RNA–Protein interactions for RNA: ENST00000430669.6

PTCH1-208, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,232 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-208ENST00000430669 TRBV6-8A0A0A6YYG3 113 aa8.53□□□□□ -1.04
PTCH1-208ENST00000430669 SPANXCQ9NY87 97 aa8.53□□□□□ -1.04
PTCH1-208ENST00000430669 Q6ZS46 218 aa8.53□□□□□ -1.04
PTCH1-208ENST00000430669 TAX1BP3O14907 124 aa8.53□□□□□ -1.04
PTCH1-208ENST00000430669 BAALC-AS2P0C853 105 aa8.53□□□□□ -1.04
PTCH1-208ENST00000430669 GAGE12HA6NDE8 117 aa8.52□□□□□ -1.05
PTCH1-208ENST00000430669 C10orf99Q6UWK7 81 aa8.52□□□□□ -1.05
PTCH1-208ENST00000430669 TEN1Q86WV5 123 aa8.52□□□□□ -1.05
PTCH1-208ENST00000430669 PTH2Q96A98 100 aa8.52□□□□□ -1.05
PTCH1-208ENST00000430669 AVPP01185 164 aa8.52□□□□□ -1.05
PTCH1-208ENST00000430669 NDUFS5O43920 106 aa8.51□□□□□ -1.05
PTCH1-208ENST00000430669 P0DMU3 169 aa8.51□□□□□ -1.05
PTCH1-208ENST00000430669 FAM231AP0DMU4 169 aa8.51□□□□□ -1.05
PTCH1-208ENST00000430669 FAM231CP0DMU5 169 aa8.51□□□□□ -1.05
PTCH1-208ENST00000430669 FAM222AQ5U5X8 452 aa8.51□□□□□ -1.05
PTCH1-208ENST00000430669 RPL18AQ02543 176 aaKnown RBP8.51□□□□□ -1.05
PTCH1-208ENST00000430669 SPAG11BQ08648 103 aa8.51□□□□□ -1.05
PTCH1-208ENST00000430669 PRR9Q5T870 116 aa8.51□□□□□ -1.05
PTCH1-208ENST00000430669 OPRPNQ99935 248 aaPredicted RBP8.51□□□□□ -1.05
PTCH1-208ENST00000430669 TRAV26-1A0A087WT03 109 aa8.51□□□□□ -1.05
PTCH1-208ENST00000430669 H3BT86 120 aa8.51□□□□□ -1.05
PTCH1-208ENST00000430669 NFE4Q86UQ8 179 aa8.51□□□□□ -1.05
PTCH1-208ENST00000430669 TSHBP01222 138 aa8.51□□□□□ -1.05
PTCH1-208ENST00000430669 UBE2BP63146 152 aa8.51□□□□□ -1.05
PTCH1-208ENST00000430669 IGLV10-54A0A075B6I4 117 aa8.5□□□□□ -1.05
PTCH1-208ENST00000430669 TMEM256-PLSCR3K7ERE1 68 aa8.5□□□□□ -1.05
PTCH1-208ENST00000430669 Q8N2B8 174 aa8.5□□□□□ -1.05
PTCH1-208ENST00000430669 SPATA25Q9BR10 227 aa8.5□□□□□ -1.05
PTCH1-208ENST00000430669 Q9HAA7 133 aa8.5□□□□□ -1.05
PTCH1-208ENST00000430669 MUC7Q8TAX7 377 aa8.5□□□□□ -1.05
PTCH1-208ENST00000430669 POLR2KP53803 58 aaKnown RBP8.5□□□□□ -1.05
PTCH1-208ENST00000430669 DNAH14Q0VDD8 3507 aa8.49□□□□□ -1.05
PTCH1-208ENST00000430669 C15orf53Q8NAA6 179 aa8.49□□□□□ -1.05
PTCH1-208ENST00000430669 IBA57-AS1B1ANH7 110 aa8.49□□□□□ -1.05
PTCH1-208ENST00000430669 JMJD7-PLA2G4BH0Y9G9 81 aa8.49□□□□□ -1.05
PTCH1-208ENST00000430669 IGHV3-30P01768 117 aa8.49□□□□□ -1.05
PTCH1-208ENST00000430669 IGHV3-33P01772 117 aa8.49□□□□□ -1.05
PTCH1-208ENST00000430669 IGHV3-30-5P0DP03 117 aa8.49□□□□□ -1.05
PTCH1-208ENST00000430669 REG3AQ06141 175 aa8.49□□□□□ -1.05
PTCH1-208ENST00000430669 ZNF462Q96JM2 2506 aa8.49□□□□□ -1.05
PTCH1-208ENST00000430669 UFSP1Q6NVU6 142 aa8.49□□□□□ -1.05
PTCH1-208ENST00000430669 XIRP2A4UGR9 3374 aa8.48□□□□□ -1.05
PTCH1-208ENST00000430669 COX17Q14061 63 aa8.48□□□□□ -1.05
PTCH1-208ENST00000430669 TP73-AS1Q9UF72 201 aa8.48□□□□□ -1.05
PTCH1-208ENST00000430669 KLK12Q9UKR0 248 aa8.48□□□□□ -1.05
PTCH1-208ENST00000430669 CRYGDP07320 174 aa8.48□□□□□ -1.05
PTCH1-208ENST00000430669 PDE6GP18545 87 aa8.48□□□□□ -1.05
PTCH1-208ENST00000430669 C11orf21Q9P2W6 132 aa8.48□□□□□ -1.05
PTCH1-208ENST00000430669 C18orf65Q6ZTR6 163 aa8.47□□□□□ -1.05
PTCH1-208ENST00000430669 MIR7-3HGQ8N6C7 128 aa8.47□□□□□ -1.05
PTCH1-208ENST00000430669 SPTBN5Q9NRC6 3674 aaKnown RBP8.47□□□□□ -1.05
PTCH1-208ENST00000430669 TRBV10-2A0A0K0K1G8 114 aa8.47□□□□□ -1.05
PTCH1-208ENST00000430669 IGLV1-51P01701 117 aa8.47□□□□□ -1.05
PTCH1-208ENST00000430669 LINC00269Q8N2A0 174 aa8.47□□□□□ -1.05
PTCH1-208ENST00000430669 ZNF22P17026 224 aaPredicted RBP8.47□□□□□ -1.05
PTCH1-208ENST00000430669 ZNF292O60281 2723 aa8.46□□□□□ -1.05
PTCH1-208ENST00000430669 ETDCA0A1B0GVM5 59 aa8.46□□□□□ -1.05
PTCH1-208ENST00000430669 FUSP35637 526 aaKnown RBP eCLIP8.46□□□□□ -1.05
PTCH1-208ENST00000430669 UBE2D4Q9Y2X8 147 aa8.46□□□□□ -1.05
PTCH1-208ENST00000430669 HIST2H2BDQ6DRA6 164 aa8.45□□□□□ -1.06
PTCH1-208ENST00000430669 LINC01620Q4KN68 170 aa8.45□□□□□ -1.06
PTCH1-208ENST00000430669 DIRC1Q969H9 104 aa8.45□□□□□ -1.06
PTCH1-208ENST00000430669 DEFB4AO15263 64 aa8.45□□□□□ -1.06
PTCH1-208ENST00000430669 LINC01546A6NGU7 62 aa8.44□□□□□ -1.06
PTCH1-208ENST00000430669 LELP1Q5T871 98 aa8.44□□□□□ -1.06
PTCH1-208ENST00000430669 UBE2D1P51668 147 aa8.44□□□□□ -1.06
PTCH1-208ENST00000430669 KLK9Q2XQG4 91 aa8.44□□□□□ -1.06
PTCH1-208ENST00000430669 NTN5Q8WTR8 489 aaPredicted RBP8.44□□□□□ -1.06
PTCH1-208ENST00000430669 CHCHD10Q8WYQ3 142 aaPredicted RBP8.44□□□□□ -1.06
PTCH1-208ENST00000430669 CSDC2Q9Y534 153 aaKnown RBP8.44□□□□□ -1.06
PTCH1-208ENST00000430669 CEMP1Q6PRD7 247 aaPredicted RBP8.43□□□□□ -1.06
PTCH1-208ENST00000430669 A0A0C4DFX4 3053 aa8.43□□□□□ -1.06
PTCH1-208ENST00000430669 DEFB131BA0A096LNP1 70 aa8.43□□□□□ -1.06
PTCH1-208ENST00000430669 DAND5Q8N907 189 aa8.43□□□□□ -1.06
PTCH1-208ENST00000430669 CDKN2A-AS1Q9UH64 79 aa8.43□□□□□ -1.06
PTCH1-208ENST00000430669 MTORP42345 2549 aa8.43□□□□□ -1.06
PTCH1-208ENST00000430669 CD164L2Q6UWJ8 174 aa8.42□□□□□ -1.06
PTCH1-208ENST00000430669 IGIPA6NJ69 53 aa8.42□□□□□ -1.06
PTCH1-208ENST00000430669 KRTAP10-9P60411 292 aa8.42□□□□□ -1.06
PTCH1-208ENST00000430669 IGHV4-28A0A0C4DH34 117 aa8.42□□□□□ -1.06
PTCH1-208ENST00000430669 hADV29S1A0JD25 119 aa8.42□□□□□ -1.06
PTCH1-208ENST00000430669 TRAV10A0A0B4J240 114 aa8.42□□□□□ -1.06
PTCH1-208ENST00000430669 UBE2D3P61077 147 aa8.42□□□□□ -1.06
PTCH1-208ENST00000430669 UBE2D2P62837 147 aa8.42□□□□□ -1.06
PTCH1-208ENST00000430669 ESM1Q9NQ30 184 aa8.42□□□□□ -1.06
PTCH1-208ENST00000430669 C2orf91Q6ZV80 131 aa8.41□□□□□ -1.06
PTCH1-208ENST00000430669 LAMA1P25391 3075 aa8.41□□□□□ -1.06
PTCH1-208ENST00000430669 TRBV30A0A0K0K1B3 111 aa8.41□□□□□ -1.06
PTCH1-208ENST00000430669 FOXI1Q12951 378 aa8.41□□□□□ -1.06
PTCH1-208ENST00000430669 BEAN1Q3B7T3 259 aa8.41□□□□□ -1.06
PTCH1-208ENST00000430669 G3V4G9 280 aa8.41□□□□□ -1.06
PTCH1-208ENST00000430669 ODF3L2Q3SX64 289 aa8.41□□□□□ -1.06
PTCH1-208ENST00000430669 LINC00308Q8TCZ7 52 aa8.4□□□□□ -1.06
PTCH1-208ENST00000430669 TTTY13Q9BZ97 58 aa8.4□□□□□ -1.06
PTCH1-208ENST00000430669 RNASE8Q8TDE3 154 aaKnown RBP8.4□□□□□ -1.06
PTCH1-208ENST00000430669 TCL1BO95988 128 aa8.4□□□□□ -1.07
PTCH1-208ENST00000430669 FAM19A4Q96LR4 140 aa8.39□□□□□ -1.07
PTCH1-208ENST00000430669 VPS13AQ96RL7 3174 aa8.39□□□□□ -1.07
PTCH1-208ENST00000430669 RBM3P98179 157 aaKnown RBP8.39□□□□□ -1.07
PTCH1-208ENST00000430669 CHCHD7Q9BUK0 85 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms