RNA–Protein interactions for RNA: ENST00000424059.1

PMS1-209, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 2,004 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-209ENST00000424059 COL4A1P02462 1669 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 IGHV3-21A0A0B4J1V1 117 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 CXorf51AA0A1B0GTR3 108 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 RPL37AP8A6NKH3 93 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 A8MWP4 228 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 D6R8Y8 96 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 LECT2O14960 151 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 RTL8CO15255 209 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 CRPP02741 224 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 P0C880 135 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 KRTAP12-2P59991 146 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 LUZP6Q538Z0 58 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 LYZL1Q6UWQ5 148 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 MUSTN1Q8IVN3 82 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 C1orf147Q96MC9 270 aaPredicted RBP1.88□□□□□ -2.11
PMS1-209ENST00000424059 LINC00467Q9BRT7 94 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 OCR1Q9BZK8 76 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 PRR34Q9NV39 138 aa1.88□□□□□ -2.11
PMS1-209ENST00000424059 COL5A1P20908 1838 aaPredicted RBP1.87□□□□□ -2.11
PMS1-209ENST00000424059 IGLV7-46A0A075B6I9 117 aa1.87□□□□□ -2.11
PMS1-209ENST00000424059 TRAV10A0A0B4J240 114 aa1.87□□□□□ -2.11
PMS1-209ENST00000424059 A6NED7 52 aa1.87□□□□□ -2.11
PMS1-209ENST00000424059 IGIPA6NJ69 53 aa1.87□□□□□ -2.11
PMS1-209ENST00000424059 IGLV3-25P01717 112 aa1.87□□□□□ -2.11
PMS1-209ENST00000424059 ARL14EPLP0DKL9 152 aa1.87□□□□□ -2.11
PMS1-209ENST00000424059 DEFA4P12838 97 aa1.87□□□□□ -2.11
PMS1-209ENST00000424059 Q6ZQT0 140 aa1.87□□□□□ -2.11
PMS1-209ENST00000424059 C7orf33Q8WU49 177 aa1.87□□□□□ -2.11
PMS1-209ENST00000424059 CAMK2N2Q96S95 79 aa1.87□□□□□ -2.11
PMS1-209ENST00000424059 RPP21Q9H633 154 aaKnown RBP1.87□□□□□ -2.11
PMS1-209ENST00000424059 DPM3Q9P2X0 92 aa1.87□□□□□ -2.11
PMS1-209ENST00000424059 ZNF407Q9C0G0 2248 aa1.87□□□□□ -2.11
PMS1-209ENST00000424059 IGHV3OR16-8A0A075B7F1 116 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 A0A087WW49 117 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 TRBV6-6A0A0A6YYG2 114 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 IGHV7-4-1A0A0J9YVY3 117 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 LRCOL1A6NCL2 159 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 CPSF4LA6NMK7 179 aaKnown RBP1.86□□□□□ -2.11
PMS1-209ENST00000424059 F8VRH5 84 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 I3L3M4 83 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 DNAL4O96015 105 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 Q1RN00 199 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 LCE3EQ5T5B0 92 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 ZNF833PQ6ZTB9 187 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 NDUFA4L2Q9NRX3 87 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 GON4LQ3T8J9 2241 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 NUP214P35658 2090 aaPredicted RBP1.86□□□□□ -2.11
PMS1-209ENST00000424059 IGHV4-4A0A075B6R2 117 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 CLPSL1A2RUU4 121 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 HMGN4O00479 90 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 IGKV3-11P04433 115 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 ZNF137PP52743 207 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 ENHOQ6UWT2 76 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 Q8NAQ8 132 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 AMELXQ99217 191 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 PRR15LQ9BU68 103 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 TTTY10Q9BZA0 68 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 TMEM167BQ9NRX6 74 aa1.86□□□□□ -2.11
PMS1-209ENST00000424059 IGHV4-30-2A0A087WSY4 118 aa1.85□□□□□ -2.11
PMS1-209ENST00000424059 IGHV3-73A0A0B4J1V6 119 aa1.85□□□□□ -2.11
PMS1-209ENST00000424059 TRAV12-3A0A0B4J271 114 aa1.85□□□□□ -2.11
PMS1-209ENST00000424059 A0A0J9YX75 114 aa1.85□□□□□ -2.11
PMS1-209ENST00000424059 A0A0J9YXY3 114 aa1.85□□□□□ -2.11
PMS1-209ENST00000424059 A0A1W2PNM2 257 aa1.85□□□□□ -2.11
PMS1-209ENST00000424059 H7C2G1 150 aa1.85□□□□□ -2.11
PMS1-209ENST00000424059 NDUFA3O95167 84 aa1.85□□□□□ -2.11
PMS1-209ENST00000424059 IGLV1-47P01700 117 aa1.85□□□□□ -2.11
PMS1-209ENST00000424059 MSMBP08118 114 aa1.85□□□□□ -2.11
PMS1-209ENST00000424059 SAA2P0DJI9 122 aaPredicted RBP1.85□□□□□ -2.11
PMS1-209ENST00000424059 TFF3Q07654 80 aa1.85□□□□□ -2.11
PMS1-209ENST00000424059 MIR22HGQ0VDD5 57 aa1.85□□□□□ -2.11
PMS1-209ENST00000424059 NREPQ16612 68 aa1.85□□□□□ -2.11
PMS1-209ENST00000424059 Q6ZR54 194 aa1.85□□□□□ -2.11
PMS1-209ENST00000424059 FDCSPQ8NFU4 85 aa1.85□□□□□ -2.11
PMS1-209ENST00000424059 TET1Q8NFU7 2136 aa1.85□□□□□ -2.11
PMS1-209ENST00000424059 UBALD1Q8TB05 177 aa1.85□□□□□ -2.11
PMS1-209ENST00000424059 PLAC8Q9NZF1 115 aa1.85□□□□□ -2.11
PMS1-209ENST00000424059 DHRS4-AS1Q9P1J3 65 aa1.85□□□□□ -2.11
PMS1-209ENST00000424059 MUC4Q99102 2169 aa1.85□□□□□ -2.11
PMS1-209ENST00000424059 IGHV3-49A0A0A0MS15 119 aa1.84□□□□□ -2.11
PMS1-209ENST00000424059 IGHV3-15A0A0B4J1V0 119 aa1.84□□□□□ -2.11
PMS1-209ENST00000424059 LCE6AA0A183 80 aa1.84□□□□□ -2.11
PMS1-209ENST00000424059 A0A1B0GUT8 65 aa1.84□□□□□ -2.11
PMS1-209ENST00000424059 M0R135 149 aa1.84□□□□□ -2.11
PMS1-209ENST00000424059 M0R1W7 72 aa1.84□□□□□ -2.11
PMS1-209ENST00000424059 IGHV3-23P01764 117 aa1.84□□□□□ -2.11
PMS1-209ENST00000424059 ELOF1P60002 83 aaKnown RBP1.84□□□□□ -2.11
PMS1-209ENST00000424059 LINC01590Q5TEZ4 76 aa1.84□□□□□ -2.11
PMS1-209ENST00000424059 CSAG1Q6PB30 78 aa1.84□□□□□ -2.11
PMS1-209ENST00000424059 C14orf178Q8N769 122 aaPredicted RBP1.84□□□□□ -2.11
PMS1-209ENST00000424059 MUC7Q8TAX7 377 aa1.84□□□□□ -2.11
PMS1-209ENST00000424059 ARHGAP5-AS1Q96IT6 56 aa1.84□□□□□ -2.11
PMS1-209ENST00000424059 DEC1Q9P2X7 70 aa1.84□□□□□ -2.11
PMS1-209ENST00000424059 HEATR5BQ9P2D3 2071 aa1.84□□□□□ -2.11
PMS1-209ENST00000424059 A0A087WSZ3 146 aa1.84□□□□□ -2.12
PMS1-209ENST00000424059 TRBV6-5A0A0K0K1A5 114 aa1.84□□□□□ -2.12
PMS1-209ENST00000424059 LOC730098B7Z3J9 87 aa1.84□□□□□ -2.12
PMS1-209ENST00000424059 K7ERS5 55 aa1.84□□□□□ -2.12
PMS1-209ENST00000424059 IGLV3-19P01714 112 aa1.84□□□□□ -2.12
PMS1-209ENST00000424059 CTSGP08311 255 aa1.84□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms