RNA–Protein interactions for RNA: ENST00000438213.5

CTSD-205, Transcript of cathepsin D, humanhuman

TSL 2

Gene CTSD, Length 946 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-205ENST00000438213 PRSS47A8MTI9 375 aa10.78□□□□□ -0.68
CTSD-205ENST00000438213 CDK2AP2O75956 126 aa10.78□□□□□ -0.68
CTSD-205ENST00000438213 SNAPINO95295 136 aa10.78□□□□□ -0.68
CTSD-205ENST00000438213 COX19Q49B96 90 aa10.78□□□□□ -0.68
CTSD-205ENST00000438213 KRTAP26-1Q6PEX3 210 aa10.78□□□□□ -0.68
CTSD-205ENST00000438213 SVBPQ8N300 66 aa10.78□□□□□ -0.68
CTSD-205ENST00000438213 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.77□□□□□ -0.69
CTSD-205ENST00000438213 ZNF664Q8N3J9 261 aa10.77□□□□□ -0.69
CTSD-205ENST00000438213 MAP1LC3AQ9H492 121 aa10.77□□□□□ -0.69
CTSD-205ENST00000438213 CDC42SE2Q9NRR3 84 aa10.77□□□□□ -0.69
CTSD-205ENST00000438213 CSDC2Q9Y534 153 aaKnown RBP10.77□□□□□ -0.69
CTSD-205ENST00000438213 USP17L23D6RBM5 183 aa10.76□□□□□ -0.69
CTSD-205ENST00000438213 TIMM21Q9BVV7 248 aa10.76□□□□□ -0.69
CTSD-205ENST00000438213 GNB1LQ9BYB4 327 aa10.76□□□□□ -0.69
CTSD-205ENST00000438213 LOC389332A0A1B0GUA5 103 aa10.75□□□□□ -0.69
CTSD-205ENST00000438213 UBE2D4Q9Y2X8 147 aa10.75□□□□□ -0.69
CTSD-205ENST00000438213 GAGE12HA6NDE8 117 aa10.74□□□□□ -0.69
CTSD-205ENST00000438213 KRTAP10-1P60331 282 aa10.74□□□□□ -0.69
CTSD-205ENST00000438213 SS18Q15532 418 aa10.74□□□□□ -0.69
CTSD-205ENST00000438213 CFAP161Q6P656 301 aa10.74□□□□□ -0.69
CTSD-205ENST00000438213 Q8N8P6 123 aa10.74□□□□□ -0.69
CTSD-205ENST00000438213 CHCHD10Q8WYQ3 142 aaPredicted RBP10.74□□□□□ -0.69
CTSD-205ENST00000438213 LINC00959A0A1B0GUT2 108 aa10.73□□□□□ -0.69
CTSD-205ENST00000438213 CCL25O15444 150 aa10.73□□□□□ -0.69
CTSD-205ENST00000438213 DYNC1H1Q14204 4646 aaKnown RBP10.73□□□□□ -0.69
CTSD-205ENST00000438213 MT-ND6P03923 174 aa10.72□□□□□ -0.69
CTSD-205ENST00000438213 KIAA1644Q3SXP7 199 aa10.72□□□□□ -0.69
CTSD-205ENST00000438213 NXT2Q9NPJ8 142 aaKnown RBP10.72□□□□□ -0.69
CTSD-205ENST00000438213 SPANXA1Q9NS26 97 aa10.72□□□□□ -0.69
CTSD-205ENST00000438213 K7EMI3 77 aa10.71□□□□□ -0.69
CTSD-205ENST00000438213 PRSS1P07477 247 aa10.71□□□□□ -0.69
CTSD-205ENST00000438213 RPL39P62891 51 aaKnown RBP10.71□□□□□ -0.69
CTSD-205ENST00000438213 SLC7A5P1Q8MH63 180 aa10.71□□□□□ -0.69
CTSD-205ENST00000438213 C1orf196B1AJZ1 125 aa10.7□□□□□ -0.7
CTSD-205ENST00000438213 ORMDL2Q53FV1 153 aa10.7□□□□□ -0.7
CTSD-205ENST00000438213 hDV102S1A0JD36 115 aa10.69□□□□□ -0.7
CTSD-205ENST00000438213 G0S2P27469 103 aa10.69□□□□□ -0.7
CTSD-205ENST00000438213 XCL1P47992 114 aa10.69□□□□□ -0.7
CTSD-205ENST00000438213 FABP9Q0Z7S8 132 aa10.69□□□□□ -0.7
CTSD-205ENST00000438213 AP5S1Q9NUS5 200 aa10.69□□□□□ -0.7
CTSD-205ENST00000438213 IFI27P40305 119 aaPredicted RBP10.68□□□□□ -0.7
CTSD-205ENST00000438213 MRPS36P82909 103 aaKnown RBP10.68□□□□□ -0.7
CTSD-205ENST00000438213 CD164L2Q6UWJ8 174 aa10.68□□□□□ -0.7
CTSD-205ENST00000438213 MRPL18Q9H0U6 180 aaKnown RBP10.68□□□□□ -0.7
CTSD-205ENST00000438213 PYGO1Q9Y3Y4 419 aa10.68□□□□□ -0.7
CTSD-205ENST00000438213 TGIF2-C20orf24A0A0A6YYL0 155 aa10.67□□□□□ -0.7
CTSD-205ENST00000438213 TRAV13-1A0A0B4J241 112 aa10.67□□□□□ -0.7
CTSD-205ENST00000438213 FOXI1Q12951 378 aa10.67□□□□□ -0.7
CTSD-205ENST00000438213 RNASE13Q5GAN3 156 aaKnown RBP10.67□□□□□ -0.7
CTSD-205ENST00000438213 Q6ZUT4 128 aa10.67□□□□□ -0.7
CTSD-205ENST00000438213 PRSS3P2Q8NHM4 247 aa10.67□□□□□ -0.7
CTSD-205ENST00000438213 ALKBH7Q9BT30 221 aaPredicted RBP10.67□□□□□ -0.7
CTSD-205ENST00000438213 CYSLTR1Q9Y271 337 aa10.67□□□□□ -0.7
CTSD-205ENST00000438213 LRP1BQ9NZR2 4599 aa10.67□□□□□ -0.7
CTSD-205ENST00000438213 TRAPPC1Q9Y5R8 145 aa10.66□□□□□ -0.7
CTSD-205ENST00000438213 KIAA1109Q2LD37 5005 aa10.66□□□□□ -0.7
CTSD-205ENST00000438213 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.65□□□□□ -0.7
CTSD-205ENST00000438213 XGP55808 180 aa10.65□□□□□ -0.7
CTSD-205ENST00000438213 C2orf66Q6UXQ4 117 aa10.65□□□□□ -0.7
CTSD-205ENST00000438213 LINC01620Q4KN68 170 aa10.64□□□□□ -0.71
CTSD-205ENST00000438213 C9orf163Q8N9P6 203 aa10.64□□□□□ -0.71
CTSD-205ENST00000438213 OPRPNQ99935 248 aaPredicted RBP10.64□□□□□ -0.71
CTSD-205ENST00000438213 DNAH5Q8TE73 4624 aa10.64□□□□□ -0.71
CTSD-205ENST00000438213 IGHV1-58A0A0C4DH39 117 aa10.63□□□□□ -0.71
CTSD-205ENST00000438213 CNBPP62633 177 aaKnown RBP10.63□□□□□ -0.71
CTSD-205ENST00000438213 C15orf56Q8N910 161 aa10.63□□□□□ -0.71
CTSD-205ENST00000438213 FAM104AQ969W3 186 aa10.63□□□□□ -0.71
CTSD-205ENST00000438213 TMEM141Q96I45 108 aa10.63□□□□□ -0.71
CTSD-205ENST00000438213 IFITM10A6NMD0 228 aa10.62□□□□□ -0.71
CTSD-205ENST00000438213 COX7A2LO14548 114 aa10.62□□□□□ -0.71
CTSD-205ENST00000438213 NPSP0C0P6 89 aa10.62□□□□□ -0.71
CTSD-205ENST00000438213 MALP21145 153 aa10.62□□□□□ -0.71
CTSD-205ENST00000438213 SMCO4Q9NRQ5 59 aa10.62□□□□□ -0.71
CTSD-205ENST00000438213 FAM30AQ9NZY2 134 aa10.62□□□□□ -0.71
CTSD-205ENST00000438213 LINC01549A6NIU2 74 aa10.61□□□□□ -0.71
CTSD-205ENST00000438213 HIGD2BQ4VC39 106 aa10.61□□□□□ -0.71
CTSD-205ENST00000438213 Q6ZN92 141 aa10.61□□□□□ -0.71
CTSD-205ENST00000438213 FA2HQ7L5A8 372 aa10.61□□□□□ -0.71
CTSD-205ENST00000438213 Q8N1X5 172 aa10.61□□□□□ -0.71
CTSD-205ENST00000438213 VCX2Q9H322 139 aa10.61□□□□□ -0.71
CTSD-205ENST00000438213 IGLV4-3A0A075B6K6 122 aa10.6□□□□□ -0.71
CTSD-205ENST00000438213 GVQW2A0A096LPI5 108 aaPredicted RBP10.6□□□□□ -0.71
CTSD-205ENST00000438213 PAPPA-AS1Q5QFB9 102 aa10.6□□□□□ -0.71
CTSD-205ENST00000438213 TEX43Q6ZNM6 134 aa10.6□□□□□ -0.71
CTSD-205ENST00000438213 Q6ZSA8 131 aa10.6□□□□□ -0.71
CTSD-205ENST00000438213 LINC01546A6NGU7 62 aa10.59□□□□□ -0.71
CTSD-205ENST00000438213 ZNF561-AS1K7EIQ3 104 aa10.59□□□□□ -0.71
CTSD-205ENST00000438213 APOMO95445 188 aa10.59□□□□□ -0.71
CTSD-205ENST00000438213 TOMM6Q96B49 74 aa10.59□□□□□ -0.71
CTSD-205ENST00000438213 C2orf88Q9BSF0 95 aa10.59□□□□□ -0.71
CTSD-205ENST00000438213 HERC2O95714 4834 aa10.59□□□□□ -0.71
CTSD-205ENST00000438213 IGHV3-64A0A075B6Q5 118 aa10.58□□□□□ -0.72
CTSD-205ENST00000438213 IGIPA6NJ69 53 aa10.58□□□□□ -0.72
CTSD-205ENST00000438213 SLPIP03973 132 aa10.58□□□□□ -0.72
CTSD-205ENST00000438213 C5orf38Q86SI9 138 aa10.58□□□□□ -0.72
CTSD-205ENST00000438213 SDIM1Q6ZPB5 146 aa10.57□□□□□ -0.72
CTSD-205ENST00000438213 ERASQ7Z444 233 aa10.57□□□□□ -0.72
CTSD-205ENST00000438213 YPEL4Q96NS1 127 aa10.57□□□□□ -0.72
CTSD-205ENST00000438213 SCGB3A1Q96QR1 104 aa10.57□□□□□ -0.72
CTSD-205ENST00000438213 TIMM17AQ99595 171 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms