RNA–Protein interactions for RNA: ENST00000443621.1

LINC00393-201, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 282 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-201ENST00000443621 LEPROTO15243 131 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 GAGE7O76087 117 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 GAGE12FP0CL80 117 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 GAGE12GP0CL81 117 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 GAGE12IP0CL82 117 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 IFITM1P13164 125 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 RPL35AP18077 110 aaKnown RBP1.99□□□□□ -2.09
LINC00393-201ENST00000443621 UBE2D1P51668 147 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 TCTAP57738 103 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 DAD1P61803 113 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 HERV-K104P63124 156 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 VAMP3Q15836 100 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 CDPF1Q6NVV7 123 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 NEGR1Q7Z3B1 354 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 PRIMA1Q86XR5 153 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 C15orf53Q8NAA6 179 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 OR5A1Q8NGJ0 315 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 ATP6V0E2Q8NHE4 81 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 ORAOV1Q8WV07 137 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 SPATA25Q9BR10 227 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 TM2D3Q9BRN9 247 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 MRPL16Q9NX20 251 aaKnown RBP1.99□□□□□ -2.09
LINC00393-201ENST00000443621 FBN1P35555 2871 aaKnown RBP1.99□□□□□ -2.09
LINC00393-201ENST00000443621 FLNBO75369 2602 aaKnown RBP1.99□□□□□ -2.09
LINC00393-201ENST00000443621 BAHCC1Q9P281 2608 aa1.99□□□□□ -2.09
LINC00393-201ENST00000443621 ATRQ13535 2644 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 IGHV3OR16-12A0A075B7B8 117 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.98□□□□□ -2.09
LINC00393-201ENST00000443621 IGHV4-28A0A0C4DH34 117 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 A0A1B0GWB2 263 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 hDV102S1A0JD36 115 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 TMEM238C9JI98 176 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 J3QQQ9 107 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 PAX4O43316 350 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 NHLRC4P0CG21 123 aaPredicted RBP1.98□□□□□ -2.09
LINC00393-201ENST00000443621 PRB4P10163 310 aaPredicted RBP1.98□□□□□ -2.09
LINC00393-201ENST00000443621 CXCL5P42830 114 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 RPL39P62891 51 aaKnown RBP1.98□□□□□ -2.09
LINC00393-201ENST00000443621 CIRBPQ14011 172 aaKnown RBP1.98□□□□□ -2.09
LINC00393-201ENST00000443621 COX17Q14061 63 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 BVES-AS1Q5T3Y7 98 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 LELP1Q5T871 98 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 FAM222AQ5U5X8 452 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 ZFAND6Q6FIF0 208 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 NTM-AS1Q6ZSK4 140 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 Q6ZSN1 163 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 C2orf91Q6ZV80 131 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 STPG4Q8N801 248 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 FAM104AQ969W3 186 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 VSIG2Q96IQ7 327 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 CHAC1Q9BUX1 264 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 SNHG12Q9BXW3 62 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 WFDC10AQ9H1F0 79 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 PRO1933Q9H354 126 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 ICOSQ9Y6W8 199 aa1.98□□□□□ -2.09
LINC00393-201ENST00000443621 ANK2Q01484 3957 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 SETD2Q9BYW2 2564 aaPredicted RBP1.97□□□□□ -2.09
LINC00393-201ENST00000443621 A0A087WZ39 114 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 IGHV3OR16-9A0A0B4J2B5 98 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 LOC107984156A0A0G2JMH3 177 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 A0A0J9YY99 117 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 LOC100996750A0A140TA64 210 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 GAGE12JA6NER3 117 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 NDUFA1O15239 70 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 VPREB1P12018 145 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 GYPEP15421 78 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 ZNF22P17026 224 aaPredicted RBP1.97□□□□□ -2.09
LINC00393-201ENST00000443621 LGALS3P17931 250 aaKnown RBP1.97□□□□□ -2.09
LINC00393-201ENST00000443621 KRTAP10-11P60412 298 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 RPL24P83731 157 aaKnown RBP1.97□□□□□ -2.09
LINC00393-201ENST00000443621 GAGE4Q13068 117 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 GAGE5Q13069 117 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 SS18Q15532 418 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 RNF151Q2KHN1 245 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 DEFB135Q30KP9 77 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 GAGE13Q4V321 117 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 MPV17L2Q567V2 206 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 TMEM170BQ5T4T1 132 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 LINC00242Q5T6M2 205 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 LYRM7Q5U5X0 104 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 AMMECR1LQ6DCA0 310 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 ARL17AQ8IVW1 177 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 ATOH7Q8N100 152 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 CEND1Q8N111 149 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 SPANXDQ9BXN6 97 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 KRTAP4-6Q9BYQ5 205 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 PRR34Q9NV39 138 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 SPANXCQ9NY87 97 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 SELENOKQ9Y6D0 94 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 DNAH3Q8TD57 4116 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 MAST4O15021 2626 aa1.97□□□□□ -2.09
LINC00393-201ENST00000443621 TRRAPQ9Y4A5 3859 aa1.96□□□□□ -2.1
LINC00393-201ENST00000443621 A0A096LPF7 62 aa1.96□□□□□ -2.1
LINC00393-201ENST00000443621 IGKV2D-26A0A0A0MRZ7 120 aa1.96□□□□□ -2.1
LINC00393-201ENST00000443621 IGHV3-73A0A0B4J1V6 119 aa1.96□□□□□ -2.1
LINC00393-201ENST00000443621 TRAV10A0A0B4J240 114 aa1.96□□□□□ -2.1
LINC00393-201ENST00000443621 TRAV8-6A0A0B4J262 113 aa1.96□□□□□ -2.1
LINC00393-201ENST00000443621 A0A0B4J2C4 111 aa1.96□□□□□ -2.1
LINC00393-201ENST00000443621 A0A0J9YXV3 536 aa1.96□□□□□ -2.1
LINC00393-201ENST00000443621 LOC100131303A0A0U1RQF7 123 aa1.96□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms