RNA–Protein interactions for RNA: ENST00000454134.1

NCKIPSD-208, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 998 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-208ENST00000454134 XCL1P47992 114 aa10.5□□□□□ -0.73
NCKIPSD-208ENST00000454134 FOXI1Q12951 378 aa10.5□□□□□ -0.73
NCKIPSD-208ENST00000454134 PEA15Q15121 130 aa10.5□□□□□ -0.73
NCKIPSD-208ENST00000454134 LINC00959A0A1B0GUT2 108 aa10.49□□□□□ -0.73
NCKIPSD-208ENST00000454134 CIRBPQ14011 172 aaKnown RBP10.49□□□□□ -0.73
NCKIPSD-208ENST00000454134 NRACQ8N912 160 aa10.49□□□□□ -0.73
NCKIPSD-208ENST00000454134 DPH3Q96FX2 82 aa10.49□□□□□ -0.73
NCKIPSD-208ENST00000454134 SMIM27A0A1W2PRY6 76 aa10.48□□□□□ -0.73
NCKIPSD-208ENST00000454134 C7orf77A4D0Y5 90 aa10.48□□□□□ -0.73
NCKIPSD-208ENST00000454134 CCL25O15444 150 aa10.48□□□□□ -0.73
NCKIPSD-208ENST00000454134 CAMPP49913 170 aa10.48□□□□□ -0.73
NCKIPSD-208ENST00000454134 VCYO14598 125 aa10.47□□□□□ -0.73
NCKIPSD-208ENST00000454134 FCER1GP30273 86 aa10.47□□□□□ -0.73
NCKIPSD-208ENST00000454134 HNRNPA3P51991 378 aaKnown RBP10.47□□□□□ -0.73
NCKIPSD-208ENST00000454134 MRPL51Q4U2R6 128 aaKnown RBP10.47□□□□□ -0.73
NCKIPSD-208ENST00000454134 MRPL52Q86TS9 123 aaKnown RBP10.47□□□□□ -0.73
NCKIPSD-208ENST00000454134 CDC42SE2Q9NRR3 84 aa10.47□□□□□ -0.73
NCKIPSD-208ENST00000454134 A0A087WYN8 130 aa10.46□□□□□ -0.73
NCKIPSD-208ENST00000454134 GVQW2A0A096LPI5 108 aaPredicted RBP10.46□□□□□ -0.73
NCKIPSD-208ENST00000454134 SUMO2P61956 95 aaKnown RBP10.46□□□□□ -0.73
NCKIPSD-208ENST00000454134 COX6A2Q02221 97 aa10.46□□□□□ -0.73
NCKIPSD-208ENST00000454134 FAM104BQ5XKR9 115 aa10.46□□□□□ -0.73
NCKIPSD-208ENST00000454134 ZNF664Q8N3J9 261 aa10.46□□□□□ -0.73
NCKIPSD-208ENST00000454134 SPACA4Q8TDM5 124 aa10.46□□□□□ -0.73
NCKIPSD-208ENST00000454134 LINC00526Q96FQ7 95 aa10.45□□□□□ -0.74
NCKIPSD-208ENST00000454134 PPP1R17O96001 155 aa10.44□□□□□ -0.74
NCKIPSD-208ENST00000454134 SS18Q15532 418 aa10.44□□□□□ -0.74
NCKIPSD-208ENST00000454134 RNASE13Q5GAN3 156 aaKnown RBP10.44□□□□□ -0.74
NCKIPSD-208ENST00000454134 MRPL54Q6P161 138 aaKnown RBP10.44□□□□□ -0.74
NCKIPSD-208ENST00000454134 PRSS3P2Q8NHM4 247 aa10.44□□□□□ -0.74
NCKIPSD-208ENST00000454134 SMDT1Q9H4I9 107 aa10.44□□□□□ -0.74
NCKIPSD-208ENST00000454134 KIR2DL4Q99706 377 aa10.43□□□□□ -0.74
NCKIPSD-208ENST00000454134 IGHV1-58A0A0C4DH39 117 aa10.42□□□□□ -0.74
NCKIPSD-208ENST00000454134 IGKV2-24A0A0C4DH68 120 aa10.42□□□□□ -0.74
NCKIPSD-208ENST00000454134 PPP1R2P9O14990 202 aa10.42□□□□□ -0.74
NCKIPSD-208ENST00000454134 CKS2P33552 79 aa10.42□□□□□ -0.74
NCKIPSD-208ENST00000454134 CD164L2Q6UWJ8 174 aa10.42□□□□□ -0.74
NCKIPSD-208ENST00000454134 UBE2D4Q9Y2X8 147 aa10.42□□□□□ -0.74
NCKIPSD-208ENST00000454134 LRP1Q07954 4544 aaKnown RBP10.42□□□□□ -0.74
NCKIPSD-208ENST00000454134 A0A1B0GW15 77 aa10.41□□□□□ -0.74
NCKIPSD-208ENST00000454134 MAJINQ3KP22 176 aa10.41□□□□□ -0.74
NCKIPSD-208ENST00000454134 PLAC8Q9NZF1 115 aa10.41□□□□□ -0.74
NCKIPSD-208ENST00000454134 A0A1B0GXF2 115 aa10.4□□□□□ -0.74
NCKIPSD-208ENST00000454134 LINC00862A6NCI5 91 aa10.4□□□□□ -0.74
NCKIPSD-208ENST00000454134 TNFRSF6BO95407 300 aa10.4□□□□□ -0.74
NCKIPSD-208ENST00000454134 OXTP01178 125 aa10.4□□□□□ -0.74
NCKIPSD-208ENST00000454134 HBBP68871 147 aa10.4□□□□□ -0.74
NCKIPSD-208ENST00000454134 Q6ZUT4 128 aa10.4□□□□□ -0.74
NCKIPSD-208ENST00000454134 C20orf78Q9BR46 151 aa10.4□□□□□ -0.74
NCKIPSD-208ENST00000454134 CSDC2Q9Y534 153 aaKnown RBP10.4□□□□□ -0.74
NCKIPSD-208ENST00000454134 TRBV24-1A0A075B6N3 115 aa10.39□□□□□ -0.75
NCKIPSD-208ENST00000454134 A0A096LNI7 61 aa10.39□□□□□ -0.75
NCKIPSD-208ENST00000454134 TRAV13-1A0A0B4J241 112 aa10.39□□□□□ -0.75
NCKIPSD-208ENST00000454134 D6R8Y8 96 aa10.39□□□□□ -0.75
NCKIPSD-208ENST00000454134 F8W036 122 aa10.38□□□□□ -0.75
NCKIPSD-208ENST00000454134 NPYP01303 97 aa10.38□□□□□ -0.75
NCKIPSD-208ENST00000454134 S100A8P05109 93 aa10.38□□□□□ -0.75
NCKIPSD-208ENST00000454134 RPL39P62891 51 aaKnown RBP10.38□□□□□ -0.75
NCKIPSD-208ENST00000454134 CARD19Q96LW7 228 aa10.38□□□□□ -0.75
NCKIPSD-208ENST00000454134 PKHD1L1Q86WI1 4243 aa10.37□□□□□ -0.75
NCKIPSD-208ENST00000454134 C1orf196B1AJZ1 125 aa10.37□□□□□ -0.75
NCKIPSD-208ENST00000454134 ZNF561-AS1K7EIQ3 104 aa10.37□□□□□ -0.75
NCKIPSD-208ENST00000454134 PHOX2AO14813 284 aa10.37□□□□□ -0.75
NCKIPSD-208ENST00000454134 SMAGPQ0VAQ4 97 aa10.37□□□□□ -0.75
NCKIPSD-208ENST00000454134 STPG4Q8N801 248 aa10.37□□□□□ -0.75
NCKIPSD-208ENST00000454134 SMIM2Q9BVW6 85 aa10.37□□□□□ -0.75
NCKIPSD-208ENST00000454134 COX7A2LO14548 114 aa10.36□□□□□ -0.75
NCKIPSD-208ENST00000454134 MALP21145 153 aa10.36□□□□□ -0.75
NCKIPSD-208ENST00000454134 RPL32P62910 135 aaKnown RBP10.36□□□□□ -0.75
NCKIPSD-208ENST00000454134 SYCNQ0VAF6 134 aa10.36□□□□□ -0.75
NCKIPSD-208ENST00000454134 TMEM18Q96B42 140 aa10.36□□□□□ -0.75
NCKIPSD-208ENST00000454134 TIMM21Q9BVV7 248 aa10.36□□□□□ -0.75
NCKIPSD-208ENST00000454134 FAT3Q8TDW7 4589 aa10.35□□□□□ -0.75
NCKIPSD-208ENST00000454134 IGLV4-69A0A075B6H9 119 aa10.35□□□□□ -0.75
NCKIPSD-208ENST00000454134 TCAPO15273 167 aa10.35□□□□□ -0.75
NCKIPSD-208ENST00000454134 C5orf38Q86SI9 138 aa10.35□□□□□ -0.75
NCKIPSD-208ENST00000454134 C7orf33Q8WU49 177 aa10.35□□□□□ -0.75
NCKIPSD-208ENST00000454134 FAM104AQ969W3 186 aa10.34□□□□□ -0.75
NCKIPSD-208ENST00000454134 OPRPNQ99935 248 aaPredicted RBP10.34□□□□□ -0.75
NCKIPSD-208ENST00000454134 PPBPP02775 128 aa10.33□□□□□ -0.76
NCKIPSD-208ENST00000454134 Q6ZRU5 148 aa10.33□□□□□ -0.76
NCKIPSD-208ENST00000454134 TMEM136Q6ZRR5 245 aa10.32□□□□□ -0.76
NCKIPSD-208ENST00000454134 ATP5L2Q7Z4Y8 100 aa10.32□□□□□ -0.76
NCKIPSD-208ENST00000454134 ORMDL3Q8N138 153 aa10.32□□□□□ -0.76
NCKIPSD-208ENST00000454134 RAB14P61106 215 aa10.31□□□□□ -0.76
NCKIPSD-208ENST00000454134 PRELID3AQ96N28 172 aa10.31□□□□□ -0.76
NCKIPSD-208ENST00000454134 SPANXA1Q9NS26 97 aa10.31□□□□□ -0.76
NCKIPSD-208ENST00000454134 LINC00474Q9P2X8 69 aa10.31□□□□□ -0.76
NCKIPSD-208ENST00000454134 CAMK2N2Q96S95 79 aa10.3□□□□□ -0.76
NCKIPSD-208ENST00000454134 PKIGQ9Y2B9 76 aa10.3□□□□□ -0.76
NCKIPSD-208ENST00000454134 MT-ND4LP03901 98 aa10.29□□□□□ -0.76
NCKIPSD-208ENST00000454134 RAB5AP20339 215 aa10.29□□□□□ -0.76
NCKIPSD-208ENST00000454134 PRR3P79522 188 aaKnown RBP10.29□□□□□ -0.76
NCKIPSD-208ENST00000454134 PNRC1Q12796 327 aaPredicted RBP10.29□□□□□ -0.76
NCKIPSD-208ENST00000454134 GAGE2BQ13066 116 aa10.29□□□□□ -0.76
NCKIPSD-208ENST00000454134 SERTAD4-AS1Q5TG53 156 aa10.29□□□□□ -0.76
NCKIPSD-208ENST00000454134 LOC107984640A0A0U1RRK4 108 aa10.28□□□□□ -0.76
NCKIPSD-208ENST00000454134 LOC389332A0A1B0GUA5 103 aa10.28□□□□□ -0.76
NCKIPSD-208ENST00000454134 IFITM10A6NMD0 228 aa10.28□□□□□ -0.76
NCKIPSD-208ENST00000454134 APOMO95445 188 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms