa10.29□□□□□ -0.76
PPP2R1A-203ENST00000454220 CHCHD10Q8WYQ3 142 aaPredicted RBP10.29□□□□□ -0.76
PPP2R1A-203ENST00000454220 TOMM6Q96B49 74 aa10.29□□□□□ -0.76
PPP2R1A-203ENST00000454220 IGLV4-3A0A075B6K6 122 aa10.27□□□□□ -0.77
PPP2R1A-203ENST00000454220 IGIPA6NJ69 53 aa10.27□□□□□ -0.77
PPP2R1A-203ENST00000454220 C1orf196B1AJZ1 125 aa10.27□□□□□ -0.77
PPP2R1A-203ENST00000454220 RNASE13Q5GAN3 156 aaKnown RBP10.27□□□□□ -0.77
PPP2R1A-203ENST00000454220 SPATA12Q7Z6I5 190 aa10.27□□□□□ -0.77
PPP2R1A-203ENST00000454220 URB1-AS1Q96HZ7 61 aa10.27□□□□□ -0.77
PPP2R1A-203ENST00000454220 TMEM141Q96I45 108 aa10.27□□□□□ -0.77
PPP2R1A-203ENST00000454220 OPRPNQ99935 248 aaPredicted RBP10.27□□□□□ -0.77
PPP2R1A-203ENST00000454220 GAGE12HA6NDE8 117 aa10.26□□□□□ -0.77
PPP2R1A-203ENST00000454220 CDK2AP2O75956 126 aa10.26□□□□□ -0.77
PPP2R1A-203ENST00000454220 WFDC2Q14508 124 aa10.26□□□□□ -0.77
PPP2R1A-203ENST00000454220 C14orf177Q52M58 125 aa10.26□□□□□ -0.77
PPP2R1A-203ENST00000454220 ERASQ7Z444 233 aa10.26□□□□□ -0.77
PPP2R1A-203ENST00000454220 Q8N814 137 aa10.26□□□□□ -0.77
PPP2R1A-203ENST00000454220 TIMM17AQ99595 171 aa10.26□□□□□ -0.77
PPP2R1A-203ENST00000454220 PGPEP1Q9NXJ5 209 aa10.26□□□□□ -0.77
PPP2R1A-203ENST00000454220 TRAV13-1A0A0B4J241 112 aa10.25□□□□□ -0.77
PPP2R1A-203ENST00000454220 LECT2O14960 151 aa10.25□□□□□ -0.77
PPP2R1A-203ENST00000454220 PAPPA-AS1Q5QFB9 102 aa10.25□□□□□ -0.77
PPP2R1A-203ENST00000454220 Q6ZN92 141 aa10.25□□□□□ -0.77
PPP2R1A-203ENST00000454220 NTN5Q8WTR8 489 aaPredicted RBP10.25□□□□□ -0.77
PPP2R1A-203ENST00000454220 CHCHD1Q96BP2 118 aaKnown RBP10.25□□□□□ -0.77
PPP2R1A-203ENST00000454220 USP17L23D6RBM5 183 aa10.24□□□□□ -0.77
PPP2R1A-203ENST00000454220 XCL1P47992 114 aa10.24□□□□□ -0.77
PPP2R1A-203ENST00000454220 KRTAP10-2P60368 255 aa10.24□□□□□ -0.77
PPP2R1A-203ENST00000454220 CDPF1Q6NVV7 123 aa10.24□□□□□ -0.77
PPP2R1A-203ENST00000454220 CD164L2Q6UWJ8 174 aa10.24□□□□□ -0.77
PPP2R1A-203ENST00000454220 SCGB3A1Q96QR1 104 aa10.24□□□□□ -0.77
PPP2R1A-203ENST00000454220 IFITM10A6NMD0 228 aa10.23□□□□□ -0.77
PPP2R1A-203ENST00000454220 FOXI1Q12951 378 aa10.23□□□□□ -0.77
PPP2R1A-203ENST00000454220 TEX43Q6ZNM6 134 aa10.23□□□□□ -0.77
PPP2R1A-203ENST00000454220 AMELXQ99217 191 aa10.23□□□□□ -0.77
PPP2R1A-203ENST00000454220 VCX2Q9H322 139 aa10.23□□□□□ -0.77
PPP2R1A-203ENST00000454220 A0A096LNJ9 63 aa10.22□□□□□ -0.77
PPP2R1A-203ENST00000454220 CFAP161Q6P656 301 aa10.22□□□□□ -0.77
PPP2R1A-203ENST00000454220 BAGE3Q86Y29 109 aa10.22□□□□□ -0.77
PPP2R1A-203ENST00000454220 C2orf88Q9BSF0 95 aa10.22□□□□□ -0.77
PPP2R1A-203ENST00000454220 HBDP02042 147 aa10.21□□□□□ -0.77
PPP2R1A-203ENST00000454220 LINC00173Q6ZV60 143 aa10.21□□□□□ -0.77
PPP2R1A-203ENST00000454220 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.19□□□□□ -0.78
PPP2R1A-203ENST00000454220 PRSS1P07477 247 aa10.19□□□□□ -0.78
PPP2R1A-203ENST00000454220 UBE2D1P51668 147 aa10.19□□□□□ -0.78
PPP2R1A-203ENST00000454220 PDZD11Q5EBL8 140 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms