RNA–Protein interactions for RNA: ENST00000429968.5

RBM39-212, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,149 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-212ENST00000429968 RPL35AP18077 110 aaKnown RBP10.01□□□□□ -0.81
RBM39-212ENST00000429968 C12orf74Q32Q52 190 aa10.01□□□□□ -0.81
RBM39-212ENST00000429968 ZNF418Q8TF45 676 aaPredicted RBP10.01□□□□□ -0.81
RBM39-212ENST00000429968 C2CD3Q4AC94 2353 aa10.01□□□□□ -0.81
RBM39-212ENST00000429968 TAL2Q16559 108 aa10.01□□□□□ -0.81
RBM39-212ENST00000429968 SAMD5Q5TGI4 173 aa10.01□□□□□ -0.81
RBM39-212ENST00000429968 A0A0J9YY99 117 aa10□□□□□ -0.81
RBM39-212ENST00000429968 TMEM223A0PJW6 202 aa10□□□□□ -0.81
RBM39-212ENST00000429968 PLAC8L1A1L4L8 177 aa10□□□□□ -0.81
RBM39-212ENST00000429968 PAPPA-AS1Q5QFB9 102 aa10□□□□□ -0.81
RBM39-212ENST00000429968 SCGB1D4Q6XE38 83 aa10□□□□□ -0.81
RBM39-212ENST00000429968 UBE2D4Q9Y2X8 147 aa10□□□□□ -0.81
RBM39-212ENST00000429968 RHODO00212 210 aa9.99□□□□□ -0.81
RBM39-212ENST00000429968 SPCS1Q9Y6A9 102 aa9.99□□□□□ -0.81
RBM39-212ENST00000429968 IGLL5B9A064 214 aa9.98□□□□□ -0.81
RBM39-212ENST00000429968 NDUFA7O95182 113 aa9.98□□□□□ -0.81
RBM39-212ENST00000429968 HERVK_113P61574 105 aa9.98□□□□□ -0.81
RBM39-212ENST00000429968 Q6ZUT4 128 aa9.98□□□□□ -0.81
RBM39-212ENST00000429968 PYGO1Q9Y3Y4 419 aa9.98□□□□□ -0.81
RBM39-212ENST00000429968 HIVEP1P15822 2718 aa9.98□□□□□ -0.81
RBM39-212ENST00000429968 J3QQQ9 107 aa9.98□□□□□ -0.81
RBM39-212ENST00000429968 NOP10Q9NPE3 64 aaKnown RBP9.98□□□□□ -0.81
RBM39-212ENST00000429968 CSNK1G2-AS1Q8NCQ2 148 aa9.97□□□□□ -0.81
RBM39-212ENST00000429968 TMEM263Q8WUH6 116 aaKnown RBP9.97□□□□□ -0.81
RBM39-212ENST00000429968 NBEAL2Q6ZNJ1 2754 aa9.97□□□□□ -0.81
RBM39-212ENST00000429968 A0A1B0GWB2 263 aa9.97□□□□□ -0.81
RBM39-212ENST00000429968 DNAJC30Q96LL9 226 aa9.97□□□□□ -0.81
RBM39-212ENST00000429968 TRAV8-3A0A0A6YYJ7 113 aa9.96□□□□□ -0.82
RBM39-212ENST00000429968 TINCRA0A1B0GVN0 87 aa9.96□□□□□ -0.82
RBM39-212ENST00000429968 FABP2P12104 132 aa9.96□□□□□ -0.82
RBM39-212ENST00000429968 B5MCH6 92 aa9.95□□□□□ -0.82
RBM39-212ENST00000429968 INAFM1C9JVW0 142 aa9.95□□□□□ -0.82
RBM39-212ENST00000429968 LINC00694P0DN24 101 aa9.95□□□□□ -0.82
RBM39-212ENST00000429968 LINC01620Q4KN68 170 aa9.95□□□□□ -0.82
RBM39-212ENST00000429968 TRRAPQ9Y4A5 3859 aa9.95□□□□□ -0.82
RBM39-212ENST00000429968 LEPROTO15243 131 aa9.95□□□□□ -0.82
RBM39-212ENST00000429968 MRPS36P82909 103 aaKnown RBP9.95□□□□□ -0.82
RBM39-212ENST00000429968 NTM-AS1Q6ZSK4 140 aa9.95□□□□□ -0.82
RBM39-212ENST00000429968 LINC00336Q6ZUF6 198 aa9.95□□□□□ -0.82
RBM39-212ENST00000429968 SLC25A29Q8N8R3 303 aa9.95□□□□□ -0.82
RBM39-212ENST00000429968 GTSF1LQ9H1H1 148 aa9.95□□□□□ -0.82
RBM39-212ENST00000429968 IGHV3-30P01768 117 aa9.94□□□□□ -0.82
RBM39-212ENST00000429968 IGHV3-30-5P0DP03 117 aa9.94□□□□□ -0.82
RBM39-212ENST00000429968 SRSF9Q13242 221 aaKnown RBP eCLIP9.94□□□□□ -0.825e-10■■■■□ 22.3
RBM39-212ENST00000429968 C10orf126Q8N4M7 172 aa9.94□□□□□ -0.82
RBM39-212ENST00000429968 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.94□□□□□ -0.82
RBM39-212ENST00000429968 OR13C6PQ8NH95 151 aa9.94□□□□□ -0.82
RBM39-212ENST00000429968 LOC100131303A0A0U1RQF7 123 aa9.94□□□□□ -0.82
RBM39-212ENST00000429968 LGALS3P17931 250 aaKnown RBP9.94□□□□□ -0.82
RBM39-212ENST00000429968 K7EQD1 137 aa9.93□□□□□ -0.82
RBM39-212ENST00000429968 UBE2D1P51668 147 aa9.93□□□□□ -0.82
RBM39-212ENST00000429968 LINC00482Q8N8I6 264 aa9.93□□□□□ -0.82
RBM39-212ENST00000429968 RNF183Q96D59 192 aa9.93□□□□□ -0.82
RBM39-212ENST00000429968 EIF4EBP3O60516 100 aaPredicted RBP9.92□□□□□ -0.82
RBM39-212ENST00000429968 GAGE7O76087 117 aa9.92□□□□□ -0.82
RBM39-212ENST00000429968 GAGE12FP0CL80 117 aa9.92□□□□□ -0.82
RBM39-212ENST00000429968 GAGE12GP0CL81 117 aa9.92□□□□□ -0.82
RBM39-212ENST00000429968 GAGE12IP0CL82 117 aa9.92□□□□□ -0.82
RBM39-212ENST00000429968 RRN3P1Q2M238 152 aa9.92□□□□□ -0.82
RBM39-212ENST00000429968 TRAV4A0A0B4J268 109 aa9.92□□□□□ -0.82
RBM39-212ENST00000429968 GAGE12JA6NER3 117 aa9.92□□□□□ -0.82
RBM39-212ENST00000429968 IGHV3-30-3P0DP02 117 aa9.92□□□□□ -0.82
RBM39-212ENST00000429968 GAGE4Q13068 117 aa9.92□□□□□ -0.82
RBM39-212ENST00000429968 GAGE13Q4V321 117 aa9.92□□□□□ -0.82
RBM39-212ENST00000429968 DAZ2Q13117 558 aaKnown RBP9.91□□□□□ -0.82
RBM39-212ENST00000429968 SFTA2Q6UW10 78 aa9.91□□□□□ -0.82
RBM39-212ENST00000429968 NDUFA11Q86Y39 141 aa9.91□□□□□ -0.82
RBM39-212ENST00000429968 SPANXB1Q9NS25 103 aaPredicted RBP9.91□□□□□ -0.82
RBM39-212ENST00000429968 APOMO95445 188 aa9.91□□□□□ -0.82
RBM39-212ENST00000429968 SPINK8P0C7L1 97 aa9.91□□□□□ -0.82
RBM39-212ENST00000429968 COX6A2Q02221 97 aa9.91□□□□□ -0.82
RBM39-212ENST00000429968 UBE2D3P61077 147 aa9.9□□□□□ -0.82
RBM39-212ENST00000429968 UBE2D2P62837 147 aa9.9□□□□□ -0.82
RBM39-212ENST00000429968 TMEM126AQ9H061 195 aa9.9□□□□□ -0.82
RBM39-212ENST00000429968 C16orf74Q96GX8 76 aa9.89□□□□□ -0.83
RBM39-212ENST00000429968 TIMM21Q9BVV7 248 aa9.89□□□□□ -0.83
RBM39-212ENST00000429968 ATRQ13535 2644 aa9.89□□□□□ -0.83
RBM39-212ENST00000429968 H3BMG7 143 aa9.89□□□□□ -0.83
RBM39-212ENST00000429968 J3QR89 54 aa9.89□□□□□ -0.83
RBM39-212ENST00000429968 CFC1BP0CG36 223 aa9.89□□□□□ -0.83
RBM39-212ENST00000429968 CFC1P0CG37 223 aa9.89□□□□□ -0.83
RBM39-212ENST00000429968 SPATA25Q9BR10 227 aa9.89□□□□□ -0.83
RBM39-212ENST00000429968 A0A0J9YXY3 114 aa9.88□□□□□ -0.83
RBM39-212ENST00000429968 CMC4P56277 68 aaPredicted RBP9.88□□□□□ -0.83
RBM39-212ENST00000429968 RPL24P83731 157 aaKnown RBP9.88□□□□□ -0.83
RBM39-212ENST00000429968 SBSPONQ8IVN8 264 aa9.88□□□□□ -0.83
RBM39-212ENST00000429968 LITAFQ99732 161 aa9.88□□□□□ -0.83
RBM39-212ENST00000429968 CDKN2A-AS1Q9UH64 79 aa9.88□□□□□ -0.83
RBM39-212ENST00000429968 TRGV2A0A075B6R0 118 aa9.88□□□□□ -0.83
RBM39-212ENST00000429968 RPL36AP83881 106 aaKnown RBP9.88□□□□□ -0.83
RBM39-212ENST00000429968 RPL36ALQ969Q0 106 aaKnown RBP9.88□□□□□ -0.83
RBM39-212ENST00000429968 TEP1Q99973 2627 aaKnown RBP9.87□□□□□ -0.83
RBM39-212ENST00000429968 IGHV1-58A0A0C4DH39 117 aa9.87□□□□□ -0.83
RBM39-212ENST00000429968 VSIG2Q96IQ7 327 aa9.87□□□□□ -0.83
RBM39-212ENST00000429968 OVOL2Q9BRP0 275 aa9.87□□□□□ -0.83
RBM39-212ENST00000429968 PRO0628Q9UI54 55 aa9.87□□□□□ -0.83
RBM39-212ENST00000429968 TRBV10-1A0A0K0K1A3 114 aa9.86□□□□□ -0.83
RBM39-212ENST00000429968 ADAMTSL4-AS1Q5T5F5 129 aa9.86□□□□□ -0.83
RBM39-212ENST00000429968 GAGE12HA6NDE8 117 aa9.86□□□□□ -0.83
RBM39-212ENST00000429968 F8W1H4 67 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms