RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 PPP1R2P9O14990 202 aa13.6□□□□□ -0.23
CDKN3-204ENST00000442975 XCL1P47992 114 aa13.6□□□□□ -0.23
CDKN3-204ENST00000442975 CNBPP62633 177 aaKnown RBP13.6□□□□□ -0.23
CDKN3-204ENST00000442975 A0A1B0GXF2 115 aa13.59□□□□□ -0.23
CDKN3-204ENST00000442975 PLA2G1BP04054 148 aaKnown RBP13.59□□□□□ -0.23
CDKN3-204ENST00000442975 HIGD2BQ4VC39 106 aa13.59□□□□□ -0.23
CDKN3-204ENST00000442975 CFAP161Q6P656 301 aa13.59□□□□□ -0.23
CDKN3-204ENST00000442975 C15orf56Q8N910 161 aa13.59□□□□□ -0.23
CDKN3-204ENST00000442975 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.58□□□□□ -0.24
CDKN3-204ENST00000442975 D6R8Y8 96 aa13.58□□□□□ -0.24
CDKN3-204ENST00000442975 MRPL52Q86TS9 123 aaKnown RBP13.58□□□□□ -0.24
CDKN3-204ENST00000442975 LINC00862A6NCI5 91 aa13.57□□□□□ -0.24
CDKN3-204ENST00000442975 PNRC1Q12796 327 aaPredicted RBP13.57□□□□□ -0.24
CDKN3-204ENST00000442975 LINC00959A0A1B0GUT2 108 aa13.56□□□□□ -0.24
CDKN3-204ENST00000442975 CCL25O15444 150 aa13.56□□□□□ -0.24
CDKN3-204ENST00000442975 FOXI1Q12951 378 aa13.56□□□□□ -0.24
CDKN3-204ENST00000442975 CLLU1Q5K131 121 aa13.56□□□□□ -0.24
CDKN3-204ENST00000442975 C20orf78Q9BR46 151 aa13.56□□□□□ -0.24
CDKN3-204ENST00000442975 CDC42SE2Q9NRR3 84 aa13.56□□□□□ -0.24
CDKN3-204ENST00000442975 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.56□□□□□ -0.24
CDKN3-204ENST00000442975 IGHV3-64A0A075B6Q5 118 aa13.55□□□□□ -0.24
CDKN3-204ENST00000442975 TNFRSF6BO95407 300 aa13.55□□□□□ -0.24
CDKN3-204ENST00000442975 ATP5L2Q7Z4Y8 100 aa13.55□□□□□ -0.24
CDKN3-204ENST00000442975 ZNF664Q8N3J9 261 aa13.55□□□□□ -0.24
CDKN3-204ENST00000442975 MT-ND4LP03901 98 aa13.54□□□□□ -0.24
CDKN3-204ENST00000442975 SLPIP03973 132 aa13.54□□□□□ -0.24
CDKN3-204ENST00000442975 SMAGPQ0VAQ4 97 aa13.54□□□□□ -0.24
CDKN3-204ENST00000442975 SS18Q15532 418 aa13.54□□□□□ -0.24
CDKN3-204ENST00000442975 RNASE13Q5GAN3 156 aaKnown RBP13.54□□□□□ -0.24
CDKN3-204ENST00000442975 SMIM2Q9BVW6 85 aa13.54□□□□□ -0.24
CDKN3-204ENST00000442975 TRBV24-1A0A075B6N3 115 aa13.53□□□□□ -0.24
CDKN3-204ENST00000442975 PANO1I0J062 215 aa13.53□□□□□ -0.24
CDKN3-204ENST00000442975 NPYP01303 97 aa13.53□□□□□ -0.24
CDKN3-204ENST00000442975 SDIM1Q6ZPB5 146 aa13.53□□□□□ -0.24
CDKN3-204ENST00000442975 UBE2D4Q9Y2X8 147 aa13.53□□□□□ -0.24
CDKN3-204ENST00000442975 GVQW2A0A096LPI5 108 aaPredicted RBP13.52□□□□□ -0.25
CDKN3-204ENST00000442975 Q6ZUT4 128 aa13.52□□□□□ -0.25
CDKN3-204ENST00000442975 TMEM18Q96B42 140 aa13.52□□□□□ -0.25
CDKN3-204ENST00000442975 FLG2Q5D862 2391 aaPredicted RBP13.51□□□□□ -0.25
CDKN3-204ENST00000442975 PPBPP02775 128 aa13.51□□□□□ -0.25
CDKN3-204ENST00000442975 RPL32P62910 135 aaKnown RBP13.51□□□□□ -0.25
CDKN3-204ENST00000442975 ORMDL3Q8N138 153 aa13.51□□□□□ -0.25
CDKN3-204ENST00000442975 ANAPC16Q96DE5 110 aa13.51□□□□□ -0.25
CDKN3-204ENST00000442975 HERC1Q15751 4861 aa13.5□□□□□ -0.25
CDKN3-204ENST00000442975 TCAPO15273 167 aa13.5□□□□□ -0.25
CDKN3-204ENST00000442975 TRAV13-1A0A0B4J241 112 aa13.49□□□□□ -0.25
CDKN3-204ENST00000442975 CHTF8P0CG12 524 aa13.49□□□□□ -0.25
CDKN3-204ENST00000442975 CD164L2Q6UWJ8 174 aa13.49□□□□□ -0.25
CDKN3-204ENST00000442975 PRELID3AQ96N28 172 aa13.49□□□□□ -0.25
CDKN3-204ENST00000442975 CSDC2Q9Y534 153 aaKnown RBP13.49□□□□□ -0.25
CDKN3-204ENST00000442975 DMBT1Q9UGM3 2413 aaPredicted RBP13.49□□□□□ -0.25
CDKN3-204ENST00000442975 IGHV1-58A0A0C4DH39 117 aa13.48□□□□□ -0.25
CDKN3-204ENST00000442975 PHOX2AO14813 284 aa13.48□□□□□ -0.25
CDKN3-204ENST00000442975 RPL39P62891 51 aaKnown RBP13.48□□□□□ -0.25
CDKN3-204ENST00000442975 TMEM136Q6ZRR5 245 aa13.48□□□□□ -0.25
CDKN3-204ENST00000442975 DPH3Q96FX2 82 aa13.48□□□□□ -0.25
CDKN3-204ENST00000442975 IFITM2Q01629 132 aa13.47□□□□□ -0.25
CDKN3-204ENST00000442975 C1orf196B1AJZ1 125 aa13.46□□□□□ -0.25
CDKN3-204ENST00000442975 LINC00526Q96FQ7 95 aa13.46□□□□□ -0.25
CDKN3-204ENST00000442975 TIMM21Q9BVV7 248 aa13.46□□□□□ -0.25
CDKN3-204ENST00000442975 ADCYAP1P18509 176 aa13.45□□□□□ -0.26
CDKN3-204ENST00000442975 MALP21145 153 aa13.45□□□□□ -0.26
CDKN3-204ENST00000442975 RPL37AP61513 92 aaKnown RBP13.45□□□□□ -0.26
CDKN3-204ENST00000442975 COX6A2Q02221 97 aa13.45□□□□□ -0.26
CDKN3-204ENST00000442975 COX7A2LO14548 114 aa13.44□□□□□ -0.26
CDKN3-204ENST00000442975 RAB5AP20339 215 aa13.44□□□□□ -0.26
CDKN3-204ENST00000442975 CIRBPQ14011 172 aaKnown RBP13.44□□□□□ -0.26
CDKN3-204ENST00000442975 UQCC3Q6UW78 93 aa13.44□□□□□ -0.26
CDKN3-204ENST00000442975 SPACA4Q8TDM5 124 aa13.44□□□□□ -0.26
CDKN3-204ENST00000442975 SPANXA1Q9NS26 97 aa13.44□□□□□ -0.26
CDKN3-204ENST00000442975 IGKV2-24A0A0C4DH68 120 aa13.43□□□□□ -0.26
CDKN3-204ENST00000442975 LOC389332A0A1B0GUA5 103 aa13.43□□□□□ -0.26
CDKN3-204ENST00000442975 ZNF561-AS1K7EIQ3 104 aa13.43□□□□□ -0.26
CDKN3-204ENST00000442975 TMEM218A2RU14 115 aa13.42□□□□□ -0.26
CDKN3-204ENST00000442975 KRTAP10-4P60372 401 aaPredicted RBP13.42□□□□□ -0.26
CDKN3-204ENST00000442975 CARD19Q96LW7 228 aa13.42□□□□□ -0.26
CDKN3-204ENST00000442975 MAP1LC3AQ9H492 121 aa13.42□□□□□ -0.26
CDKN3-204ENST00000442975 PRSS3P2Q8NHM4 247 aa13.41□□□□□ -0.26
CDKN3-204ENST00000442975 OPRPNQ99935 248 aaPredicted RBP13.41□□□□□ -0.26
CDKN3-204ENST00000442975 LAMTOR2Q9Y2Q5 125 aa13.41□□□□□ -0.26
CDKN3-204ENST00000442975 A0A087WYN8 130 aa13.4□□□□□ -0.26
CDKN3-204ENST00000442975 J3QL48 77 aa13.4□□□□□ -0.26
CDKN3-204ENST00000442975 MAJINQ3KP22 176 aa13.4□□□□□ -0.26
CDKN3-204ENST00000442975 C5orf38Q86SI9 138 aa13.4□□□□□ -0.26
CDKN3-204ENST00000442975 COMMD7Q86VX2 200 aa13.4□□□□□ -0.26
CDKN3-204ENST00000442975 IFITM10A6NMD0 228 aa13.39□□□□□ -0.27
CDKN3-204ENST00000442975 IFI27P40305 119 aaPredicted RBP13.38□□□□□ -0.27
CDKN3-204ENST00000442975 SYCNQ0VAF6 134 aa13.38□□□□□ -0.27
CDKN3-204ENST00000442975 CTDSP1Q9GZU7 261 aa13.38□□□□□ -0.27
CDKN3-204ENST00000442975 IGLV4-69A0A075B6H9 119 aa13.37□□□□□ -0.27
CDKN3-204ENST00000442975 MRPS36P82909 103 aaKnown RBP13.37□□□□□ -0.27
CDKN3-204ENST00000442975 IMMP2LQ96T52 175 aa13.37□□□□□ -0.27
CDKN3-204ENST00000442975 A0A096LNI7 61 aa13.36□□□□□ -0.27
CDKN3-204ENST00000442975 FAM104AQ969W3 186 aa13.36□□□□□ -0.27
CDKN3-204ENST00000442975 PKIGQ9Y2B9 76 aa13.36□□□□□ -0.27
CDKN3-204ENST00000442975 APOMO95445 188 aa13.35□□□□□ -0.27
CDKN3-204ENST00000442975 SPAG11BQ08648 103 aa13.35□□□□□ -0.27
CDKN3-204ENST00000442975 PLAC8Q9NZF1 115 aa13.35□□□□□ -0.27
CDKN3-204ENST00000442975 STPG4Q8N801 248 aa13.34□□□□□ -0.27
CDKN3-204ENST00000442975 Q8N8P6 123 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms