RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 C10orf113Q5VZT2 155 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 SCGB1D4Q6XE38 83 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 MUSTN1Q8IVN3 82 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 VKORC1L1Q8N0U8 176 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 C20orf197Q8N268 126 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 TMEM75Q8N9X5 138 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 ZCCHC13Q8WW36 166 aaKnown RBP1.84□□□□□ -2.11
LINC01040-201ENST00000425048 CNFNQ9BYD5 112 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 BPESC1Q9GZL8 116 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 LAMTOR3Q9UHA4 124 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 SVILO95425 2214 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 TNCP24821 2201 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 TRAV7A0A075B6U4 112 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 IGHV5-51A0A0C4DH38 117 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 A0A0J9YX75 114 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 TMEM30CPA0ZSE6 113 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 RBMY1BA6NDE4 496 aaKnown RBP1.83□□□□□ -2.12
LINC01040-201ENST00000425048 RBMY1EA6NEQ0 496 aaKnown RBP1.83□□□□□ -2.12
LINC01040-201ENST00000425048 C11orf86A6NJI1 115 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 H3BTX0 84 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 H7C2G1 150 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 I3L3M4 83 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 K7EMT4 169 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 LHBP01229 141 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 RBMY1DP0C7P1 496 aaKnown RBP1.83□□□□□ -2.12
LINC01040-201ENST00000425048 RBMY1A1P0DJD3 496 aaKnown RBP1.83□□□□□ -2.12
LINC01040-201ENST00000425048 RBMY1CP0DJD4 496 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 RPL28P46779 137 aaKnown RBP1.83□□□□□ -2.12
LINC01040-201ENST00000425048 LAGE3Q14657 143 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 RBMY1FQ15415 496 aaKnown RBP1.83□□□□□ -2.12
LINC01040-201ENST00000425048 FAM27BQ5VT28 67 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 PRNTQ86SH4 94 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 KTN1-AS1Q86SY8 53 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 LY6G5BQ8NDX9 201 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 SPTSSAQ969W0 71 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 TOMM6Q96B49 74 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 TMEM14BQ9NUH8 114 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 LINC00588Q9Y4M8 146 aa1.83□□□□□ -2.12
LINC01040-201ENST00000425048 CADP27708 2225 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 BRWD1Q9NSI6 2320 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 TRAV8-3A0A0A6YYJ7 113 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 TRAV13-2A0A0B4J235 113 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 IGHV5-10-1A0A0J9YXX1 117 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 SDHAF1A6NFY7 115 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 C12orf77C9JDV5 145 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 F8WEM9 126 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 M0R378 163 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 COX7A2P2O60397 106 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 SH2D1AO60880 128 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 INAFM2P0DMQ5 153 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 RNASE4P34096 147 aaKnown RBP1.82□□□□□ -2.12
LINC01040-201ENST00000425048 DAD1P61803 113 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 RBM3P98179 157 aaKnown RBP1.82□□□□□ -2.12
LINC01040-201ENST00000425048 PRCDQ00LT1 54 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 PLGLAQ15195 96 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 CLLU1OSQ5K130 101 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 VMO1Q7Z5L0 202 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 WDR86Q86TI4 376 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 NKAPP1Q8N9T2 125 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 OBSCN-AS1Q96MR7 158 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 C11orf68Q9H3H3 251 aaKnown RBP1.82□□□□□ -2.12
LINC01040-201ENST00000425048 LINC00846Q9NV44 126 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 MRPL36Q9P0J6 103 aaKnown RBP1.82□□□□□ -2.12
LINC01040-201ENST00000425048 TMEM14CQ9P0S9 112 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 SEC16AO15027 2179 aa1.82□□□□□ -2.12
LINC01040-201ENST00000425048 TRBV27A0A0K0K1C4 114 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 E7EQL1 145 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 M0R1W7 72 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 COX7A2LO14548 114 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 LEPROTO15243 131 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 NDUFC1O43677 76 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 TRBV12-3P01733 135 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 COX6CP09669 75 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 BAALC-AS2P0C853 105 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 LGALS3P17931 250 aaKnown RBP1.81□□□□□ -2.12
LINC01040-201ENST00000425048 SOSTDC1Q6X4U4 206 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 Q6ZS52 159 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 SCGB3A1Q96QR1 104 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 SMIM2Q9BVW6 85 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 DEFB127Q9H1M4 99 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 BAHCC1Q9P281 2608 aa1.81□□□□□ -2.12
LINC01040-201ENST00000425048 TRAV23DV6A0A075B6W5 121 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 IGHV1-45A0A0A0MS14 117 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 IGHV1-69DA0A0B4J2H0 117 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 TRBV10-3A0A0K0K1G6 114 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 A6NN06 94 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 C10orf142B7Z368 130 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 J3QT63 122 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 ZNF73O43830 326 aaPredicted RBP1.8□□□□□ -2.12
LINC01040-201ENST00000425048 NDUFS5O43920 106 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 TRGV3P03979 118 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 MIFP14174 115 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 CD52P31358 61 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 ZNF80P51504 273 aaPredicted RBP1.8□□□□□ -2.12
LINC01040-201ENST00000425048 Q1T7F1 81 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 ESRGQ1W209 222 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 ATP5EP2Q5VTU8 51 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 PHF5AQ7RTV0 110 aaKnown RBP1.8□□□□□ -2.12
LINC01040-201ENST00000425048 SNURFQ9Y675 71 aa1.8□□□□□ -2.12
LINC01040-201ENST00000425048 NAV3Q8IVL0 2385 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms