RNA–Protein interactions for RNA: ENST00000436978.5

PTPN13-204, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 5 BASIC

Gene PTPN13, Length 8,573 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-204ENST00000436978 IGKV4-1P06312 121 aa11.78□□□□□ -0.52
PTPN13-204ENST00000436978 MBD6Q96DN6 1003 aa11.78□□□□□ -0.52
PTPN13-204ENST00000436978 TCL1BO95988 128 aa11.77□□□□□ -0.52
PTPN13-204ENST00000436978 NDUFA7O95182 113 aa11.77□□□□□ -0.52
PTPN13-204ENST00000436978 COX17Q14061 63 aa11.77□□□□□ -0.52
PTPN13-204ENST00000436978 LINC01006Q8NI28 216 aa11.77□□□□□ -0.53
PTPN13-204ENST00000436978 COL27A1Q8IZC6 1860 aaPredicted RBP11.77□□□□□ -0.53
PTPN13-204ENST00000436978 LELP1Q5T871 98 aa11.77□□□□□ -0.53
PTPN13-204ENST00000436978 ATP5EP2Q5VTU8 51 aa11.77□□□□□ -0.53
PTPN13-204ENST00000436978 LINC00482Q8N8I6 264 aa11.76□□□□□ -0.53
PTPN13-204ENST00000436978 TRBV27A0A0K0K1C4 114 aa11.76□□□□□ -0.53
PTPN13-204ENST00000436978 IGKV2D-26A0A0A0MRZ7 120 aa11.76□□□□□ -0.53
PTPN13-204ENST00000436978 PIK3CD-AS1Q5SR53 167 aa11.76□□□□□ -0.53
PTPN13-204ENST00000436978 TTTY13Q9BZ97 58 aa11.76□□□□□ -0.53
PTPN13-204ENST00000436978 TIMM17BO60830 172 aa11.76□□□□□ -0.53
PTPN13-204ENST00000436978 TRBV6-5A0A0K0K1A5 114 aa11.76□□□□□ -0.53
PTPN13-204ENST00000436978 LINC00474Q9P2X8 69 aa11.76□□□□□ -0.53
PTPN13-204ENST00000436978 CD164L2Q6UWJ8 174 aa11.75□□□□□ -0.53
PTPN13-204ENST00000436978 CDKN2A-AS1Q9UH64 79 aa11.75□□□□□ -0.53
PTPN13-204ENST00000436978 NDUFC2O95298 119 aa11.75□□□□□ -0.53
PTPN13-204ENST00000436978 LINC00643Q86TS7 51 aa11.75□□□□□ -0.53
PTPN13-204ENST00000436978 FRMD6-AS1P0C7T7 363 aa11.75□□□□□ -0.53
PTPN13-204ENST00000436978 SYCNQ0VAF6 134 aa11.75□□□□□ -0.53
PTPN13-204ENST00000436978 KPRPQ5T749 579 aaPredicted RBP11.75□□□□□ -0.53
PTPN13-204ENST00000436978 CRIP1P50238 77 aa11.74□□□□□ -0.53
PTPN13-204ENST00000436978 RNF185Q96GF1 192 aa11.74□□□□□ -0.53
PTPN13-204ENST00000436978 TRAV23DV6A0A075B6W5 121 aa11.74□□□□□ -0.53
PTPN13-204ENST00000436978 ZNF22P17026 224 aaPredicted RBP11.74□□□□□ -0.53
PTPN13-204ENST00000436978 FAM19A5Q7Z5A7 132 aaPredicted RBP11.74□□□□□ -0.53
PTPN13-204ENST00000436978 LINC00308Q8TCZ7 52 aa11.74□□□□□ -0.53
PTPN13-204ENST00000436978 PCSK5Q92824 1860 aa11.73□□□□□ -0.53
PTPN13-204ENST00000436978 KLLNB2CW77 178 aa11.73□□□□□ -0.53
PTPN13-204ENST00000436978 MUC7Q8TAX7 377 aa11.73□□□□□ -0.53
PTPN13-204ENST00000436978 DHRS4-AS1Q9P1J3 65 aa11.73□□□□□ -0.53
PTPN13-204ENST00000436978 MRPS36P82909 103 aaKnown RBP11.73□□□□□ -0.53
PTPN13-204ENST00000436978 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.73□□□□□ -0.53
PTPN13-204ENST00000436978 G3V4G9 280 aa11.73□□□□□ -0.53
PTPN13-204ENST00000436978 IGLV2-11P01706 119 aa11.72□□□□□ -0.53
PTPN13-204ENST00000436978 B5MCH6 92 aa11.72□□□□□ -0.53
PTPN13-204ENST00000436978 UBE2D1P51668 147 aa11.72□□□□□ -0.53
PTPN13-204ENST00000436978 C10orf99Q6UWK7 81 aa11.72□□□□□ -0.53
PTPN13-204ENST00000436978 BBC3Q96PG8 261 aaPredicted RBP11.72□□□□□ -0.53
PTPN13-204ENST00000436978 J3KT08 172 aa11.72□□□□□ -0.53
PTPN13-204ENST00000436978 MRGPRG-AS1Q2M3A8 158 aa11.71□□□□□ -0.53
PTPN13-204ENST00000436978 DCANP1Q8TF63 244 aa11.71□□□□□ -0.53
PTPN13-204ENST00000436978 LOC107984640A0A0U1RRK4 108 aa11.71□□□□□ -0.54
PTPN13-204ENST00000436978 CASC2Q6XLA1 102 aa11.7□□□□□ -0.54
PTPN13-204ENST00000436978 IGLV4-69A0A075B6H9 119 aa11.7□□□□□ -0.54
PTPN13-204ENST00000436978 LRCOL1A6NCL2 159 aa11.7□□□□□ -0.54
PTPN13-204ENST00000436978 PRRC2AP48634 2157 aaKnown RBP11.7□□□□□ -0.54
PTPN13-204ENST00000436978 C9orf85Q96MD7 179 aa11.7□□□□□ -0.54
PTPN13-204ENST00000436978 TSHBP01222 138 aa11.7□□□□□ -0.54
PTPN13-204ENST00000436978 SS18L2Q9UHA2 77 aa11.69□□□□□ -0.54
PTPN13-204ENST00000436978 NUPR2A6NF83 97 aa11.69□□□□□ -0.54
PTPN13-204ENST00000436978 NRACQ8N912 160 aa11.69□□□□□ -0.54
PTPN13-204ENST00000436978 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.68□□□□□ -0.54
PTPN13-204ENST00000436978 TRBV30A0A0K0K1B3 111 aa11.68□□□□□ -0.54
PTPN13-204ENST00000436978 RNASE3P12724 160 aaKnown RBP11.68□□□□□ -0.54
PTPN13-204ENST00000436978 M0R378 163 aa11.68□□□□□ -0.54
PTPN13-204ENST00000436978 ATRXP46100 2492 aa11.68□□□□□ -0.54
PTPN13-204ENST00000436978 RBX1P62877 108 aa11.67□□□□□ -0.54
PTPN13-204ENST00000436978 HIVEP3Q5T1R4 2406 aa11.67□□□□□ -0.54
PTPN13-204ENST00000436978 UBE2D4Q9Y2X8 147 aa11.67□□□□□ -0.54
PTPN13-204ENST00000436978 C18orf65Q6ZTR6 163 aa11.66□□□□□ -0.54
PTPN13-204ENST00000436978 Q8N976 141 aa11.66□□□□□ -0.54
PTPN13-204ENST00000436978 CLUHP3Q96NS8 147 aa11.66□□□□□ -0.54
PTPN13-204ENST00000436978 USP17L23D6RBM5 183 aa11.66□□□□□ -0.54
PTPN13-204ENST00000436978 PROK1P58294 105 aa11.65□□□□□ -0.54
PTPN13-204ENST00000436978 EP400Q96L91 3159 aa11.65□□□□□ -0.54
PTPN13-204ENST00000436978 A0A0J9YWU9 116 aa11.65□□□□□ -0.54
PTPN13-204ENST00000436978 TEX49A0A1B0GTD5 131 aa11.64□□□□□ -0.55
PTPN13-204ENST00000436978 C10orf142B7Z368 130 aa11.64□□□□□ -0.55
PTPN13-204ENST00000436978 WDR87Q6ZQQ6 2873 aa11.63□□□□□ -0.55
PTPN13-204ENST00000436978 XAGE1AQ9HD64 81 aa11.63□□□□□ -0.55
PTPN13-204ENST00000436978 TRIAP1O43715 76 aa11.63□□□□□ -0.55
PTPN13-204ENST00000436978 LINC00959A0A1B0GUT2 108 aa11.63□□□□□ -0.55
PTPN13-204ENST00000436978 PRB2P02812 416 aaPredicted RBP11.63□□□□□ -0.55
PTPN13-204ENST00000436978 CNFNQ9BYD5 112 aa11.62□□□□□ -0.55
PTPN13-204ENST00000436978 WFDC10AQ9H1F0 79 aa11.62□□□□□ -0.55
PTPN13-204ENST00000436978 Q8IZM0 81 aa11.61□□□□□ -0.55
PTPN13-204ENST00000436978 C16orf95Q9H693 158 aa11.61□□□□□ -0.55
PTPN13-204ENST00000436978 TP73-AS1Q9UF72 201 aa11.61□□□□□ -0.55
PTPN13-204ENST00000436978 LY6G6CO95867 125 aa11.61□□□□□ -0.55
PTPN13-204ENST00000436978 CRIP2P52943 208 aaPredicted RBP11.61□□□□□ -0.55
PTPN13-204ENST00000436978 ZNF580Q9UK33 172 aa11.61□□□□□ -0.55
PTPN13-204ENST00000436978 IGLV2-18A0A075B6J9 118 aa11.61□□□□□ -0.55
PTPN13-204ENST00000436978 IGHV4-30-4P0DP06 118 aa11.61□□□□□ -0.55
PTPN13-204ENST00000436978 NANOS2P60321 138 aaKnown RBP11.6□□□□□ -0.55
PTPN13-204ENST00000436978 PRR9Q5T870 116 aa11.6□□□□□ -0.55
PTPN13-204ENST00000436978 PIEZO2Q9H5I5 2752 aa11.6□□□□□ -0.55
PTPN13-204ENST00000436978 IGKV2-28A0A075B6P5 120 aa11.6□□□□□ -0.55
PTPN13-204ENST00000436978 IGKV2D-28P01615 120 aa11.6□□□□□ -0.55
PTPN13-204ENST00000436978 UBE2D3P61077 147 aa11.6□□□□□ -0.55
PTPN13-204ENST00000436978 UBE2D2P62837 147 aa11.6□□□□□ -0.55
PTPN13-204ENST00000436978 BRI3O95415 125 aa11.59□□□□□ -0.55
PTPN13-204ENST00000436978 C6orf99Q4VX62 202 aa11.59□□□□□ -0.55
PTPN13-204ENST00000436978 Q6ZS46 218 aa11.59□□□□□ -0.55
PTPN13-204ENST00000436978 CCKP06307 115 aa11.59□□□□□ -0.55
PTPN13-204ENST00000436978 SDIM1Q6ZPB5 146 aa11.58□□□□□ -0.55
PTPN13-204ENST00000436978 PTH2Q96A98 100 aa11.58□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms