RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 IGLV4-60A0A075B6I1 120 aa8.6□□□□□ -1.03
SCLT1-202ENST00000439369 IGLV4-3A0A075B6K6 122 aa8.6□□□□□ -1.03
SCLT1-202ENST00000439369 LEPROTL1O95214 131 aa8.6□□□□□ -1.03
SCLT1-202ENST00000439369 Q6ZN92 141 aa8.6□□□□□ -1.03
SCLT1-202ENST00000439369 Q8N976 141 aa8.6□□□□□ -1.03
SCLT1-202ENST00000439369 PRR34Q9NV39 138 aa8.6□□□□□ -1.03
SCLT1-202ENST00000439369 DYNC2H1Q8NCM8 4307 aaKnown RBP8.59□□□□□ -1.03
SCLT1-202ENST00000439369 C5orf52A6NGY3 159 aa8.59□□□□□ -1.03
SCLT1-202ENST00000439369 IBA57-AS1B1ANH7 110 aa8.59□□□□□ -1.03
SCLT1-202ENST00000439369 CCL25O15444 150 aa8.59□□□□□ -1.03
SCLT1-202ENST00000439369 LY6G6CO95867 125 aa8.59□□□□□ -1.03
SCLT1-202ENST00000439369 IGHV3-30P01768 117 aa8.59□□□□□ -1.03
SCLT1-202ENST00000439369 IGHV3-33P01772 117 aa8.59□□□□□ -1.03
SCLT1-202ENST00000439369 ANGP03950 147 aaKnown RBP8.59□□□□□ -1.03
SCLT1-202ENST00000439369 IGHV3-30-3P0DP02 117 aa8.59□□□□□ -1.03
SCLT1-202ENST00000439369 IGHV3-30-5P0DP03 117 aa8.59□□□□□ -1.03
SCLT1-202ENST00000439369 NBDYA0A0U1RRE5 68 aa8.58□□□□□ -1.04
SCLT1-202ENST00000439369 Q6ZUT4 128 aa8.58□□□□□ -1.04
SCLT1-202ENST00000439369 HIST3H2BBQ8N257 126 aa8.58□□□□□ -1.04
SCLT1-202ENST00000439369 FAM104AQ969W3 186 aa8.58□□□□□ -1.04
SCLT1-202ENST00000439369 CSMD3Q7Z407 3707 aa8.57□□□□□ -1.04
SCLT1-202ENST00000439369 TRAV8-3A0A0A6YYJ7 113 aa8.57□□□□□ -1.04
SCLT1-202ENST00000439369 LCE6AA0A183 80 aa8.57□□□□□ -1.04
SCLT1-202ENST00000439369 S100A2P29034 98 aa8.57□□□□□ -1.04
SCLT1-202ENST00000439369 REG3AQ06141 175 aa8.57□□□□□ -1.04
SCLT1-202ENST00000439369 MIAQ16674 131 aa8.57□□□□□ -1.04
SCLT1-202ENST00000439369 TEX43Q6ZNM6 134 aa8.57□□□□□ -1.04
SCLT1-202ENST00000439369 Q8N3U1 123 aa8.57□□□□□ -1.04
SCLT1-202ENST00000439369 IFI27L1Q96BM0 104 aa8.57□□□□□ -1.04
SCLT1-202ENST00000439369 AMELXQ99217 191 aa8.57□□□□□ -1.04
SCLT1-202ENST00000439369 C2orf88Q9BSF0 95 aa8.57□□□□□ -1.04
SCLT1-202ENST00000439369 VCX2Q9H322 139 aa8.57□□□□□ -1.04
SCLT1-202ENST00000439369 KLK12Q9UKR0 248 aa8.57□□□□□ -1.04
SCLT1-202ENST00000439369 TRAV8-4A0A0B4J246 113 aa8.56□□□□□ -1.04
SCLT1-202ENST00000439369 CRPP02741 224 aa8.56□□□□□ -1.04
SCLT1-202ENST00000439369 SNRPEP62304 92 aaKnown RBP8.56□□□□□ -1.04
SCLT1-202ENST00000439369 LINC00269Q8N2A0 174 aa8.56□□□□□ -1.04
SCLT1-202ENST00000439369 BAALCQ8WXS3 180 aa8.56□□□□□ -1.04
SCLT1-202ENST00000439369 TMA7Q9Y2S6 64 aaKnown RBP8.56□□□□□ -1.04
SCLT1-202ENST00000439369 TENM2Q9NT68 2774 aa8.56□□□□□ -1.04
SCLT1-202ENST00000439369 TRAV12-1A0A0B4J245 112 aa8.55□□□□□ -1.04
SCLT1-202ENST00000439369 PMVKQ15126 192 aa8.55□□□□□ -1.04
SCLT1-202ENST00000439369 ENHOQ6UWT2 76 aa8.55□□□□□ -1.04
SCLT1-202ENST00000439369 Q6ZR54 194 aa8.55□□□□□ -1.04
SCLT1-202ENST00000439369 LINC00173Q6ZV60 143 aa8.55□□□□□ -1.04
SCLT1-202ENST00000439369 RMI2Q96E14 147 aa8.55□□□□□ -1.04
SCLT1-202ENST00000439369 OPRPNQ99935 248 aaPredicted RBP8.55□□□□□ -1.04
SCLT1-202ENST00000439369 MAP1LC3CQ9BXW4 147 aa8.55□□□□□ -1.04
SCLT1-202ENST00000439369 IFITM10A6NMD0 228 aa8.54□□□□□ -1.04
SCLT1-202ENST00000439369 FABP4P15090 132 aa8.54□□□□□ -1.04
SCLT1-202ENST00000439369 SEC11AP67812 179 aa8.54□□□□□ -1.04
SCLT1-202ENST00000439369 FAM19A3Q7Z5A8 133 aa8.54□□□□□ -1.04
SCLT1-202ENST00000439369 NFE4Q86UQ8 179 aa8.54□□□□□ -1.04
SCLT1-202ENST00000439369 UBE2WQ96B02 151 aa8.54□□□□□ -1.04
SCLT1-202ENST00000439369 HIST1H2BLQ99880 126 aa8.54□□□□□ -1.04
SCLT1-202ENST00000439369 CST9LQ9H4G1 147 aa8.54□□□□□ -1.04
SCLT1-202ENST00000439369 COX11Q9Y6N1 276 aa8.54□□□□□ -1.04
SCLT1-202ENST00000439369 LINC00959A0A1B0GUT2 108 aa8.53□□□□□ -1.04
SCLT1-202ENST00000439369 PRSS1P07477 247 aa8.53□□□□□ -1.04
SCLT1-202ENST00000439369 SS18Q15532 418 aa8.53□□□□□ -1.04
SCLT1-202ENST00000439369 SPATA12Q7Z6I5 190 aa8.53□□□□□ -1.04
SCLT1-202ENST00000439369 KRTAP1-5Q9BYS1 174 aa8.53□□□□□ -1.04
SCLT1-202ENST00000439369 STARD9Q9P2P6 4700 aa8.53□□□□□ -1.04
SCLT1-202ENST00000439369 UBE2D1P51668 147 aa8.52□□□□□ -1.05
SCLT1-202ENST00000439369 RNASE13Q5GAN3 156 aaKnown RBP8.52□□□□□ -1.05
SCLT1-202ENST00000439369 TM2D2Q9BX73 214 aa8.52□□□□□ -1.05
SCLT1-202ENST00000439369 PRSS29PA6NIE9 313 aa8.51□□□□□ -1.05
SCLT1-202ENST00000439369 SYS1-DBNDD2H3BUS1 97 aa8.51□□□□□ -1.05
SCLT1-202ENST00000439369 PET117Q6UWS5 81 aa8.51□□□□□ -1.05
SCLT1-202ENST00000439369 C1orf43Q9BWL3 253 aa8.51□□□□□ -1.05
SCLT1-202ENST00000439369 TRAV13-1A0A0B4J241 112 aa8.5□□□□□ -1.05
SCLT1-202ENST00000439369 AKR1D1P51857 326 aa8.5□□□□□ -1.05
SCLT1-202ENST00000439369 CLPSL2Q6UWE3 100 aa8.5□□□□□ -1.05
SCLT1-202ENST00000439369 IGKV3OR2-268A0A0C4DH90 116 aa8.49□□□□□ -1.05
SCLT1-202ENST00000439369 TINCRA0A1B0GVN0 87 aa8.49□□□□□ -1.05
SCLT1-202ENST00000439369 F8VRH5 84 aa8.49□□□□□ -1.05
SCLT1-202ENST00000439369 C3orf79P0CE67 100 aa8.49□□□□□ -1.05
SCLT1-202ENST00000439369 IGLC3P0DOY3 106 aa8.49□□□□□ -1.05
SCLT1-202ENST00000439369 HERVK_113P63121 156 aa8.49□□□□□ -1.05
SCLT1-202ENST00000439369 ODF1Q14990 250 aa8.49□□□□□ -1.05
SCLT1-202ENST00000439369 LINC00242Q5T6M2 205 aa8.49□□□□□ -1.05
SCLT1-202ENST00000439369 CD164L2Q6UWJ8 174 aa8.49□□□□□ -1.05
SCLT1-202ENST00000439369 C6orf223Q8N319 242 aa8.49□□□□□ -1.05
SCLT1-202ENST00000439369 CHCHD10Q8WYQ3 142 aaPredicted RBP8.49□□□□□ -1.05
SCLT1-202ENST00000439369 Q9HAA7 133 aa8.49□□□□□ -1.05
SCLT1-202ENST00000439369 CHTOPQ9Y3Y2 248 aaKnown RBP8.49□□□□□ -1.05
SCLT1-202ENST00000439369 C20orf202A1L168 122 aa8.48□□□□□ -1.05
SCLT1-202ENST00000439369 KRTDAPP60985 99 aa8.48□□□□□ -1.05
SCLT1-202ENST00000439369 ZC2HC1BQ5TFG8 222 aa8.48□□□□□ -1.05
SCLT1-202ENST00000439369 KRTAP26-1Q6PEX3 210 aa8.48□□□□□ -1.05
SCLT1-202ENST00000439369 IGKV2D-24A0A075B6R9 120 aa8.47□□□□□ -1.05
SCLT1-202ENST00000439369 IGLV5-45A0A087WSX0 123 aa8.47□□□□□ -1.05
SCLT1-202ENST00000439369 M0R2N4 97 aa8.47□□□□□ -1.05
SCLT1-202ENST00000439369 PLNP26678 52 aa8.47□□□□□ -1.05
SCLT1-202ENST00000439369 C1orf134Q5TEV5 83 aa8.47□□□□□ -1.05
SCLT1-202ENST00000439369 LINC01545Q5VT33 79 aa8.47□□□□□ -1.05
SCLT1-202ENST00000439369 LINC01561Q8N1V8 128 aa8.47□□□□□ -1.05
SCLT1-202ENST00000439369 GEMIN7Q9H840 131 aaKnown RBP8.47□□□□□ -1.05
SCLT1-202ENST00000439369 IGLV4-69A0A075B6H9 119 aa8.46□□□□□ -1.06
SCLT1-202ENST00000439369 IGLV10-54A0A075B6I4 117 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 83 ms