RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 LINC00482Q8N8I6 264 aa12.02□□□□□ -0.49
CMTM3-202ENST00000424011 C11orf72Q8NBR9 251 aa12.02□□□□□ -0.49
CMTM3-202ENST00000424011 F8VRH5 84 aa12.02□□□□□ -0.49
CMTM3-202ENST00000424011 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.02□□□□□ -0.49
CMTM3-202ENST00000424011 BAALCQ8WXS3 180 aa12.02□□□□□ -0.49
CMTM3-202ENST00000424011 M0QXV9 152 aa12□□□□□ -0.49
CMTM3-202ENST00000424011 C1orf158Q8N1D5 194 aa12□□□□□ -0.49
CMTM3-202ENST00000424011 SCGB1C2P0DMR2 95 aa11.99□□□□□ -0.49
CMTM3-202ENST00000424011 C19orf73Q9NVV2 129 aa11.99□□□□□ -0.49
CMTM3-202ENST00000424011 TP53TG1Q9Y2A0 90 aa11.99□□□□□ -0.49
CMTM3-202ENST00000424011 JMJD1CQ15652 2540 aa11.99□□□□□ -0.49
CMTM3-202ENST00000424011 SRSF9Q13242 221 aaKnown RBP eCLIP11.98□□□□□ -0.49
CMTM3-202ENST00000424011 IGHV3OR16-12A0A075B7B8 117 aa11.98□□□□□ -0.49
CMTM3-202ENST00000424011 TSHBP01222 138 aa11.98□□□□□ -0.49
CMTM3-202ENST00000424011 RPL39P62891 51 aaKnown RBP11.98□□□□□ -0.49
CMTM3-202ENST00000424011 MEIG1Q5JSS6 88 aa11.97□□□□□ -0.49
CMTM3-202ENST00000424011 IGIPA6NJ69 53 aa11.97□□□□□ -0.49
CMTM3-202ENST00000424011 SLC25A20O43772 301 aa11.97□□□□□ -0.49
CMTM3-202ENST00000424011 RHOHQ15669 191 aa11.97□□□□□ -0.49
CMTM3-202ENST00000424011 ZNF815PA8K554 130 aa11.96□□□□□ -0.49
CMTM3-202ENST00000424011 I3L3M4 83 aa11.96□□□□□ -0.49
CMTM3-202ENST00000424011 SCGB1D4Q6XE38 83 aa11.96□□□□□ -0.49
CMTM3-202ENST00000424011 TMEM263Q8WUH6 116 aaKnown RBP11.96□□□□□ -0.49
CMTM3-202ENST00000424011 WNK1Q9H4A3 2382 aa11.96□□□□□ -0.5
CMTM3-202ENST00000424011 TMEM126AQ9H061 195 aa11.95□□□□□ -0.5
CMTM3-202ENST00000424011 IGHV3-73A0A0B4J1V6 119 aa11.95□□□□□ -0.5
CMTM3-202ENST00000424011 C9orf66Q5T8R8 295 aa11.95□□□□□ -0.5
CMTM3-202ENST00000424011 PLEKHB2Q96CS7 222 aa11.95□□□□□ -0.5
CMTM3-202ENST00000424011 TMEM141Q96I45 108 aa11.95□□□□□ -0.5
CMTM3-202ENST00000424011 PRADC1Q9BSG0 188 aa11.95□□□□□ -0.5
CMTM3-202ENST00000424011 RS1O15537 224 aa11.94□□□□□ -0.5
CMTM3-202ENST00000424011 IL17DQ8TAD2 202 aa11.94□□□□□ -0.5
CMTM3-202ENST00000424011 PPDPFQ9H3Y8 114 aa11.94□□□□□ -0.5
CMTM3-202ENST00000424011 RPL35AP18077 110 aaKnown RBP11.94□□□□□ -0.5
CMTM3-202ENST00000424011 WFDC10AQ9H1F0 79 aa11.94□□□□□ -0.5
CMTM3-202ENST00000424011 TEP1Q99973 2627 aaKnown RBP11.94□□□□□ -0.5
CMTM3-202ENST00000424011 GIG44P09565 113 aaPredicted RBP11.93□□□□□ -0.5
CMTM3-202ENST00000424011 C10orf126Q8N4M7 172 aa11.93□□□□□ -0.5
CMTM3-202ENST00000424011 TIMM17AQ99595 171 aa11.93□□□□□ -0.5
CMTM3-202ENST00000424011 DNAJC30Q96LL9 226 aa11.93□□□□□ -0.5
CMTM3-202ENST00000424011 C9JAW5 83 aa11.92□□□□□ -0.5
CMTM3-202ENST00000424011 IGHV3-53P01767 116 aa11.92□□□□□ -0.5
CMTM3-202ENST00000424011 P0DMU3 169 aa11.92□□□□□ -0.5
CMTM3-202ENST00000424011 FAM231AP0DMU4 169 aa11.92□□□□□ -0.5
CMTM3-202ENST00000424011 FAM231CP0DMU5 169 aa11.92□□□□□ -0.5
CMTM3-202ENST00000424011 C16orf74Q96GX8 76 aa11.92□□□□□ -0.5
CMTM3-202ENST00000424011 CFC1BP0CG36 223 aa11.92□□□□□ -0.5
CMTM3-202ENST00000424011 CFC1P0CG37 223 aa11.92□□□□□ -0.5
CMTM3-202ENST00000424011 IGLV4-69A0A075B6H9 119 aa11.91□□□□□ -0.5
CMTM3-202ENST00000424011 TRGV1A0A0A0MS02 117 aa11.91□□□□□ -0.5
CMTM3-202ENST00000424011 PMVKQ15126 192 aa11.91□□□□□ -0.5
CMTM3-202ENST00000424011 C15orf53Q8NAA6 179 aa11.91□□□□□ -0.5
CMTM3-202ENST00000424011 EMP1P54849 157 aa11.91□□□□□ -0.5
CMTM3-202ENST00000424011 DAZ2Q13117 558 aaKnown RBP11.91□□□□□ -0.5
CMTM3-202ENST00000424011 TRAV8-4A0A0B4J246 113 aa11.89□□□□□ -0.51
CMTM3-202ENST00000424011 C11orf86A6NJI1 115 aa11.89□□□□□ -0.51
CMTM3-202ENST00000424011 Q6ZSN1 163 aa11.89□□□□□ -0.51
CMTM3-202ENST00000424011 CSNK1G2-AS1Q8NCQ2 148 aa11.89□□□□□ -0.51
CMTM3-202ENST00000424011 NTN5Q8WTR8 489 aaPredicted RBP11.89□□□□□ -0.51
CMTM3-202ENST00000424011 PRO1854Q9UHT4 67 aa11.89□□□□□ -0.51
CMTM3-202ENST00000424011 KRTAP24-1Q3LI83 254 aa11.89□□□□□ -0.51
CMTM3-202ENST00000424011 PAPPA-AS1Q5QFB9 102 aa11.89□□□□□ -0.51
CMTM3-202ENST00000424011 OPRPNQ99935 248 aaPredicted RBP11.89□□□□□ -0.51
CMTM3-202ENST00000424011 Q9UF83 564 aa11.89□□□□□ -0.51
CMTM3-202ENST00000424011 TENM1Q9UKZ4 2725 aa11.89□□□□□ -0.51
CMTM3-202ENST00000424011 A0A0J9YY99 117 aa11.88□□□□□ -0.51
CMTM3-202ENST00000424011 C20orf203Q8NBC4 194 aa11.88□□□□□ -0.51
CMTM3-202ENST00000424011 IGHV3-30P01768 117 aa11.88□□□□□ -0.51
CMTM3-202ENST00000424011 IGHV3-30-5P0DP03 117 aa11.88□□□□□ -0.51
CMTM3-202ENST00000424011 RPL13AP40429 203 aaKnown RBP11.88□□□□□ -0.51
CMTM3-202ENST00000424011 LINC01600Q96MT4 127 aa11.88□□□□□ -0.51
CMTM3-202ENST00000424011 ATRQ13535 2644 aa11.87□□□□□ -0.51
CMTM3-202ENST00000424011 NACAE9PAV3 2078 aa11.87□□□□□ -0.51
CMTM3-202ENST00000424011 MRPL23Q16540 153 aaKnown RBP11.87□□□□□ -0.51
CMTM3-202ENST00000424011 MAST4O15021 2626 aa11.86□□□□□ -0.51
CMTM3-202ENST00000424011 PRIMA1Q86XR5 153 aa11.86□□□□□ -0.51
CMTM3-202ENST00000424011 NOP10Q9NPE3 64 aaKnown RBP11.86□□□□□ -0.51
CMTM3-202ENST00000424011 Q6ZTI0 123 aa11.86□□□□□ -0.51
CMTM3-202ENST00000424011 ZNRF2Q8NHG8 242 aa11.86□□□□□ -0.51
CMTM3-202ENST00000424011 CSDC2Q9Y534 153 aaKnown RBP11.86□□□□□ -0.51
CMTM3-202ENST00000424011 C5orf47Q569G3 176 aa11.85□□□□□ -0.51
CMTM3-202ENST00000424011 OVOL2Q9BRP0 275 aa11.85□□□□□ -0.51
CMTM3-202ENST00000424011 TRBV10-1A0A0K0K1A3 114 aa11.85□□□□□ -0.51
CMTM3-202ENST00000424011 PYGO1Q9Y3Y4 419 aa11.84□□□□□ -0.51
CMTM3-202ENST00000424011 TEX49A0A1B0GTD5 131 aa11.83□□□□□ -0.51
CMTM3-202ENST00000424011 PLAC8L1A1L4L8 177 aa11.83□□□□□ -0.51
CMTM3-202ENST00000424011 CHCHD5Q9BSY4 110 aa11.83□□□□□ -0.51
CMTM3-202ENST00000424011 SLC25A29Q8N8R3 303 aa11.83□□□□□ -0.52
CMTM3-202ENST00000424011 FBN1P35555 2871 aaKnown RBP11.83□□□□□ -0.52
CMTM3-202ENST00000424011 LINC01620Q4KN68 170 aa11.82□□□□□ -0.52
CMTM3-202ENST00000424011 TMEM170BQ5T4T1 132 aa11.82□□□□□ -0.52
CMTM3-202ENST00000424011 WFDC9Q8NEX5 89 aa11.82□□□□□ -0.52
CMTM3-202ENST00000424011 IGLV4-3A0A075B6K6 122 aa11.82□□□□□ -0.52
CMTM3-202ENST00000424011 TRGV2A0A075B6R0 118 aa11.82□□□□□ -0.52
CMTM3-202ENST00000424011 K7EQD1 137 aa11.82□□□□□ -0.52
CMTM3-202ENST00000424011 IGHV3-33P01772 117 aa11.82□□□□□ -0.52
CMTM3-202ENST00000424011 ATXN8Q156A1 80 aa11.82□□□□□ -0.52
CMTM3-202ENST00000424011 C3orf56Q8N813 242 aa11.82□□□□□ -0.52
CMTM3-202ENST00000424011 SPATA3Q8NHX4 192 aa11.82□□□□□ -0.52
CMTM3-202ENST00000424011 HERVK_113P61574 105 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 94.9 ms