RNA–Protein interactions for RNA: ENST00000436638.5

ECHDC1-208, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 3

Gene ECHDC1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-208ENST00000436638 VGLL1Q99990 258 aa4.47□□□□□ -1.69
ECHDC1-208ENST00000436638 EIF5A2Q9GZV4 153 aaKnown RBP4.47□□□□□ -1.69
ECHDC1-208ENST00000436638 ZNF492Q9P255 531 aa4.47□□□□□ -1.69
ECHDC1-208ENST00000436638 LENEPQ9Y5L5 61 aa4.47□□□□□ -1.69
ECHDC1-208ENST00000436638 TENM1Q9UKZ4 2725 aa4.46□□□□□ -1.69
ECHDC1-208ENST00000436638 TRAV12-2A0A075B6T6 113 aa4.46□□□□□ -1.7
ECHDC1-208ENST00000436638 SMIM26A0A096LP01 95 aa4.46□□□□□ -1.7
ECHDC1-208ENST00000436638 TRBV7-6A0A0J9YX20 115 aa4.46□□□□□ -1.7
ECHDC1-208ENST00000436638 A8MTW9 85 aa4.46□□□□□ -1.7
ECHDC1-208ENST00000436638 A8MWV9 139 aa4.46□□□□□ -1.7
ECHDC1-208ENST00000436638 H3BUT2 72 aa4.46□□□□□ -1.7
ECHDC1-208ENST00000436638 CENPWQ5EE01 88 aa4.46□□□□□ -1.7
ECHDC1-208ENST00000436638 TMEM75Q8N9X5 138 aa4.46□□□□□ -1.7
ECHDC1-208ENST00000436638 Q8TAT8 98 aa4.46□□□□□ -1.7
ECHDC1-208ENST00000436638 C18orf32Q8TCD1 76 aa4.46□□□□□ -1.7
ECHDC1-208ENST00000436638 C18orf15Q96N68 181 aa4.46□□□□□ -1.7
ECHDC1-208ENST00000436638 C20orf78Q9BR46 151 aa4.46□□□□□ -1.7
ECHDC1-208ENST00000436638 TM2D3Q9BRN9 247 aa4.46□□□□□ -1.7
ECHDC1-208ENST00000436638 PYGO2Q9BRQ0 406 aa4.46□□□□□ -1.7
ECHDC1-208ENST00000436638 Q9HAA7 133 aa4.46□□□□□ -1.7
ECHDC1-208ENST00000436638 ANK2Q01484 3957 aa4.46□□□□□ -1.7
ECHDC1-208ENST00000436638 TRAV8-1A0A0A6YYK1 113 aa4.45□□□□□ -1.7
ECHDC1-208ENST00000436638 GRIFINA4D1Z8 144 aa4.45□□□□□ -1.7
ECHDC1-208ENST00000436638 CRISP2P16562 243 aa4.45□□□□□ -1.7
ECHDC1-208ENST00000436638 RNASE4P34096 147 aaKnown RBP4.45□□□□□ -1.7
ECHDC1-208ENST00000436638 RIGQ13278 110 aa4.45□□□□□ -1.7
ECHDC1-208ENST00000436638 TMEM256Q8N2U0 113 aa4.45□□□□□ -1.7
ECHDC1-208ENST00000436638 ZC2HC1AQ96GY0 325 aa4.45□□□□□ -1.7
ECHDC1-208ENST00000436638 KCNS1Q96KK3 526 aa4.45□□□□□ -1.7
ECHDC1-208ENST00000436638 OVOL2Q9BRP0 275 aa4.45□□□□□ -1.7
ECHDC1-208ENST00000436638 U3KQK5 164 aa4.45□□□□□ -1.7
ECHDC1-208ENST00000436638 TRAV12-3A0A0B4J271 114 aa4.44□□□□□ -1.7
ECHDC1-208ENST00000436638 TRAV21A0A0B4J279 112 aa4.44□□□□□ -1.7
ECHDC1-208ENST00000436638 TRBV6-1A0A0K0K1D8 114 aa4.44□□□□□ -1.7
ECHDC1-208ENST00000436638 EPM2AB3EWF7 344 aa4.44□□□□□ -1.7
ECHDC1-208ENST00000436638 SYS1-DBNDD2H3BUS1 97 aa4.44□□□□□ -1.7
ECHDC1-208ENST00000436638 NDUFS5O43920 106 aa4.44□□□□□ -1.7
ECHDC1-208ENST00000436638 GIG44P09565 113 aaPredicted RBP4.44□□□□□ -1.7
ECHDC1-208ENST00000436638 MIFP14174 115 aa4.44□□□□□ -1.7
ECHDC1-208ENST00000436638 HTN1P15515 57 aa4.44□□□□□ -1.7
ECHDC1-208ENST00000436638 PAPPA-AS1Q5QFB9 102 aa4.44□□□□□ -1.7
ECHDC1-208ENST00000436638 Q86TA4 180 aa4.44□□□□□ -1.7
ECHDC1-208ENST00000436638 BAGE2Q86Y30 109 aa4.44□□□□□ -1.7
ECHDC1-208ENST00000436638 ZFAND2AQ8N6M9 145 aa4.44□□□□□ -1.7
ECHDC1-208ENST00000436638 C11orf52Q96A22 123 aa4.44□□□□□ -1.7
ECHDC1-208ENST00000436638 FAM19A4Q96LR4 140 aa4.44□□□□□ -1.7
ECHDC1-208ENST00000436638 LINC00479Q96M42 142 aa4.44□□□□□ -1.7
ECHDC1-208ENST00000436638 SERP1Q9Y6X1 66 aa4.44□□□□□ -1.7
ECHDC1-208ENST00000436638 ZNF727A8MUV8 499 aa4.43□□□□□ -1.7
ECHDC1-208ENST00000436638 KLLNB2CW77 178 aa4.43□□□□□ -1.7
ECHDC1-208ENST00000436638 MGST1P10620 155 aaKnown RBP4.43□□□□□ -1.7
ECHDC1-208ENST00000436638 CXCL5P42830 114 aa4.43□□□□□ -1.7
ECHDC1-208ENST00000436638 CACNG7P62955 275 aa4.43□□□□□ -1.7
ECHDC1-208ENST00000436638 ETDBQ3ZM63 59 aa4.43□□□□□ -1.7
ECHDC1-208ENST00000436638 FAM222AQ5U5X8 452 aa4.43□□□□□ -1.7
ECHDC1-208ENST00000436638 Q6ZVQ6 151 aa4.43□□□□□ -1.7
ECHDC1-208ENST00000436638 KTN1-AS1Q86SY8 53 aa4.43□□□□□ -1.7
ECHDC1-208ENST00000436638 CSNK1G2-AS1Q8NCQ2 148 aa4.43□□□□□ -1.7
ECHDC1-208ENST00000436638 PHLDA1Q8WV24 401 aaPredicted RBP4.43□□□□□ -1.7
ECHDC1-208ENST00000436638 AGRNO00468 2067 aa4.42□□□□□ -1.7
ECHDC1-208ENST00000436638 IGHV1OR15-1A0A075B7D0 117 aa4.42□□□□□ -1.7
ECHDC1-208ENST00000436638 IGHV4-28A0A0C4DH34 117 aa4.42□□□□□ -1.7
ECHDC1-208ENST00000436638 IGHV1-58A0A0C4DH39 117 aa4.42□□□□□ -1.7
ECHDC1-208ENST00000436638 SNURFLB1AK76 121 aa4.42□□□□□ -1.7
ECHDC1-208ENST00000436638 C9JQL5 133 aa4.42□□□□□ -1.7
ECHDC1-208ENST00000436638 LTAP01374 205 aa4.42□□□□□ -1.7
ECHDC1-208ENST00000436638 IGLV2-11P01706 119 aa4.42□□□□□ -1.7
ECHDC1-208ENST00000436638 SRP19P09132 144 aaKnown RBP4.42□□□□□ -1.7
ECHDC1-208ENST00000436638 COX7CP15954 63 aa4.42□□□□□ -1.7
ECHDC1-208ENST00000436638 PSMB2P49721 201 aa4.42□□□□□ -1.7
ECHDC1-208ENST00000436638 LINC01545Q5VT33 79 aa4.42□□□□□ -1.7
ECHDC1-208ENST00000436638 C16orf74Q96GX8 76 aa4.42□□□□□ -1.7
ECHDC1-208ENST00000436638 TRRAPQ9Y4A5 3859 aa4.42□□□□□ -1.7
ECHDC1-208ENST00000436638 A0A087WZ39 114 aa4.41□□□□□ -1.7
ECHDC1-208ENST00000436638 A0A0J9YWU9 116 aa4.41□□□□□ -1.7
ECHDC1-208ENST00000436638 DEFB4AO15263 64 aa4.41□□□□□ -1.7
ECHDC1-208ENST00000436638 ZNF324O75467 553 aaPredicted RBP4.41□□□□□ -1.7
ECHDC1-208ENST00000436638 RBMY1A1P0DJD3 496 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-208ENST00000436638 RBMY1CP0DJD4 496 aa4.41□□□□□ -1.7
ECHDC1-208ENST00000436638 S100A4P26447 101 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-208ENST00000436638 KRTDAPP60985 99 aa4.41□□□□□ -1.7
ECHDC1-208ENST00000436638 NPC2P61916 151 aa4.41□□□□□ -1.7
ECHDC1-208ENST00000436638 RBMY1FQ15415 496 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-208ENST00000436638 PRR9Q5T870 116 aa4.41□□□□□ -1.7
ECHDC1-208ENST00000436638 Q8N976 141 aa4.41□□□□□ -1.7
ECHDC1-208ENST00000436638 TMEM263Q8WUH6 116 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-208ENST00000436638 SMIM7Q9BQ49 75 aa4.41□□□□□ -1.7
ECHDC1-208ENST00000436638 LINC00467Q9BRT7 94 aa4.41□□□□□ -1.7
ECHDC1-208ENST00000436638 C11orf68Q9H3H3 251 aaKnown RBP4.41□□□□□ -1.7
ECHDC1-208ENST00000436638 SDF2L1Q9HCN8 221 aa4.41□□□□□ -1.7
ECHDC1-208ENST00000436638 MGAM2Q2M2H8 2515 aa4.4□□□□□ -1.7
ECHDC1-208ENST00000436638 TRBV7-7A0A0K0K1E9 115 aa4.4□□□□□ -1.71
ECHDC1-208ENST00000436638 A8MWL6 223 aa4.4□□□□□ -1.71
ECHDC1-208ENST00000436638 C9JCJ5 164 aa4.4□□□□□ -1.71
ECHDC1-208ENST00000436638 H3BT86 120 aa4.4□□□□□ -1.71
ECHDC1-208ENST00000436638 UBE2L6O14933 153 aa4.4□□□□□ -1.71
ECHDC1-208ENST00000436638 SH2D1AO60880 128 aa4.4□□□□□ -1.71
ECHDC1-208ENST00000436638 SPART-AS1P0CW21 52 aa4.4□□□□□ -1.71
ECHDC1-208ENST00000436638 ZNF80P51504 273 aaPredicted RBP4.4□□□□□ -1.71
ECHDC1-208ENST00000436638 WFDC2Q14508 124 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms