RNA–Protein interactions for RNA: ENST00000428135.7

SNX13-203, Transcript of sorting nexin 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX13, Length 6,357 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-203ENST00000428135 LINC01545Q5VT33 79 aa7.24□□□□□ -1.25
SNX13-203ENST00000428135 CLUHP3Q96NS8 147 aa7.24□□□□□ -1.25
SNX13-203ENST00000428135 C11orf1Q9H5F2 150 aa7.24□□□□□ -1.25
SNX13-203ENST00000428135 PSMG3-AS1Q96PY0 264 aa7.23□□□□□ -1.25
SNX13-203ENST00000428135 CFAP126Q5VTH2 177 aa7.23□□□□□ -1.25
SNX13-203ENST00000428135 LYRM9A8MSI8 78 aa7.23□□□□□ -1.25
SNX13-203ENST00000428135 SIVA1O15304 175 aa7.23□□□□□ -1.25
SNX13-203ENST00000428135 FAM19A1Q7Z5A9 133 aa7.23□□□□□ -1.25
SNX13-203ENST00000428135 PKIGQ9Y2B9 76 aa7.23□□□□□ -1.25
SNX13-203ENST00000428135 IGHV1-58A0A0C4DH39 117 aa7.23□□□□□ -1.25
SNX13-203ENST00000428135 MED14OSP0DP75 135 aa7.23□□□□□ -1.25
SNX13-203ENST00000428135 EXPH5Q8NEV8 1989 aa7.23□□□□□ -1.25
SNX13-203ENST00000428135 BRI3O95415 125 aa7.23□□□□□ -1.25
SNX13-203ENST00000428135 CRIP1P50238 77 aa7.23□□□□□ -1.25
SNX13-203ENST00000428135 ODF1Q14990 250 aa7.23□□□□□ -1.25
SNX13-203ENST00000428135 C2CD3Q4AC94 2353 aa7.22□□□□□ -1.25
SNX13-203ENST00000428135 HECTD1Q9ULT8 2610 aa7.22□□□□□ -1.25
SNX13-203ENST00000428135 IGLV2-8P01709 118 aa7.22□□□□□ -1.25
SNX13-203ENST00000428135 A8MZ25 164 aa7.22□□□□□ -1.25
SNX13-203ENST00000428135 NREPQ16612 68 aa7.22□□□□□ -1.25
SNX13-203ENST00000428135 EIF4EBP1Q13541 118 aaPredicted RBP7.22□□□□□ -1.25
SNX13-203ENST00000428135 TP73-AS1Q9UF72 201 aa7.22□□□□□ -1.25
SNX13-203ENST00000428135 KPRPQ5T749 579 aaPredicted RBP7.22□□□□□ -1.25
SNX13-203ENST00000428135 CDKN2A-AS1Q9UH64 79 aa7.22□□□□□ -1.25
SNX13-203ENST00000428135 B9D2Q9BPU9 175 aa7.21□□□□□ -1.25
SNX13-203ENST00000428135 EBI3Q14213 229 aa7.21□□□□□ -1.26
SNX13-203ENST00000428135 PPDPFQ9H3Y8 114 aa7.21□□□□□ -1.26
SNX13-203ENST00000428135 E9PLD3 99 aa7.21□□□□□ -1.26
SNX13-203ENST00000428135 PRR9Q5T870 116 aa7.21□□□□□ -1.26
SNX13-203ENST00000428135 IGHV4-30-4P0DP06 118 aa7.21□□□□□ -1.26
SNX13-203ENST00000428135 IFITM1P13164 125 aa7.21□□□□□ -1.26
SNX13-203ENST00000428135 MIFP14174 115 aa7.21□□□□□ -1.26
SNX13-203ENST00000428135 HRCT1Q6UXD1 115 aa7.21□□□□□ -1.26
SNX13-203ENST00000428135 IGKV2-28A0A075B6P5 120 aa7.2□□□□□ -1.26
SNX13-203ENST00000428135 NDUFB1O75438 58 aa7.2□□□□□ -1.26
SNX13-203ENST00000428135 IGKV2D-28P01615 120 aa7.2□□□□□ -1.26
SNX13-203ENST00000428135 SLPIP03973 132 aa7.2□□□□□ -1.26
SNX13-203ENST00000428135 PIK3CD-AS1Q5SR53 167 aa7.2□□□□□ -1.26
SNX13-203ENST00000428135 C14orf132Q9NPU4 83 aa7.2□□□□□ -1.26
SNX13-203ENST00000428135 TRBV6-8A0A0A6YYG3 113 aa7.19□□□□□ -1.26
SNX13-203ENST00000428135 SMIM9A6NGZ8 99 aa7.19□□□□□ -1.26
SNX13-203ENST00000428135 MRPL52Q86TS9 123 aaKnown RBP7.19□□□□□ -1.26
SNX13-203ENST00000428135 TRAV10A0A0B4J240 114 aa7.19□□□□□ -1.26
SNX13-203ENST00000428135 COX7BP24311 80 aa7.19□□□□□ -1.26
SNX13-203ENST00000428135 CXCL5P42830 114 aa7.19□□□□□ -1.26
SNX13-203ENST00000428135 WFDC2Q14508 124 aa7.19□□□□□ -1.26
SNX13-203ENST00000428135 H0YGX0 51 aa7.18□□□□□ -1.26
SNX13-203ENST00000428135 C5orf47Q569G3 176 aa7.18□□□□□ -1.26
SNX13-203ENST00000428135 PTH2Q96A98 100 aa7.18□□□□□ -1.26
SNX13-203ENST00000428135 C14orf177Q52M58 125 aa7.18□□□□□ -1.26
SNX13-203ENST00000428135 CITED1Q99966 193 aa7.18□□□□□ -1.26
SNX13-203ENST00000428135 CHKB-CPT1BH3BT56 60 aa7.18□□□□□ -1.26
SNX13-203ENST00000428135 IGLC6P0CF74 106 aa7.17□□□□□ -1.26
SNX13-203ENST00000428135 ADAMTS20P59510 1910 aa7.17□□□□□ -1.26
SNX13-203ENST00000428135 LINC01620Q4KN68 170 aa7.17□□□□□ -1.26
SNX13-203ENST00000428135 Q8N6K4 173 aa7.17□□□□□ -1.26
SNX13-203ENST00000428135 C9orf85Q96MD7 179 aa7.17□□□□□ -1.26
SNX13-203ENST00000428135 LAMA2P24043 3122 aaKnown RBP7.17□□□□□ -1.26
SNX13-203ENST00000428135 RPL37AP8A6NKH3 93 aa7.17□□□□□ -1.26
SNX13-203ENST00000428135 SCXQ7RTU7 201 aa7.17□□□□□ -1.26
SNX13-203ENST00000428135 IGLV4-3A0A075B6K6 122 aa7.16□□□□□ -1.26
SNX13-203ENST00000428135 A0A0J9YXY3 114 aa7.16□□□□□ -1.26
SNX13-203ENST00000428135 M0QY20 66 aa7.16□□□□□ -1.26
SNX13-203ENST00000428135 RBM3P98179 157 aaKnown RBP7.16□□□□□ -1.26
SNX13-203ENST00000428135 C11orf21Q9P2W6 132 aa7.16□□□□□ -1.26
SNX13-203ENST00000428135 TET2Q6N021 2002 aaPredicted RBP7.16□□□□□ -1.26
SNX13-203ENST00000428135 UFSP1Q6NVU6 142 aa7.16□□□□□ -1.26
SNX13-203ENST00000428135 ODF3Q96PU9 254 aa7.16□□□□□ -1.26
SNX13-203ENST00000428135 RBX1P62877 108 aa7.15□□□□□ -1.26
SNX13-203ENST00000428135 GAS8-AS1O95177 125 aa7.15□□□□□ -1.26
SNX13-203ENST00000428135 WFDC9Q8NEX5 89 aa7.15□□□□□ -1.26
SNX13-203ENST00000428135 A0A1B0GXF2 115 aa7.15□□□□□ -1.26
SNX13-203ENST00000428135 SPINK6Q6UWN8 80 aa7.15□□□□□ -1.26
SNX13-203ENST00000428135 MLST8Q9BVC4 326 aa7.15□□□□□ -1.26
SNX13-203ENST00000428135 UNC80Q8N2C7 3258 aa7.15□□□□□ -1.27
SNX13-203ENST00000428135 IGLV1-40P01703 118 aa7.15□□□□□ -1.27
SNX13-203ENST00000428135 FSTL3O95633 263 aa7.14□□□□□ -1.27
SNX13-203ENST00000428135 RNASE3P12724 160 aaKnown RBP7.14□□□□□ -1.27
SNX13-203ENST00000428135 KIR2DL5BA0A0G2JN68 375 aa7.14□□□□□ -1.27
SNX13-203ENST00000428135 KIR2DL5BA0A0G2JPC4 375 aa7.14□□□□□ -1.27
SNX13-203ENST00000428135 KIR2DL5AQ8N109 375 aa7.14□□□□□ -1.27
SNX13-203ENST00000428135 A0A1B0GX51 115 aa7.14□□□□□ -1.27
SNX13-203ENST00000428135 MIAQ16674 131 aa7.14□□□□□ -1.27
SNX13-203ENST00000428135 SYCNQ0VAF6 134 aa7.14□□□□□ -1.27
SNX13-203ENST00000428135 F8P00451 2351 aa7.14□□□□□ -1.27
SNX13-203ENST00000428135 NDUFA7O95182 113 aa7.13□□□□□ -1.27
SNX13-203ENST00000428135 IGKV4-1P06312 121 aa7.13□□□□□ -1.27
SNX13-203ENST00000428135 RNF185Q96GF1 192 aa7.13□□□□□ -1.27
SNX13-203ENST00000428135 ANKRD17O75179 2603 aaKnown RBP7.13□□□□□ -1.27
SNX13-203ENST00000428135 TRBV6-4A0A1B0GX49 114 aa7.13□□□□□ -1.27
SNX13-203ENST00000428135 ATG2AQ2TAZ0 1938 aa7.12□□□□□ -1.27
SNX13-203ENST00000428135 ZNF22P17026 224 aaPredicted RBP7.12□□□□□ -1.27
SNX13-203ENST00000428135 COA6Q5JTJ3 125 aaKnown RBP7.12□□□□□ -1.27
SNX13-203ENST00000428135 MBD6Q96DN6 1003 aa7.12□□□□□ -1.27
SNX13-203ENST00000428135 IGLV2-11P01706 119 aa7.12□□□□□ -1.27
SNX13-203ENST00000428135 CDH23Q9H251 3354 aa7.12□□□□□ -1.27
SNX13-203ENST00000428135 XIRP2A4UGR9 3374 aa7.12□□□□□ -1.27
SNX13-203ENST00000428135 C7orf33Q8WU49 177 aa7.11□□□□□ -1.27
SNX13-203ENST00000428135 A0A0B4J2C4 111 aa7.11□□□□□ -1.27
SNX13-203ENST00000428135 IGLV9-49A0A0B4J1Y8 123 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms