RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 HLA-DRB4P13762 266 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 COX7CP15954 63 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 NPC2P61916 151 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 UBE2L3P68036 154 aaKnown RBP2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 HBG1P69891 147 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 HBG2P69892 147 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 C12orf73Q69YU5 71 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 C6orf201Q7Z4U5 140 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 SLC25A38Q96DW6 304 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 ZC2HC1AQ96GY0 325 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 FMC1Q96HJ9 113 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 CARD19Q96LW7 228 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 IMUPQ9GZP8 106 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 LINC00574Q9H8X3 128 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 TMEM14AQ9Y6G1 99 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 HLA-DRB4X5D2U9 266 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 DNAH2Q9P225 4427 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 FAT2Q9NYQ8 4349 aa2.99□□□□□ -1.93
HMGB3P5-201ENST00000428894 DYNC1H1Q14204 4646 aaKnown RBP2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 DNAH17Q9UFH2 4485 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 TRAV12-2A0A075B6T6 113 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 SMIM26A0A096LP01 95 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 IGHV3-72A0A0B4J1Y9 119 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 TRAV4A0A0B4J268 109 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 ATOX1O00244 68 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 IGHV3-23P01764 117 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 SCGB1C2P0DMR2 95 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 CGB3P0DN86 165 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 CGB7P0DN87 165 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 SUB1P53999 127 aaKnown RBP eCLIP2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 PSMG4Q5JS54 123 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 SCGB1D4Q6XE38 83 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 ZNF493Q6ZR52 646 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 LINC01561Q8N1V8 128 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 LINC00311Q8N616 119 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 C15orf53Q8NAA6 179 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 IGF2BP2-AS1Q96M15 143 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 MGST2Q99735 147 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 RNF126Q9BV68 326 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 TM2D1Q9BX74 207 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 GNB1LQ9BYB4 327 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 AGPAT4-IT1Q9H0P7 198 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 CALYQ9NYX4 217 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 KLK12Q9UKR0 248 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 SERP1Q9Y6X1 66 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 HERC1Q15751 4861 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 DNAH11Q96DT5 4516 aa2.98□□□□□ -1.93
HMGB3P5-201ENST00000428894 PKD1P98161 4303 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 TRBV19A0A075B6N1 114 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 TRAV8-1A0A0A6YYK1 113 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 IGHV7-81A0A0B4J1V7 117 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 TRAV1-1A0A0B4J248 108 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 CEBPZOSA8MTT3 80 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 E9PLD3 99 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 SSSCA1O60232 199 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 IGHV3-11P01762 117 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 IGKCP01834 107 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 CXCL5P42830 114 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 RPL23P62829 140 aaKnown RBP2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 DAZ2Q13117 558 aaKnown RBP2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 CDK5R1Q15078 307 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 LINC00305Q7Z4B0 112 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 DAZ4Q86SG3 579 aaKnown RBP2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 PRR15Q8IV56 129 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 SRSF12Q8WXF0 261 aaKnown RBP2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 LEAP2Q969E1 77 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 SPACA5Q96QH8 159 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 SHANK2-AS3Q9BTD1 123 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 DAZ1Q9NQZ3 744 aaKnown RBP2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 DAZ3Q9NR90 486 aaKnown RBP2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 CKLFQ9UBR5 152 aa2.97□□□□□ -1.93
HMGB3P5-201ENST00000428894 HSPG2P98160 4391 aa2.96□□□□□ -1.93
HMGB3P5-201ENST00000428894 IGKV1-27A0A075B6S5 117 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 TRBV7-7A0A0K0K1E9 115 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 LOC107986453A0A1B0GWG9 222 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 PGPA6NDG6 321 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 H3BUA1 57 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 PDCD6O75340 191 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 HLA-DQA1P01909 254 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 APCSP02743 223 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 TRGV3P03979 118 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 TCRAP04437 139 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 CD7P09564 240 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 CCL1P22362 96 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 ZNF137PP52743 207 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 SYNJ2BPP57105 145 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 SP6Q3SY56 376 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 CFAP126Q5VTH2 177 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 C2orf91Q6ZV80 131 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 LHFPL1Q86WI0 220 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 RNF182Q8N6D2 247 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 NPBQ8NG41 125 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 TSKUQ8WUA8 353 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 OTORQ9NRC9 128 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 ZNF355PQ9NSJ1 428 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 R4GMQ9 66 aa2.96□□□□□ -1.94
HMGB3P5-201ENST00000428894 IGHV1-24A0A0C4DH33 117 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 IZUMO1RA6ND01 250 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 IGLL5B9A064 214 aa2.95□□□□□ -1.94
HMGB3P5-201ENST00000428894 C11orf94C9JXX5 98 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms