RNA–Protein interactions for RNA: ENST00000437196.1

EXT1-203, Transcript of exostosin glycosyltransferase 1, humanhuman

TSL 5

Gene EXT1, Length 1,446 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXT1-203ENST00000437196 HIST1H2BNQ99877 126 aa9.12□□□□□ -0.95
EXT1-203ENST00000437196 HIST1H2BMQ99879 126 aa9.12□□□□□ -0.95
EXT1-203ENST00000437196 KMT2AQ03164 3969 aa9.11□□□□□ -0.95
EXT1-203ENST00000437196 IGLV4-60A0A075B6I1 120 aa9.11□□□□□ -0.95
EXT1-203ENST00000437196 HBDP02042 147 aa9.11□□□□□ -0.95
EXT1-203ENST00000437196 MIAQ16674 131 aa9.11□□□□□ -0.95
EXT1-203ENST00000437196 URB1-AS1Q96HZ7 61 aa9.11□□□□□ -0.95
EXT1-203ENST00000437196 CDC42SE2Q9NRR3 84 aa9.11□□□□□ -0.95
EXT1-203ENST00000437196 COX11Q9Y6N1 276 aa9.11□□□□□ -0.95
EXT1-203ENST00000437196 SACSQ9NZJ4 4579 aa9.1□□□□□ -0.95
EXT1-203ENST00000437196 MRPS36P82909 103 aaKnown RBP9.1□□□□□ -0.95
EXT1-203ENST00000437196 Q6ZN92 141 aa9.1□□□□□ -0.95
EXT1-203ENST00000437196 LINC00269Q8N2A0 174 aa9.1□□□□□ -0.95
EXT1-203ENST00000437196 ZNF664Q8N3J9 261 aa9.1□□□□□ -0.95
EXT1-203ENST00000437196 Q8N3U1 123 aa9.1□□□□□ -0.95
EXT1-203ENST00000437196 UBE2WQ96B02 151 aa9.1□□□□□ -0.95
EXT1-203ENST00000437196 TIMM17AQ99595 171 aa9.1□□□□□ -0.95
EXT1-203ENST00000437196 PRR34Q9NV39 138 aa9.1□□□□□ -0.95
EXT1-203ENST00000437196 DNAH6Q9C0G6 4158 aa9.09□□□□□ -0.95
EXT1-203ENST00000437196 TRAV8-4A0A0B4J246 113 aa9.09□□□□□ -0.95
EXT1-203ENST00000437196 REG3AQ06141 175 aa9.09□□□□□ -0.95
EXT1-203ENST00000437196 C1orf134Q5TEV5 83 aa9.09□□□□□ -0.95
EXT1-203ENST00000437196 ERASQ7Z444 233 aa9.09□□□□□ -0.95
EXT1-203ENST00000437196 C6orf223Q8N319 242 aa9.09□□□□□ -0.95
EXT1-203ENST00000437196 TMEM141Q96I45 108 aa9.09□□□□□ -0.95
EXT1-203ENST00000437196 SCGB3A1Q96QR1 104 aa9.09□□□□□ -0.95
EXT1-203ENST00000437196 TM2D2Q9BX73 214 aa9.09□□□□□ -0.95
EXT1-203ENST00000437196 CCL25O15444 150 aa9.08□□□□□ -0.96
EXT1-203ENST00000437196 SERF1AO75920 110 aa9.08□□□□□ -0.96
EXT1-203ENST00000437196 KRTAP1-5Q9BYS1 174 aa9.08□□□□□ -0.96
EXT1-203ENST00000437196 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.07□□□□□ -0.96
EXT1-203ENST00000437196 TEX43Q6ZNM6 134 aa9.07□□□□□ -0.96
EXT1-203ENST00000437196 C1orf43Q9BWL3 253 aa9.07□□□□□ -0.96
EXT1-203ENST00000437196 Q9HAA7 133 aa9.07□□□□□ -0.96
EXT1-203ENST00000437196 HYDINQ4G0P3 5121 aa9.07□□□□□ -0.96
EXT1-203ENST00000437196 IGIPA6NJ69 53 aa9.06□□□□□ -0.96
EXT1-203ENST00000437196 ATP5LO75964 103 aa9.06□□□□□ -0.96
EXT1-203ENST00000437196 ENHOQ6UWT2 76 aa9.06□□□□□ -0.96
EXT1-203ENST00000437196 C2orf88Q9BSF0 95 aa9.06□□□□□ -0.96
EXT1-203ENST00000437196 VCX2Q9H322 139 aa9.06□□□□□ -0.96
EXT1-203ENST00000437196 IGLV4-3A0A075B6K6 122 aa9.05□□□□□ -0.96
EXT1-203ENST00000437196 SS18Q15532 418 aa9.05□□□□□ -0.96
EXT1-203ENST00000437196 COA6Q5JTJ3 125 aaKnown RBP9.05□□□□□ -0.96
EXT1-203ENST00000437196 CLPSL2Q6UWE3 100 aa9.05□□□□□ -0.96
EXT1-203ENST00000437196 Q6ZUT4 128 aa9.05□□□□□ -0.96
EXT1-203ENST00000437196 A0A096LNJ9 63 aa9.05□□□□□ -0.96
EXT1-203ENST00000437196 IGKV3OR2-268A0A0C4DH90 116 aa9.05□□□□□ -0.96
EXT1-203ENST00000437196 PSCAO43653 123 aa9.05□□□□□ -0.96
EXT1-203ENST00000437196 NDUFA6P56556 154 aa9.05□□□□□ -0.96
EXT1-203ENST00000437196 PMCHL1Q16048 86 aa9.05□□□□□ -0.96
EXT1-203ENST00000437196 RYR2Q92736 4967 aa9.04□□□□□ -0.96
EXT1-203ENST00000437196 IGKV2D-24A0A075B6R9 120 aa9.04□□□□□ -0.96
EXT1-203ENST00000437196 IFITM10A6NMD0 228 aa9.04□□□□□ -0.96
EXT1-203ENST00000437196 S100A6P06703 90 aa9.04□□□□□ -0.96
EXT1-203ENST00000437196 PDZD11Q5EBL8 140 aa9.04□□□□□ -0.96
EXT1-203ENST00000437196 LINC00959A0A1B0GUT2 108 aa9.03□□□□□ -0.96
EXT1-203ENST00000437196 LEPROTL1O95214 131 aa9.03□□□□□ -0.96
EXT1-203ENST00000437196 LINC00310P59036 64 aa9.03□□□□□ -0.96
EXT1-203ENST00000437196 FAM19A2Q8N3H0 131 aa9.03□□□□□ -0.96
EXT1-203ENST00000437196 AMELXQ99217 191 aa9.03□□□□□ -0.96
EXT1-203ENST00000437196 OPRPNQ99935 248 aaPredicted RBP9.03□□□□□ -0.96
EXT1-203ENST00000437196 HSPB8Q9UJY1 196 aa9.03□□□□□ -0.96
EXT1-203ENST00000437196 TRAV13-1A0A0B4J241 112 aa9.02□□□□□ -0.97
EXT1-203ENST00000437196 SEC11AP67812 179 aa9.02□□□□□ -0.97
EXT1-203ENST00000437196 RNASE13Q5GAN3 156 aaKnown RBP9.02□□□□□ -0.97
EXT1-203ENST00000437196 PACRGQ96M98 296 aaPredicted RBP9.02□□□□□ -0.97
EXT1-203ENST00000437196 PMVKQ15126 192 aa9.01□□□□□ -0.97
EXT1-203ENST00000437196 LINC00336Q6ZUF6 198 aa9.01□□□□□ -0.97
EXT1-203ENST00000437196 FAM104AQ969W3 186 aa9.01□□□□□ -0.97
EXT1-203ENST00000437196 IFI27L1Q96BM0 104 aa9.01□□□□□ -0.97
EXT1-203ENST00000437196 IGLV10-54A0A075B6I4 117 aa9□□□□□ -0.97
EXT1-203ENST00000437196 NUPR1O60356 82 aa9□□□□□ -0.97
EXT1-203ENST00000437196 CHCHD10Q8WYQ3 142 aaPredicted RBP9□□□□□ -0.97
EXT1-203ENST00000437196 PRSS1P07477 247 aa8.99□□□□□ -0.97
EXT1-203ENST00000437196 CD164L2Q6UWJ8 174 aa8.99□□□□□ -0.97
EXT1-203ENST00000437196 Q6ZRN7 208 aaPredicted RBP8.99□□□□□ -0.97
EXT1-203ENST00000437196 BAALCQ8WXS3 180 aa8.99□□□□□ -0.97
EXT1-203ENST00000437196 EREGO14944 169 aa8.98□□□□□ -0.97
EXT1-203ENST00000437196 XCL1P47992 114 aa8.98□□□□□ -0.97
EXT1-203ENST00000437196 UBE2D1P51668 147 aa8.98□□□□□ -0.97
EXT1-203ENST00000437196 CST9LQ9H4G1 147 aa8.98□□□□□ -0.97
EXT1-203ENST00000437196 GAGE12HA6NDE8 117 aa8.97□□□□□ -0.97
EXT1-203ENST00000437196 RTL8CO15255 209 aa8.97□□□□□ -0.97
EXT1-203ENST00000437196 FABP4P15090 132 aa8.97□□□□□ -0.97
EXT1-203ENST00000437196 HERVK_113P63121 156 aa8.97□□□□□ -0.97
EXT1-203ENST00000437196 LINC00173Q6ZV60 143 aa8.97□□□□□ -0.97
EXT1-203ENST00000437196 TRAV12-1A0A0B4J245 112 aa8.97□□□□□ -0.97
EXT1-203ENST00000437196 PRSS29PA6NIE9 313 aa8.97□□□□□ -0.97
EXT1-203ENST00000437196 S100A2P29034 98 aa8.97□□□□□ -0.97
EXT1-203ENST00000437196 CFAP161Q6P656 301 aa8.97□□□□□ -0.97
EXT1-203ENST00000437196 FAM19A3Q7Z5A8 133 aa8.97□□□□□ -0.97
EXT1-203ENST00000437196 MAP1LC3CQ9BXW4 147 aa8.97□□□□□ -0.97
EXT1-203ENST00000437196 GEMIN7Q9H840 131 aaKnown RBP8.97□□□□□ -0.97
EXT1-203ENST00000437196 C14orf177Q52M58 125 aa8.96□□□□□ -0.98
EXT1-203ENST00000437196 LINC00242Q5T6M2 205 aa8.96□□□□□ -0.98
EXT1-203ENST00000437196 KRTAP26-1Q6PEX3 210 aa8.96□□□□□ -0.98
EXT1-203ENST00000437196 DNAH2Q9P225 4427 aa8.96□□□□□ -0.98
EXT1-203ENST00000437196 RYR3Q15413 4870 aa8.95□□□□□ -0.98
EXT1-203ENST00000437196 TINCRA0A1B0GVN0 87 aa8.95□□□□□ -0.98
EXT1-203ENST00000437196 COX7A2LO14548 114 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms