RNA–Protein interactions for RNA: ENST00000438066.1

SPEN-202, Transcript of spen family transcriptional repressor, humanhuman

TSL 3

Gene SPEN, Length 1,733 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPEN-202ENST00000438066 DPH3P1Q9H4G8 78 aa4.38□□□□□ -1.71
SPEN-202ENST00000438066 NXT2Q9NPJ8 142 aaKnown RBP4.38□□□□□ -1.71
SPEN-202ENST00000438066 KIF25-AS1Q9Y6Z4 181 aa4.38□□□□□ -1.71
SPEN-202ENST00000438066 IGLV1-51P01701 117 aa4.37□□□□□ -1.71
SPEN-202ENST00000438066 HBDP02042 147 aa4.37□□□□□ -1.71
SPEN-202ENST00000438066 NDUFA11Q86Y39 141 aa4.37□□□□□ -1.71
SPEN-202ENST00000438066 CEND1Q8N111 149 aa4.37□□□□□ -1.71
SPEN-202ENST00000438066 Q8N8P6 123 aa4.37□□□□□ -1.71
SPEN-202ENST00000438066 VAMP8Q9BV40 100 aa4.37□□□□□ -1.71
SPEN-202ENST00000438066 HSPB8Q9UJY1 196 aa4.37□□□□□ -1.71
SPEN-202ENST00000438066 COTL1Q14019 142 aa4.36□□□□□ -1.71
SPEN-202ENST00000438066 CASC10Q5T4H9 136 aa4.36□□□□□ -1.71
SPEN-202ENST00000438066 LINC01545Q5VT33 79 aa4.36□□□□□ -1.71
SPEN-202ENST00000438066 C14orf178Q8N769 122 aaPredicted RBP4.36□□□□□ -1.71
SPEN-202ENST00000438066 LINC00467Q9BRT7 94 aa4.36□□□□□ -1.71
SPEN-202ENST00000438066 KRTAP4-11Q9BYQ6 195 aa4.36□□□□□ -1.71
SPEN-202ENST00000438066 KRTAP4-5Q9BYR2 181 aa4.36□□□□□ -1.71
SPEN-202ENST00000438066 MAST4O15021 2626 aa4.35□□□□□ -1.71
SPEN-202ENST00000438066 CYSRT1A8MQ03 144 aa4.35□□□□□ -1.71
SPEN-202ENST00000438066 FXYD7P58549 80 aa4.35□□□□□ -1.71
SPEN-202ENST00000438066 KRTAP10-11P60412 298 aa4.35□□□□□ -1.71
SPEN-202ENST00000438066 C20orf78Q9BR46 151 aa4.35□□□□□ -1.71
SPEN-202ENST00000438066 SMIM2Q9BVW6 85 aa4.35□□□□□ -1.71
SPEN-202ENST00000438066 NOTCH3Q9UM47 2321 aa4.35□□□□□ -1.71
SPEN-202ENST00000438066 OR11H12B2RN74 326 aa4.35□□□□□ -1.71
SPEN-202ENST00000438066 FCER1GP30273 86 aa4.35□□□□□ -1.71
SPEN-202ENST00000438066 TAL2Q16559 108 aa4.35□□□□□ -1.71
SPEN-202ENST00000438066 LCE1AQ5T7P2 110 aa4.35□□□□□ -1.71
SPEN-202ENST00000438066 ATOH7Q8N100 152 aa4.35□□□□□ -1.71
SPEN-202ENST00000438066 RPL39LQ96EH5 51 aaKnown RBP4.35□□□□□ -1.71
SPEN-202ENST00000438066 C14orf144Q96I85 54 aa4.35□□□□□ -1.71
SPEN-202ENST00000438066 C20orf202A1L168 122 aa4.34□□□□□ -1.71
SPEN-202ENST00000438066 KRTAP4-16G5E9R7 235 aaPredicted RBP4.34□□□□□ -1.71
SPEN-202ENST00000438066 K7EMI3 77 aa4.34□□□□□ -1.71
SPEN-202ENST00000438066 PPP1R17O96001 155 aa4.34□□□□□ -1.71
SPEN-202ENST00000438066 INSP01308 110 aa4.34□□□□□ -1.71
SPEN-202ENST00000438066 CRYGDP07320 174 aa4.34□□□□□ -1.71
SPEN-202ENST00000438066 MGPP08493 103 aa4.34□□□□□ -1.71
SPEN-202ENST00000438066 CTAG1AP78358 180 aa4.34□□□□□ -1.71
SPEN-202ENST00000438066 DEFA6Q01524 100 aa4.34□□□□□ -1.71
SPEN-202ENST00000438066 SPATA45Q537H7 98 aa4.34□□□□□ -1.71
SPEN-202ENST00000438066 C11orf72Q8NBR9 251 aa4.34□□□□□ -1.71
SPEN-202ENST00000438066 IFI27L1Q96BM0 104 aa4.34□□□□□ -1.71
SPEN-202ENST00000438066 A6NDN8 102 aa4.33□□□□□ -1.72
SPEN-202ENST00000438066 SMIM17P0DL12 118 aa4.33□□□□□ -1.72
SPEN-202ENST00000438066 IGLC3P0DOY3 106 aa4.33□□□□□ -1.72
SPEN-202ENST00000438066 LGALS9BQ3B8N2 356 aa4.33□□□□□ -1.72
SPEN-202ENST00000438066 LGALS9CQ6DKI2 356 aa4.33□□□□□ -1.72
SPEN-202ENST00000438066 MRAPQ8TCY5 172 aa4.33□□□□□ -1.72
SPEN-202ENST00000438066 TMEM158Q8WZ71 300 aa4.33□□□□□ -1.72
SPEN-202ENST00000438066 PTH2Q96A98 100 aa4.33□□□□□ -1.72
SPEN-202ENST00000438066 MIEN1Q9BRT3 115 aa4.33□□□□□ -1.72
SPEN-202ENST00000438066 EDA2RQ9HAV5 297 aa4.33□□□□□ -1.72
SPEN-202ENST00000438066 TRBV6-5A0A0K0K1A5 114 aa4.32□□□□□ -1.72
SPEN-202ENST00000438066 M0QY20 66 aa4.32□□□□□ -1.72
SPEN-202ENST00000438066 TCAPO15273 167 aa4.32□□□□□ -1.72
SPEN-202ENST00000438066 PRM2P04554 102 aa4.32□□□□□ -1.72
SPEN-202ENST00000438066 POLR2KP53803 58 aaKnown RBP4.32□□□□□ -1.72
SPEN-202ENST00000438066 CMC4P56277 68 aaPredicted RBP4.32□□□□□ -1.72
SPEN-202ENST00000438066 RIPPLY3P57055 190 aa4.32□□□□□ -1.72
SPEN-202ENST00000438066 MORN3Q6PF18 240 aaPredicted RBP4.32□□□□□ -1.72
SPEN-202ENST00000438066 ZNF705AQ6ZN79 300 aaPredicted RBP4.32□□□□□ -1.72
SPEN-202ENST00000438066 C1orf158Q8N1D5 194 aa4.32□□□□□ -1.72
SPEN-202ENST00000438066 C20orf203Q8NBC4 194 aa4.32□□□□□ -1.72
SPEN-202ENST00000438066 C16orf74Q96GX8 76 aa4.32□□□□□ -1.72
SPEN-202ENST00000438066 TMEM101Q96IK0 257 aa4.32□□□□□ -1.72
SPEN-202ENST00000438066 WFDC10AQ9H1F0 79 aa4.32□□□□□ -1.72
SPEN-202ENST00000438066 FAM168BA1KXE4 195 aa4.32□□□□□ -1.72
SPEN-202ENST00000438066 M0R2P5 195 aa4.32□□□□□ -1.72
SPEN-202ENST00000438066 ORMDL2Q53FV1 153 aa4.32□□□□□ -1.72
SPEN-202ENST00000438066 FAM74A4Q5TZK3 123 aa4.32□□□□□ -1.72
SPEN-202ENST00000438066 Q6ZTC4 211 aa4.32□□□□□ -1.72
SPEN-202ENST00000438066 PMCHL2Q9BQD1 86 aa4.32□□□□□ -1.72
SPEN-202ENST00000438066 ST20Q9HBF5 79 aa4.32□□□□□ -1.72
SPEN-202ENST00000438066 STAB1Q9NY15 2570 aa4.31□□□□□ -1.72
SPEN-202ENST00000438066 TRBV27A0A0K0K1C4 114 aa4.31□□□□□ -1.72
SPEN-202ENST00000438066 HTN1P15515 57 aa4.31□□□□□ -1.72
SPEN-202ENST00000438066 ZNF56Q15929 161 aa4.31□□□□□ -1.72
SPEN-202ENST00000438066 C9orf129Q5T035 196 aaKnown RBP4.31□□□□□ -1.72
SPEN-202ENST00000438066 MRPL52Q86TS9 123 aaKnown RBP4.31□□□□□ -1.72
SPEN-202ENST00000438066 TOMM6Q96B49 74 aa4.31□□□□□ -1.72
SPEN-202ENST00000438066 C18orf15Q96N68 181 aa4.31□□□□□ -1.72
SPEN-202ENST00000438066 LINC01587Q99440 93 aa4.31□□□□□ -1.72
SPEN-202ENST00000438066 UQCR10Q9UDW1 63 aa4.31□□□□□ -1.72
SPEN-202ENST00000438066 SDHAF1A6NFY7 115 aa4.3□□□□□ -1.72
SPEN-202ENST00000438066 A8MWV9 139 aa4.3□□□□□ -1.72
SPEN-202ENST00000438066 AZU1P20160 251 aa4.3□□□□□ -1.72
SPEN-202ENST00000438066 CFAP126Q5VTH2 177 aa4.3□□□□□ -1.72
SPEN-202ENST00000438066 NEGR1Q7Z3B1 354 aa4.3□□□□□ -1.72
SPEN-202ENST00000438066 PKD1L1Q8TDX9 2849 aa4.3□□□□□ -1.72
SPEN-202ENST00000438066 PFN2P35080 140 aa4.29□□□□□ -1.72
SPEN-202ENST00000438066 INSL3P51460 131 aa4.29□□□□□ -1.72
SPEN-202ENST00000438066 TMEM263Q8WUH6 116 aaKnown RBP4.29□□□□□ -1.72
SPEN-202ENST00000438066 SNHG12Q9BXW3 62 aa4.29□□□□□ -1.72
SPEN-202ENST00000438066 NBEAL2Q6ZNJ1 2754 aa4.29□□□□□ -1.72
SPEN-202ENST00000438066 TRAV12-1A0A0B4J245 112 aa4.29□□□□□ -1.72
SPEN-202ENST00000438066 PLAC8L1A1L4L8 177 aa4.29□□□□□ -1.72
SPEN-202ENST00000438066 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.29□□□□□ -1.72
SPEN-202ENST00000438066 ZFP2Q6ZN57 461 aa4.29□□□□□ -1.72
SPEN-202ENST00000438066 C2orf88Q9BSF0 95 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms