RNA–Protein interactions for RNA: ENST00000449537.1

AC004540.1-204, humanhuman

TSL 2 BASIC

Gene AC004540.1, Length 727 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004540.1-204ENST00000449537 FAM74A4Q5TZK3 123 aa7.95□□□□□ -1.14
AC004540.1-204ENST00000449537 UFSP1Q6NVU6 142 aa7.95□□□□□ -1.14
AC004540.1-204ENST00000449537 C7orf33Q8WU49 177 aa7.95□□□□□ -1.14
AC004540.1-204ENST00000449537 UBE2WQ96B02 151 aa7.95□□□□□ -1.14
AC004540.1-204ENST00000449537 KLK12Q9UKR0 248 aa7.95□□□□□ -1.14
AC004540.1-204ENST00000449537 ZNF56Q15929 161 aa7.94□□□□□ -1.14
AC004540.1-204ENST00000449537 KIAA1644Q3SXP7 199 aa7.94□□□□□ -1.14
AC004540.1-204ENST00000449537 FAM104BQ5XKR9 115 aa7.94□□□□□ -1.14
AC004540.1-204ENST00000449537 ORMDL3Q8N138 153 aa7.94□□□□□ -1.14
AC004540.1-204ENST00000449537 MRAP2Q96G30 205 aa7.94□□□□□ -1.14
AC004540.1-204ENST00000449537 LAMTOR2Q9Y2Q5 125 aa7.94□□□□□ -1.14
AC004540.1-204ENST00000449537 KIF25-AS1Q9Y6Z4 181 aa7.94□□□□□ -1.14
AC004540.1-204ENST00000449537 A0A087WYN8 130 aa7.93□□□□□ -1.14
AC004540.1-204ENST00000449537 LOC105371267A0A1B0GV96 52 aa7.93□□□□□ -1.14
AC004540.1-204ENST00000449537 AKR1D1P51857 326 aa7.93□□□□□ -1.14
AC004540.1-204ENST00000449537 SSTP61278 116 aa7.93□□□□□ -1.14
AC004540.1-204ENST00000449537 CIRBPQ14011 172 aaKnown RBP7.93□□□□□ -1.14
AC004540.1-204ENST00000449537 C14orf178Q8N769 122 aaPredicted RBP7.93□□□□□ -1.14
AC004540.1-204ENST00000449537 TMEM18Q96B42 140 aa7.93□□□□□ -1.14
AC004540.1-204ENST00000449537 A0A087WWL8 130 aa7.92□□□□□ -1.14
AC004540.1-204ENST00000449537 MUC21A0A0G2JKD1 596 aa7.92□□□□□ -1.14
AC004540.1-204ENST00000449537 MUC21A0A140T8X8 626 aa7.92□□□□□ -1.14
AC004540.1-204ENST00000449537 PRSS1P07477 247 aa7.92□□□□□ -1.14
AC004540.1-204ENST00000449537 MGPP08493 103 aa7.92□□□□□ -1.14
AC004540.1-204ENST00000449537 CKS2P33552 79 aa7.92□□□□□ -1.14
AC004540.1-204ENST00000449537 SPINK6Q6UWN8 80 aa7.92□□□□□ -1.14
AC004540.1-204ENST00000449537 RNF185Q96GF1 192 aa7.92□□□□□ -1.14
AC004540.1-204ENST00000449537 ALKBH7Q9BT30 221 aaPredicted RBP7.92□□□□□ -1.14
AC004540.1-204ENST00000449537 SAMD10Q9BYL1 202 aa7.92□□□□□ -1.14
AC004540.1-204ENST00000449537 FSIP2Q5CZC0 6907 aa7.92□□□□□ -1.14
AC004540.1-204ENST00000449537 D6R8Y8 96 aa7.91□□□□□ -1.14
AC004540.1-204ENST00000449537 USP17L23D6RBM5 183 aa7.91□□□□□ -1.14
AC004540.1-204ENST00000449537 F5H697 171 aa7.91□□□□□ -1.14
AC004540.1-204ENST00000449537 NIT1Q86X76 327 aa7.91□□□□□ -1.14
AC004540.1-204ENST00000449537 AMN1Q8IY45 258 aa7.91□□□□□ -1.14
AC004540.1-204ENST00000449537 PRELID3AQ96N28 172 aa7.91□□□□□ -1.14
AC004540.1-204ENST00000449537 HSBP1O75506 76 aa7.9□□□□□ -1.14
AC004540.1-204ENST00000449537 RPL36AP83881 106 aaKnown RBP7.9□□□□□ -1.14
AC004540.1-204ENST00000449537 MRPL51Q4U2R6 128 aaKnown RBP7.9□□□□□ -1.14
AC004540.1-204ENST00000449537 LCE2DQ5TA82 110 aaPredicted RBP7.9□□□□□ -1.14
AC004540.1-204ENST00000449537 SUMO4Q6EEV6 95 aa7.9□□□□□ -1.14
AC004540.1-204ENST00000449537 RNASEKQ6P5S7 137 aaKnown RBP7.9□□□□□ -1.14
AC004540.1-204ENST00000449537 FA2HQ7L5A8 372 aa7.9□□□□□ -1.14
AC004540.1-204ENST00000449537 HIST3H2BBQ8N257 126 aa7.9□□□□□ -1.14
AC004540.1-204ENST00000449537 C18orf32Q8TCD1 76 aa7.9□□□□□ -1.14
AC004540.1-204ENST00000449537 RPL36ALQ969Q0 106 aaKnown RBP7.9□□□□□ -1.14
AC004540.1-204ENST00000449537 CHCHD1Q96BP2 118 aaKnown RBP7.9□□□□□ -1.14
AC004540.1-204ENST00000449537 C1orf43Q9BWL3 253 aa7.9□□□□□ -1.14
AC004540.1-204ENST00000449537 MAP1LC3AQ9H492 121 aa7.9□□□□□ -1.14
AC004540.1-204ENST00000449537 JPT2Q9H910 190 aa7.9□□□□□ -1.14
AC004540.1-204ENST00000449537 SERF1AO75920 110 aa7.89□□□□□ -1.15
AC004540.1-204ENST00000449537 ESDP10768 282 aa7.89□□□□□ -1.15
AC004540.1-204ENST00000449537 RAB4AP20338 218 aa7.89□□□□□ -1.15
AC004540.1-204ENST00000449537 PMCHP20382 165 aa7.89□□□□□ -1.15
AC004540.1-204ENST00000449537 PRR3P79522 188 aaKnown RBP7.89□□□□□ -1.15
AC004540.1-204ENST00000449537 PDZD11Q5EBL8 140 aa7.89□□□□□ -1.15
AC004540.1-204ENST00000449537 TRBV7-3A0A075B6L6 115 aa7.88□□□□□ -1.15
AC004540.1-204ENST00000449537 IGHV3-73A0A0B4J1V6 119 aa7.88□□□□□ -1.15
AC004540.1-204ENST00000449537 M0QY20 66 aa7.88□□□□□ -1.15
AC004540.1-204ENST00000449537 FABP4P15090 132 aa7.88□□□□□ -1.15
AC004540.1-204ENST00000449537 TMEM97Q5BJF2 176 aa7.88□□□□□ -1.15
AC004540.1-204ENST00000449537 PRSS3P2Q8NHM4 247 aa7.88□□□□□ -1.15
AC004540.1-204ENST00000449537 PACRGQ96M98 296 aaPredicted RBP7.88□□□□□ -1.15
AC004540.1-204ENST00000449537 NIT2Q9NQR4 276 aa7.88□□□□□ -1.15
AC004540.1-204ENST00000449537 TRBV6-5A0A0K0K1A5 114 aa7.87□□□□□ -1.15
AC004540.1-204ENST00000449537 TCAPO15273 167 aa7.87□□□□□ -1.15
AC004540.1-204ENST00000449537 LINC00694P0DN24 101 aa7.87□□□□□ -1.15
AC004540.1-204ENST00000449537 AMTP48728 403 aa7.87□□□□□ -1.15
AC004540.1-204ENST00000449537 RPL32P62910 135 aaKnown RBP7.87□□□□□ -1.15
AC004540.1-204ENST00000449537 C20orf78Q9BR46 151 aa7.87□□□□□ -1.15
AC004540.1-204ENST00000449537 NXT2Q9NPJ8 142 aaKnown RBP7.87□□□□□ -1.15
AC004540.1-204ENST00000449537 PLAC8Q9NZF1 115 aa7.87□□□□□ -1.15
AC004540.1-204ENST00000449537 A0A087WX48 190 aa7.86□□□□□ -1.15
AC004540.1-204ENST00000449537 GAGE12JA6NER3 117 aa7.86□□□□□ -1.15
AC004540.1-204ENST00000449537 CHTF8P0CG12 524 aa7.86□□□□□ -1.15
AC004540.1-204ENST00000449537 SMIM6P0DI80 62 aa7.86□□□□□ -1.15
AC004540.1-204ENST00000449537 GAGE1Q13065 139 aa7.86□□□□□ -1.15
AC004540.1-204ENST00000449537 GAGE4Q13068 117 aa7.86□□□□□ -1.15
AC004540.1-204ENST00000449537 GAGE5Q13069 117 aa7.86□□□□□ -1.15
AC004540.1-204ENST00000449537 IQCJQ1A5X6 159 aa7.86□□□□□ -1.15
AC004540.1-204ENST00000449537 GAGE13Q4V321 117 aa7.86□□□□□ -1.15
AC004540.1-204ENST00000449537 AP5S1Q9NUS5 200 aa7.86□□□□□ -1.15
AC004540.1-204ENST00000449537 K7EMI3 77 aa7.85□□□□□ -1.15
AC004540.1-204ENST00000449537 NCR2O95944 276 aa7.85□□□□□ -1.15
AC004540.1-204ENST00000449537 LINC00614P0C842 121 aa7.85□□□□□ -1.15
AC004540.1-204ENST00000449537 NEXN-AS1Q8NBZ9 246 aa7.85□□□□□ -1.15
AC004540.1-204ENST00000449537 HIST1H2BLQ99880 126 aa7.85□□□□□ -1.15
AC004540.1-204ENST00000449537 IGHV3-64A0A075B6Q5 118 aa7.84□□□□□ -1.15
AC004540.1-204ENST00000449537 TNFRSF6BO95407 300 aa7.84□□□□□ -1.15
AC004540.1-204ENST00000449537 NPYP01303 97 aa7.84□□□□□ -1.15
AC004540.1-204ENST00000449537 UBE2D3P61077 147 aa7.84□□□□□ -1.15
AC004540.1-204ENST00000449537 PKIAP61925 76 aa7.84□□□□□ -1.15
AC004540.1-204ENST00000449537 SUMO2P61956 95 aaKnown RBP7.84□□□□□ -1.15
AC004540.1-204ENST00000449537 UBE2D2P62837 147 aa7.84□□□□□ -1.15
AC004540.1-204ENST00000449537 SRSF9Q13242 221 aaKnown RBP eCLIP7.84□□□□□ -1.15
AC004540.1-204ENST00000449537 OR10D4PQ8NGN7 298 aa7.84□□□□□ -1.15
AC004540.1-204ENST00000449537 SPACA4Q8TDM5 124 aa7.84□□□□□ -1.15
AC004540.1-204ENST00000449537 CHCHD7Q9BUK0 85 aa7.84□□□□□ -1.15
AC004540.1-204ENST00000449537 ST20Q9HBF5 79 aa7.84□□□□□ -1.15
AC004540.1-204ENST00000449537 TRAV26-2A0A0B4J265 109 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms