RNA–Protein interactions for RNA: ENST00000437932.5

PDLIM5-206, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5 BASIC

Gene PDLIM5, Length 5,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-206ENST00000437932 ZNF843Q8N446 348 aa8.51□□□□□ -1.05
PDLIM5-206ENST00000437932 MIR7-3HGQ8N6C7 128 aa8.51□□□□□ -1.05
PDLIM5-206ENST00000437932 CREBBPQ92793 2442 aa8.51□□□□□ -1.05
PDLIM5-206ENST00000437932 DAZ2Q13117 558 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-206ENST00000437932 DAZ4Q86SG3 579 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-206ENST00000437932 TMEM263Q8WUH6 116 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-206ENST00000437932 DAZ3Q9NR90 486 aaKnown RBP8.5□□□□□ -1.05
PDLIM5-206ENST00000437932 TMEM89A2RUT3 159 aa8.5□□□□□ -1.05
PDLIM5-206ENST00000437932 ADAMTSL4-AS1Q5T5F5 129 aa8.5□□□□□ -1.05
PDLIM5-206ENST00000437932 ODF3Q96PU9 254 aa8.5□□□□□ -1.05
PDLIM5-206ENST00000437932 SMR3AQ99954 134 aa8.5□□□□□ -1.05
PDLIM5-206ENST00000437932 LAMTOR3Q9UHA4 124 aa8.5□□□□□ -1.05
PDLIM5-206ENST00000437932 DMXL2Q8TDJ6 3036 aa8.5□□□□□ -1.05
PDLIM5-206ENST00000437932 DEFB135Q30KP9 77 aa8.5□□□□□ -1.05
PDLIM5-206ENST00000437932 SND1-IT1Q9HBX3 110 aa8.5□□□□□ -1.05
PDLIM5-206ENST00000437932 IGHV3-33P01772 117 aa8.5□□□□□ -1.05
PDLIM5-206ENST00000437932 ATP5G1P05496 136 aa8.5□□□□□ -1.05
PDLIM5-206ENST00000437932 LINC00482Q8N8I6 264 aa8.5□□□□□ -1.05
PDLIM5-206ENST00000437932 POM121L12Q8N7R1 296 aa8.49□□□□□ -1.05
PDLIM5-206ENST00000437932 WNK1Q9H4A3 2382 aa8.49□□□□□ -1.05
PDLIM5-206ENST00000437932 TRBV10-2A0A0K0K1G8 114 aa8.49□□□□□ -1.05
PDLIM5-206ENST00000437932 RNF183Q96D59 192 aa8.49□□□□□ -1.05
PDLIM5-206ENST00000437932 CHD8Q9HCK8 2581 aa8.49□□□□□ -1.05
PDLIM5-206ENST00000437932 ATMQ13315 3056 aa8.49□□□□□ -1.05
PDLIM5-206ENST00000437932 SVEP1Q4LDE5 3571 aa8.49□□□□□ -1.05
PDLIM5-206ENST00000437932 TRAV4A0A0B4J268 109 aa8.49□□□□□ -1.05
PDLIM5-206ENST00000437932 LINC01546A6NGU7 62 aa8.49□□□□□ -1.05
PDLIM5-206ENST00000437932 LINC00694P0DN24 101 aa8.49□□□□□ -1.05
PDLIM5-206ENST00000437932 TRAV26-1A0A087WT03 109 aa8.48□□□□□ -1.05
PDLIM5-206ENST00000437932 CMC4P56277 68 aaPredicted RBP8.48□□□□□ -1.05
PDLIM5-206ENST00000437932 SLPIP03973 132 aa8.48□□□□□ -1.05
PDLIM5-206ENST00000437932 A0A0B4J2C4 111 aa8.48□□□□□ -1.05
PDLIM5-206ENST00000437932 TRBV6-5A0A0K0K1A5 114 aa8.48□□□□□ -1.05
PDLIM5-206ENST00000437932 XGP55808 180 aa8.47□□□□□ -1.05
PDLIM5-206ENST00000437932 AGRNO00468 2067 aa8.47□□□□□ -1.05
PDLIM5-206ENST00000437932 CHCHD7Q9BUK0 85 aa8.47□□□□□ -1.05
PDLIM5-206ENST00000437932 KIF25-AS1Q9Y6Z4 181 aa8.47□□□□□ -1.05
PDLIM5-206ENST00000437932 ATP6V0E2Q8NHE4 81 aa8.47□□□□□ -1.05
PDLIM5-206ENST00000437932 TRAV13-2A0A0B4J235 113 aa8.46□□□□□ -1.05
PDLIM5-206ENST00000437932 IGKV3D-7A0A0C4DH55 119 aa8.46□□□□□ -1.05
PDLIM5-206ENST00000437932 LINC00315P59091 139 aa8.46□□□□□ -1.06
PDLIM5-206ENST00000437932 RNF152Q8N8N0 203 aa8.45□□□□□ -1.06
PDLIM5-206ENST00000437932 LINC00308Q8TCZ7 52 aa8.45□□□□□ -1.06
PDLIM5-206ENST00000437932 FAM19A4Q96LR4 140 aa8.45□□□□□ -1.06
PDLIM5-206ENST00000437932 UBE2D1P51668 147 aa8.45□□□□□ -1.06
PDLIM5-206ENST00000437932 LINC00526Q96FQ7 95 aa8.44□□□□□ -1.06
PDLIM5-206ENST00000437932 ZNF575Q86XF7 245 aa8.44□□□□□ -1.06
PDLIM5-206ENST00000437932 C14orf132Q9NPU4 83 aa8.44□□□□□ -1.06
PDLIM5-206ENST00000437932 HIVEP3Q5T1R4 2406 aa8.43□□□□□ -1.06
PDLIM5-206ENST00000437932 LECT2O14960 151 aa8.43□□□□□ -1.06
PDLIM5-206ENST00000437932 SPTBN4Q9H254 2564 aa8.43□□□□□ -1.06
PDLIM5-206ENST00000437932 ODF3L2Q3SX64 289 aa8.43□□□□□ -1.06
PDLIM5-206ENST00000437932 J3QKU1 62 aa8.43□□□□□ -1.06
PDLIM5-206ENST00000437932 TACC2O95359 2948 aa8.42□□□□□ -1.06
PDLIM5-206ENST00000437932 FAM236AA0A1B0GUQ0 79 aa8.42□□□□□ -1.06
PDLIM5-206ENST00000437932 FAM236BA0A1B0GV22 79 aa8.42□□□□□ -1.06
PDLIM5-206ENST00000437932 HERV-K104P63124 156 aa8.42□□□□□ -1.06
PDLIM5-206ENST00000437932 LINC00269Q8N2A0 174 aa8.42□□□□□ -1.06
PDLIM5-206ENST00000437932 BBC3Q96PG8 261 aaPredicted RBP8.42□□□□□ -1.06
PDLIM5-206ENST00000437932 PRRC2AP48634 2157 aaKnown RBP8.42□□□□□ -1.06
PDLIM5-206ENST00000437932 H7C423 109 aa8.42□□□□□ -1.06
PDLIM5-206ENST00000437932 C9orf153Q5TBE3 101 aa8.42□□□□□ -1.06
PDLIM5-206ENST00000437932 SPATA25Q9BR10 227 aa8.42□□□□□ -1.06
PDLIM5-206ENST00000437932 ZZEF1O43149 2961 aa8.41□□□□□ -1.06
PDLIM5-206ENST00000437932 MRPS36P82909 103 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-206ENST00000437932 NDUFA1O15239 70 aa8.41□□□□□ -1.06
PDLIM5-206ENST00000437932 RPL32P62910 135 aaKnown RBP8.41□□□□□ -1.06
PDLIM5-206ENST00000437932 SMCPP49901 116 aaPredicted RBP8.4□□□□□ -1.06
PDLIM5-206ENST00000437932 DEFB121Q5J5C9 76 aa8.4□□□□□ -1.06
PDLIM5-206ENST00000437932 C1orf158Q8N1D5 194 aa8.4□□□□□ -1.06
PDLIM5-206ENST00000437932 PYGO1Q9Y3Y4 419 aa8.4□□□□□ -1.07
PDLIM5-206ENST00000437932 LINC01006Q8NI28 216 aa8.4□□□□□ -1.07
PDLIM5-206ENST00000437932 MRAPQ8TCY5 172 aa8.39□□□□□ -1.07
PDLIM5-206ENST00000437932 TRBV30A0A0K0K1B3 111 aa8.39□□□□□ -1.07
PDLIM5-206ENST00000437932 ZNF561-AS1K7EIQ3 104 aa8.39□□□□□ -1.07
PDLIM5-206ENST00000437932 DPH3Q96FX2 82 aa8.39□□□□□ -1.07
PDLIM5-206ENST00000437932 SPANXDQ9BXN6 97 aa8.39□□□□□ -1.07
PDLIM5-206ENST00000437932 SPANXCQ9NY87 97 aa8.39□□□□□ -1.07
PDLIM5-206ENST00000437932 UBE2D3P61077 147 aa8.38□□□□□ -1.07
PDLIM5-206ENST00000437932 UBE2D2P62837 147 aa8.38□□□□□ -1.07
PDLIM5-206ENST00000437932 TRAV25A0A0B4J276 109 aa8.38□□□□□ -1.07
PDLIM5-206ENST00000437932 LINC00242Q5T6M2 205 aa8.38□□□□□ -1.07
PDLIM5-206ENST00000437932 FAM222AQ5U5X8 452 aa8.38□□□□□ -1.07
PDLIM5-206ENST00000437932 COX7A2LO14548 114 aa8.38□□□□□ -1.07
PDLIM5-206ENST00000437932 APOC4P55056 127 aa8.38□□□□□ -1.07
PDLIM5-206ENST00000437932 DEFB105AQ8NG35 78 aa8.38□□□□□ -1.07
PDLIM5-206ENST00000437932 OVOL2Q9BRP0 275 aa8.37□□□□□ -1.07
PDLIM5-206ENST00000437932 INAFM1C9JVW0 142 aa8.37□□□□□ -1.07
PDLIM5-206ENST00000437932 INAFM2P0DMQ5 153 aa8.37□□□□□ -1.07
PDLIM5-206ENST00000437932 FAM110AQ9BQ89 295 aa8.37□□□□□ -1.07
PDLIM5-206ENST00000437932 ORMDL1Q9P0S3 153 aa8.37□□□□□ -1.07
PDLIM5-206ENST00000437932 PTPN13Q12923 2485 aa8.37□□□□□ -1.07
PDLIM5-206ENST00000437932 IGLV4-60A0A075B6I1 120 aa8.37□□□□□ -1.07
PDLIM5-206ENST00000437932 KLK12Q9UKR0 248 aa8.37□□□□□ -1.07
PDLIM5-206ENST00000437932 SDIM1Q6ZPB5 146 aa8.37□□□□□ -1.07
PDLIM5-206ENST00000437932 PRR3P79522 188 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-206ENST00000437932 TRBV6-8A0A0A6YYG3 113 aa8.36□□□□□ -1.07
PDLIM5-206ENST00000437932 NDUFV3P56181 108 aaKnown RBP8.36□□□□□ -1.07
PDLIM5-206ENST00000437932 HAMPP81172 84 aa8.36□□□□□ -1.07
PDLIM5-206ENST00000437932 HIGD2BQ4VC39 106 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms