RNA–Protein interactions for RNA: ENST00000438120.5

PTPRF-209, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRF, Length 6,377 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-209ENST00000438120 LOC100131303A0A0U1RQF7 123 aa12.75□□□□□ -0.37
PTPRF-209ENST00000438120 TEX49A0A1B0GTD5 131 aa12.75□□□□□ -0.37
PTPRF-209ENST00000438120 ALPK3Q96L96 1907 aa12.75□□□□□ -0.37
PTPRF-209ENST00000438120 BPY2O14599 106 aa12.75□□□□□ -0.37
PTPRF-209ENST00000438120 MAPKAPK5-AS1Q8N8E1 139 aa12.75□□□□□ -0.37
PTPRF-209ENST00000438120 UPK3BQ9BT76 320 aa12.75□□□□□ -0.37
PTPRF-209ENST00000438120 RNF185Q96GF1 192 aa12.74□□□□□ -0.37
PTPRF-209ENST00000438120 CDSNQ15517 529 aa12.74□□□□□ -0.37
PTPRF-209ENST00000438120 SHISA2Q6UWI4 295 aa12.74□□□□□ -0.37
PTPRF-209ENST00000438120 LINC01006Q8NI28 216 aa12.74□□□□□ -0.37
PTPRF-209ENST00000438120 G3V4G9 280 aa12.73□□□□□ -0.37
PTPRF-209ENST00000438120 MIFP14174 115 aa12.73□□□□□ -0.37
PTPRF-209ENST00000438120 SDIM1Q6ZPB5 146 aa12.73□□□□□ -0.37
PTPRF-209ENST00000438120 PRR9Q5T870 116 aa12.72□□□□□ -0.37
PTPRF-209ENST00000438120 LINC00308Q8TCZ7 52 aa12.72□□□□□ -0.37
PTPRF-209ENST00000438120 KIAA1549Q9HCM3 1950 aa12.72□□□□□ -0.37
PTPRF-209ENST00000438120 IGKV2-28A0A075B6P5 120 aa12.72□□□□□ -0.37
PTPRF-209ENST00000438120 IGKV2D-28P01615 120 aa12.72□□□□□ -0.37
PTPRF-209ENST00000438120 FSTL3O95633 263 aa12.72□□□□□ -0.37
PTPRF-209ENST00000438120 PSMG3-AS1Q96PY0 264 aa12.72□□□□□ -0.37
PTPRF-209ENST00000438120 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.71□□□□□ -0.37
PTPRF-209ENST00000438120 TRBV6-4A0A1B0GX49 114 aa12.71□□□□□ -0.38
PTPRF-209ENST00000438120 H7C423 109 aa12.7□□□□□ -0.38
PTPRF-209ENST00000438120 IGLV2-11P01706 119 aa12.7□□□□□ -0.38
PTPRF-209ENST00000438120 NUP210LQ5VU65 1888 aa12.7□□□□□ -0.38
PTPRF-209ENST00000438120 PDE6GP18545 87 aa12.69□□□□□ -0.38
PTPRF-209ENST00000438120 PPDPFQ9H3Y8 114 aa12.69□□□□□ -0.38
PTPRF-209ENST00000438120 SMR3AQ99954 134 aa12.69□□□□□ -0.38
PTPRF-209ENST00000438120 SYCNQ0VAF6 134 aa12.69□□□□□ -0.38
PTPRF-209ENST00000438120 C11orf21Q9P2W6 132 aa12.69□□□□□ -0.38
PTPRF-209ENST00000438120 RBX1P62877 108 aa12.68□□□□□ -0.38
PTPRF-209ENST00000438120 MYO18BQ8IUG5 2567 aa12.68□□□□□ -0.38
PTPRF-209ENST00000438120 RNASE3P12724 160 aaKnown RBP12.68□□□□□ -0.38
PTPRF-209ENST00000438120 IBA57-AS1B1ANH7 110 aa12.68□□□□□ -0.38
PTPRF-209ENST00000438120 C6orf99Q4VX62 202 aa12.68□□□□□ -0.38
PTPRF-209ENST00000438120 CLUHP3Q96NS8 147 aa12.68□□□□□ -0.38
PTPRF-209ENST00000438120 CCDC168Q8NDH2 2452 aa12.68□□□□□ -0.38
PTPRF-209ENST00000438120 PLXNB1O43157 2135 aa12.67□□□□□ -0.38
PTPRF-209ENST00000438120 TRIAP1O43715 76 aa12.67□□□□□ -0.38
PTPRF-209ENST00000438120 LINC00643Q86TS7 51 aa12.67□□□□□ -0.38
PTPRF-209ENST00000438120 Q8N6K4 173 aa12.67□□□□□ -0.38
PTPRF-209ENST00000438120 C1orf158Q8N1D5 194 aa12.67□□□□□ -0.38
PTPRF-209ENST00000438120 ABCA2Q9BZC7 2435 aa12.66□□□□□ -0.38
PTPRF-209ENST00000438120 EDN2P20800 178 aa12.66□□□□□ -0.38
PTPRF-209ENST00000438120 KPRPQ5T749 579 aaPredicted RBP12.66□□□□□ -0.38
PTPRF-209ENST00000438120 ENHOQ6UWT2 76 aa12.66□□□□□ -0.38
PTPRF-209ENST00000438120 WFDC10BQ8IUB3 73 aa12.66□□□□□ -0.38
PTPRF-209ENST00000438120 COL4A4P53420 1690 aaPredicted RBP12.66□□□□□ -0.38
PTPRF-209ENST00000438120 TSHBP01222 138 aa12.66□□□□□ -0.38
PTPRF-209ENST00000438120 TRAV10A0A0B4J240 114 aa12.65□□□□□ -0.38
PTPRF-209ENST00000438120 GAS8-AS1O95177 125 aa12.65□□□□□ -0.38
PTPRF-209ENST00000438120 HRCT1Q6UXD1 115 aa12.65□□□□□ -0.38
PTPRF-209ENST00000438120 C3orf84H3BNL1 204 aa12.65□□□□□ -0.39
PTPRF-209ENST00000438120 AVPP01185 164 aa12.64□□□□□ -0.39
PTPRF-209ENST00000438120 MT-ATP8P03928 68 aa12.64□□□□□ -0.39
PTPRF-209ENST00000438120 OXLD1Q5BKU9 147 aa12.64□□□□□ -0.39
PTPRF-209ENST00000438120 U3KQK5 164 aa12.64□□□□□ -0.39
PTPRF-209ENST00000438120 NAV2Q8IVL1 2488 aa12.64□□□□□ -0.39
PTPRF-209ENST00000438120 J3KT08 172 aa12.64□□□□□ -0.39
PTPRF-209ENST00000438120 SEC61GP60059 68 aa12.63□□□□□ -0.39
PTPRF-209ENST00000438120 SPANXB1Q9NS25 103 aaPredicted RBP12.63□□□□□ -0.39
PTPRF-209ENST00000438120 TRBV27A0A0K0K1C4 114 aa12.63□□□□□ -0.39
PTPRF-209ENST00000438120 C20orf197Q8N268 126 aa12.63□□□□□ -0.39
PTPRF-209ENST00000438120 RPL37AP8A6NKH3 93 aa12.62□□□□□ -0.39
PTPRF-209ENST00000438120 A0A0J9YWU9 116 aa12.62□□□□□ -0.39
PTPRF-209ENST00000438120 CASC2Q6XLA1 102 aa12.62□□□□□ -0.39
PTPRF-209ENST00000438120 NRACQ8N912 160 aa12.62□□□□□ -0.39
PTPRF-209ENST00000438120 SPINK6Q6UWN8 80 aa12.62□□□□□ -0.39
PTPRF-209ENST00000438120 NANOS2P60321 138 aaKnown RBP12.62□□□□□ -0.39
PTPRF-209ENST00000438120 LY6G6CO95867 125 aa12.61□□□□□ -0.39
PTPRF-209ENST00000438120 KRTAP10-9P60411 292 aa12.61□□□□□ -0.39
PTPRF-209ENST00000438120 IGLV1-40P01703 118 aa12.61□□□□□ -0.39
PTPRF-209ENST00000438120 CCKP06307 115 aa12.61□□□□□ -0.39
PTPRF-209ENST00000438120 NCOR2Q9Y618 2525 aa12.6□□□□□ -0.39
PTPRF-209ENST00000438120 LINC00959A0A1B0GUT2 108 aa12.59□□□□□ -0.39
PTPRF-209ENST00000438120 UBE2D4Q9Y2X8 147 aa12.59□□□□□ -0.39
PTPRF-209ENST00000438120 TRBV6-5A0A0K0K1A5 114 aa12.59□□□□□ -0.39
PTPRF-209ENST00000438120 CD164L2Q6UWJ8 174 aa12.59□□□□□ -0.39
PTPRF-209ENST00000438120 C9orf85Q96MD7 179 aa12.59□□□□□ -0.39
PTPRF-209ENST00000438120 PIEZO2Q9H5I5 2752 aa12.59□□□□□ -0.39
PTPRF-209ENST00000438120 KLLNB2CW77 178 aa12.59□□□□□ -0.39
PTPRF-209ENST00000438120 USP17L23D6RBM5 183 aa12.58□□□□□ -0.4
PTPRF-209ENST00000438120 MPLKIPQ8TAP9 179 aa12.58□□□□□ -0.4
PTPRF-209ENST00000438120 KIR2DL5BQ8NHK3 375 aa12.58□□□□□ -0.4
PTPRF-209ENST00000438120 NDUFC2O95298 119 aa12.57□□□□□ -0.4
PTPRF-209ENST00000438120 PRRC2AP48634 2157 aaKnown RBP12.57□□□□□ -0.4
PTPRF-209ENST00000438120 C7orf33Q8WU49 177 aa12.57□□□□□ -0.4
PTPRF-209ENST00000438120 PYGO1Q9Y3Y4 419 aa12.57□□□□□ -0.4
PTPRF-209ENST00000438120 ARHGAP32A7KAX9 2087 aa12.57□□□□□ -0.4
PTPRF-209ENST00000438120 Q6ZQY7 126 aa12.57□□□□□ -0.4
PTPRF-209ENST00000438120 NAV3Q8IVL0 2385 aa12.56□□□□□ -0.4
PTPRF-209ENST00000438120 IGF2RP11717 2491 aa12.56□□□□□ -0.4
PTPRF-209ENST00000438120 BRK1Q8WUW1 75 aa12.56□□□□□ -0.4
PTPRF-209ENST00000438120 PLA2G2AP14555 144 aa12.56□□□□□ -0.4
PTPRF-209ENST00000438120 LELP1Q5T871 98 aa12.56□□□□□ -0.4
PTPRF-209ENST00000438120 SVIPQ8NHG7 77 aa12.56□□□□□ -0.4
PTPRF-209ENST00000438120 TRBV30A0A0K0K1B3 111 aa12.55□□□□□ -0.4
PTPRF-209ENST00000438120 NDUFV3P56181 108 aaKnown RBP12.55□□□□□ -0.4
PTPRF-209ENST00000438120 RETNQ9HD89 108 aa12.55□□□□□ -0.4
PTPRF-209ENST00000438120 IGHV4-30-4P0DP06 118 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms