RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 DEFB104AQ8WTQ1 72 aa9.7□□□□□ -0.86
SHMT2-203ENST00000449049 FCER1GP30273 86 aa9.7□□□□□ -0.86
SHMT2-203ENST00000449049 VAMP3Q15836 100 aa9.7□□□□□ -0.86
SHMT2-203ENST00000449049 CHCHD1Q96BP2 118 aaKnown RBP9.7□□□□□ -0.86
SHMT2-203ENST00000449049 TRBV6-8A0A0A6YYG3 113 aa9.69□□□□□ -0.86
SHMT2-203ENST00000449049 RNASEKQ6P5S7 137 aaKnown RBP9.69□□□□□ -0.86
SHMT2-203ENST00000449049 AP5S1Q9NUS5 200 aa9.69□□□□□ -0.86
SHMT2-203ENST00000449049 ESRGQ1W209 222 aa9.68□□□□□ -0.86
SHMT2-203ENST00000449049 ORMDL2Q53FV1 153 aa9.68□□□□□ -0.86
SHMT2-203ENST00000449049 CHCHD7Q9BUK0 85 aa9.68□□□□□ -0.86
SHMT2-203ENST00000449049 DNAH7Q8WXX0 4024 aa9.68□□□□□ -0.86
SHMT2-203ENST00000449049 LAGE3Q14657 143 aa9.68□□□□□ -0.86
SHMT2-203ENST00000449049 TRBV25-1A0A075B6N4 114 aa9.67□□□□□ -0.86
SHMT2-203ENST00000449049 IGHV1-24A0A0C4DH33 117 aa9.67□□□□□ -0.86
SHMT2-203ENST00000449049 LELP1Q5T871 98 aa9.67□□□□□ -0.86
SHMT2-203ENST00000449049 DYNC2H1Q8NCM8 4307 aaKnown RBP9.67□□□□□ -0.86
SHMT2-203ENST00000449049 A0A1B0GV72 72 aa9.67□□□□□ -0.86
SHMT2-203ENST00000449049 C3orf84H3BNL1 204 aa9.67□□□□□ -0.86
SHMT2-203ENST00000449049 TAX1BP3O14907 124 aa9.67□□□□□ -0.86
SHMT2-203ENST00000449049 SCGB1A1P11684 91 aa9.67□□□□□ -0.86
SHMT2-203ENST00000449049 SPATA12Q7Z6I5 190 aa9.67□□□□□ -0.86
SHMT2-203ENST00000449049 MPV17L2Q567V2 206 aa9.65□□□□□ -0.86
SHMT2-203ENST00000449049 TMEM243Q9BU79 118 aa9.65□□□□□ -0.86
SHMT2-203ENST00000449049 CASC10Q5T4H9 136 aa9.65□□□□□ -0.86
SHMT2-203ENST00000449049 C20orf203Q8NBC4 194 aa9.65□□□□□ -0.86
SHMT2-203ENST00000449049 A0A096LNJ9 63 aa9.64□□□□□ -0.87
SHMT2-203ENST00000449049 CCL18P55774 89 aa9.64□□□□□ -0.87
SHMT2-203ENST00000449049 BVES-AS1Q5T3Y7 98 aa9.64□□□□□ -0.87
SHMT2-203ENST00000449049 LINC00588Q9Y4M8 146 aa9.64□□□□□ -0.87
SHMT2-203ENST00000449049 STARD9Q9P2P6 4700 aa9.63□□□□□ -0.87
SHMT2-203ENST00000449049 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-203ENST00000449049 IGKV2-29A2NJV5 120 aaPredicted RBP9.63□□□□□ -0.87
SHMT2-203ENST00000449049 H7C423 109 aa9.63□□□□□ -0.87
SHMT2-203ENST00000449049 CSMD3Q7Z407 3707 aa9.63□□□□□ -0.87
SHMT2-203ENST00000449049 TRAV8-6A0A0B4J262 113 aa9.62□□□□□ -0.87
SHMT2-203ENST00000449049 SYS1-DBNDD2H3BUS1 97 aa9.62□□□□□ -0.87
SHMT2-203ENST00000449049 HBDP02042 147 aa9.62□□□□□ -0.87
SHMT2-203ENST00000449049 SLC25A34Q6PIV7 304 aa9.62□□□□□ -0.87
SHMT2-203ENST00000449049 C2orf66Q6UXQ4 117 aa9.62□□□□□ -0.87
SHMT2-203ENST00000449049 CHCHD5Q9BSY4 110 aa9.62□□□□□ -0.87
SHMT2-203ENST00000449049 CYSLTR1Q9Y271 337 aa9.62□□□□□ -0.87
SHMT2-203ENST00000449049 TGP01266 2768 aa9.62□□□□□ -0.87
SHMT2-203ENST00000449049 RPL39P62891 51 aaKnown RBP9.62□□□□□ -0.87
SHMT2-203ENST00000449049 TOMM6Q96B49 74 aa9.62□□□□□ -0.87
SHMT2-203ENST00000449049 UPK3BQ9BT76 320 aa9.62□□□□□ -0.87
SHMT2-203ENST00000449049 UBE2L6O14933 153 aa9.61□□□□□ -0.87
SHMT2-203ENST00000449049 AMMECR1LQ6DCA0 310 aa9.61□□□□□ -0.87
SHMT2-203ENST00000449049 LINC01549A6NIU2 74 aa9.61□□□□□ -0.87
SHMT2-203ENST00000449049 GAGE6Q13070 117 aa9.61□□□□□ -0.87
SHMT2-203ENST00000449049 WFDC10BQ8IUB3 73 aa9.61□□□□□ -0.87
SHMT2-203ENST00000449049 UBE2D4Q9Y2X8 147 aa9.61□□□□□ -0.87
SHMT2-203ENST00000449049 ERASQ7Z444 233 aa9.6□□□□□ -0.87
SHMT2-203ENST00000449049 TIMM21Q9BVV7 248 aa9.6□□□□□ -0.87
SHMT2-203ENST00000449049 hDV102S1A0JD36 115 aa9.59□□□□□ -0.87
SHMT2-203ENST00000449049 LEPROTL1O95214 131 aa9.59□□□□□ -0.87
SHMT2-203ENST00000449049 FGF6P10767 208 aa9.59□□□□□ -0.87
SHMT2-203ENST00000449049 PET117Q6UWS5 81 aa9.59□□□□□ -0.87
SHMT2-203ENST00000449049 TP73-AS1Q9UF72 201 aa9.59□□□□□ -0.87
SHMT2-203ENST00000449049 LINC00173Q6ZV60 143 aa9.59□□□□□ -0.87
SHMT2-203ENST00000449049 SPANXA1Q9NS26 97 aa9.59□□□□□ -0.87
SHMT2-203ENST00000449049 PYGO1Q9Y3Y4 419 aa9.59□□□□□ -0.87
SHMT2-203ENST00000449049 IGIPA6NJ69 53 aa9.58□□□□□ -0.88
SHMT2-203ENST00000449049 SMAGPQ0VAQ4 97 aa9.58□□□□□ -0.88
SHMT2-203ENST00000449049 UBE2DNLQ8IWF7 75 aa9.58□□□□□ -0.88
SHMT2-203ENST00000449049 CSDC2Q9Y534 153 aaKnown RBP9.58□□□□□ -0.88
SHMT2-203ENST00000449049 A0A1B0GUV1 79 aa9.58□□□□□ -0.88
SHMT2-203ENST00000449049 TMEM262E9PQX1 116 aa9.58□□□□□ -0.88
SHMT2-203ENST00000449049 PLECQ15149 4684 aaKnown RBP9.57□□□□□ -0.88
SHMT2-203ENST00000449049 DNAH10OSP0CZ25 163 aa9.57□□□□□ -0.88
SHMT2-203ENST00000449049 TIMM17AQ99595 171 aa9.57□□□□□ -0.88
SHMT2-203ENST00000449049 MAP1LC3CQ9BXW4 147 aa9.57□□□□□ -0.88
SHMT2-203ENST00000449049 SIVA1O15304 175 aa9.56□□□□□ -0.88
SHMT2-203ENST00000449049 LINC01556Q5JQF7 62 aa9.56□□□□□ -0.88
SHMT2-203ENST00000449049 Q8N3U1 123 aa9.56□□□□□ -0.88
SHMT2-203ENST00000449049 FAM104AQ969W3 186 aa9.56□□□□□ -0.88
SHMT2-203ENST00000449049 SCGB3A1Q96QR1 104 aa9.56□□□□□ -0.88
SHMT2-203ENST00000449049 A0A087WX48 190 aa9.56□□□□□ -0.88
SHMT2-203ENST00000449049 LGALS9CQ6DKI2 356 aa9.56□□□□□ -0.88
SHMT2-203ENST00000449049 PMCHL2Q9BQD1 86 aa9.56□□□□□ -0.88
SHMT2-203ENST00000449049 IGLV4-60A0A075B6I1 120 aa9.55□□□□□ -0.88
SHMT2-203ENST00000449049 MRPS36P82909 103 aaKnown RBP9.55□□□□□ -0.88
SHMT2-203ENST00000449049 OR5A1Q8NGJ0 315 aa9.55□□□□□ -0.88
SHMT2-203ENST00000449049 TMEM141Q96I45 108 aa9.55□□□□□ -0.88
SHMT2-203ENST00000449049 TMEM101Q96IK0 257 aa9.55□□□□□ -0.88
SHMT2-203ENST00000449049 HSPB8Q9UJY1 196 aa9.55□□□□□ -0.88
SHMT2-203ENST00000449049 IGLV4-3A0A075B6K6 122 aa9.55□□□□□ -0.88
SHMT2-203ENST00000449049 ATP5LO75964 103 aa9.55□□□□□ -0.88
SHMT2-203ENST00000449049 DGAT2L7PQ6IED9 249 aa9.55□□□□□ -0.88
SHMT2-203ENST00000449049 Q9H8V8 135 aa9.55□□□□□ -0.88
SHMT2-203ENST00000449049 IGHV3-30P01768 117 aa9.54□□□□□ -0.88
SHMT2-203ENST00000449049 IGHV3-33P01772 117 aa9.54□□□□□ -0.88
SHMT2-203ENST00000449049 IGHV3-30-3P0DP02 117 aa9.54□□□□□ -0.88
SHMT2-203ENST00000449049 IGHV3-30-5P0DP03 117 aa9.54□□□□□ -0.88
SHMT2-203ENST00000449049 COX8AP10176 69 aa9.54□□□□□ -0.88
SHMT2-203ENST00000449049 LINC01545Q5VT33 79 aa9.54□□□□□ -0.88
SHMT2-203ENST00000449049 Q6ZUT4 128 aa9.54□□□□□ -0.88
SHMT2-203ENST00000449049 OPRPNQ99935 248 aaPredicted RBP9.54□□□□□ -0.88
SHMT2-203ENST00000449049 CDC42SE2Q9NRR3 84 aa9.54□□□□□ -0.88
SHMT2-203ENST00000449049 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.53□□□□□ -0.88
SHMT2-203ENST00000449049 SEC11AP67812 179 aa9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms