RNA–Protein interactions for RNA: ENST00000423214.1

COL18A1-205, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 5

Gene COL18A1, Length 839 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-205ENST00000423214 FAM231BA6NCW3 169 aa10.21□□□□□ -0.77
COL18A1-205ENST00000423214 H7C423 109 aa10.21□□□□□ -0.77
COL18A1-205ENST00000423214 RAB4AP20338 218 aa10.21□□□□□ -0.77
COL18A1-205ENST00000423214 PMCHP20382 165 aa10.21□□□□□ -0.77
COL18A1-205ENST00000423214 AMN1Q8IY45 258 aa10.21□□□□□ -0.77
COL18A1-205ENST00000423214 GVQW2A0A096LPI5 108 aaPredicted RBP10.2□□□□□ -0.78
COL18A1-205ENST00000423214 FGF6P10767 208 aa10.2□□□□□ -0.78
COL18A1-205ENST00000423214 RIGQ13278 110 aa10.2□□□□□ -0.78
COL18A1-205ENST00000423214 PRSS3P2Q8NHM4 247 aa10.2□□□□□ -0.78
COL18A1-205ENST00000423214 BTF3L4Q96K17 158 aa10.2□□□□□ -0.78
COL18A1-205ENST00000423214 PKIGQ9Y2B9 76 aa10.2□□□□□ -0.78
COL18A1-205ENST00000423214 TRBV6-5A0A0K0K1A5 114 aa10.19□□□□□ -0.78
COL18A1-205ENST00000423214 SMKR1H3BMG3 65 aa10.19□□□□□ -0.78
COL18A1-205ENST00000423214 I3L3M4 83 aa10.19□□□□□ -0.78
COL18A1-205ENST00000423214 ZNF25P17030 456 aaPredicted RBP10.19□□□□□ -0.78
COL18A1-205ENST00000423214 STPG4Q8N801 248 aa10.19□□□□□ -0.78
COL18A1-205ENST00000423214 TMEM101Q96IK0 257 aa10.19□□□□□ -0.78
COL18A1-205ENST00000423214 ST20Q9HBF5 79 aa10.19□□□□□ -0.78
COL18A1-205ENST00000423214 OR5A1Q8NGJ0 315 aa10.18□□□□□ -0.78
COL18A1-205ENST00000423214 NAT8BQ9UHF3 227 aa10.18□□□□□ -0.78
COL18A1-205ENST00000423214 XCL1P47992 114 aa10.17□□□□□ -0.78
COL18A1-205ENST00000423214 PRR3P79522 188 aaKnown RBP10.17□□□□□ -0.78
COL18A1-205ENST00000423214 FOXI1Q12951 378 aa10.17□□□□□ -0.78
COL18A1-205ENST00000423214 SMDT1Q9H4I9 107 aa10.17□□□□□ -0.78
COL18A1-205ENST00000423214 TMEM242Q9NWH2 141 aa10.17□□□□□ -0.78
COL18A1-205ENST00000423214 A0A096LNI7 61 aa10.16□□□□□ -0.78
COL18A1-205ENST00000423214 SMIM27A0A1W2PRY6 76 aa10.16□□□□□ -0.78
COL18A1-205ENST00000423214 TSHBP01222 138 aa10.16□□□□□ -0.78
COL18A1-205ENST00000423214 CAMPP49913 170 aa10.16□□□□□ -0.78
COL18A1-205ENST00000423214 MRAP2Q96G30 205 aa10.16□□□□□ -0.78
COL18A1-205ENST00000423214 LINC00474Q9P2X8 69 aa10.16□□□□□ -0.78
COL18A1-205ENST00000423214 TNXBP22105 4242 aa10.15□□□□□ -0.78
COL18A1-205ENST00000423214 CCL25O15444 150 aa10.15□□□□□ -0.78
COL18A1-205ENST00000423214 POLR2KP53803 58 aaKnown RBP10.15□□□□□ -0.78
COL18A1-205ENST00000423214 CARD19Q96LW7 228 aa10.15□□□□□ -0.78
COL18A1-205ENST00000423214 IGHV1-58A0A0C4DH39 117 aa10.14□□□□□ -0.79
COL18A1-205ENST00000423214 MRPL51Q4U2R6 128 aaKnown RBP10.14□□□□□ -0.79
COL18A1-205ENST00000423214 LINC00959A0A1B0GUT2 108 aa10.13□□□□□ -0.79
COL18A1-205ENST00000423214 ESDP10768 282 aa10.13□□□□□ -0.79
COL18A1-205ENST00000423214 SS18Q15532 418 aa10.13□□□□□ -0.79
COL18A1-205ENST00000423214 NRACQ8N912 160 aa10.13□□□□□ -0.79
COL18A1-205ENST00000423214 FAM104BQ5XKR9 115 aa10.12□□□□□ -0.79
COL18A1-205ENST00000423214 MRPL54Q6P161 138 aaKnown RBP10.12□□□□□ -0.79
COL18A1-205ENST00000423214 TRBV27A0A0K0K1C4 114 aa10.11□□□□□ -0.79
COL18A1-205ENST00000423214 ZNF561-AS1K7EIQ3 104 aa10.11□□□□□ -0.79
COL18A1-205ENST00000423214 VCYO14598 125 aa10.11□□□□□ -0.79
COL18A1-205ENST00000423214 LINC00526Q96FQ7 95 aa10.11□□□□□ -0.79
COL18A1-205ENST00000423214 C7orf77A4D0Y5 90 aa10.1□□□□□ -0.79
COL18A1-205ENST00000423214 RAB14P61106 215 aa10.1□□□□□ -0.79
COL18A1-205ENST00000423214 SUMO2P61956 95 aaKnown RBP10.1□□□□□ -0.79
COL18A1-205ENST00000423214 REG3GQ6UW15 175 aa10.1□□□□□ -0.79
COL18A1-205ENST00000423214 LINC01600Q96MT4 127 aa10.1□□□□□ -0.79
COL18A1-205ENST00000423214 FCER1GP30273 86 aa10.09□□□□□ -0.79
COL18A1-205ENST00000423214 SYCNQ0VAF6 134 aa10.09□□□□□ -0.79
COL18A1-205ENST00000423214 MRPL52Q86TS9 123 aaKnown RBP10.09□□□□□ -0.79
COL18A1-205ENST00000423214 PPP1R17O96001 155 aa10.08□□□□□ -0.8
COL18A1-205ENST00000423214 CKS2P33552 79 aa10.08□□□□□ -0.8
COL18A1-205ENST00000423214 CD164L2Q6UWJ8 174 aa10.08□□□□□ -0.8
COL18A1-205ENST00000423214 CDC42SE2Q9NRR3 84 aa10.08□□□□□ -0.8
COL18A1-205ENST00000423214 A0A1B0GW15 77 aa10.07□□□□□ -0.8
COL18A1-205ENST00000423214 MALP21145 153 aa10.07□□□□□ -0.8
COL18A1-205ENST00000423214 HBBP68871 147 aa10.07□□□□□ -0.8
COL18A1-205ENST00000423214 SPINK6Q6UWN8 80 aa10.07□□□□□ -0.8
COL18A1-205ENST00000423214 ZNF664Q8N3J9 261 aa10.07□□□□□ -0.8
COL18A1-205ENST00000423214 A0A0J9YXV3 536 aa10.06□□□□□ -0.8
COL18A1-205ENST00000423214 LOC107984640A0A0U1RRK4 108 aa10.06□□□□□ -0.8
COL18A1-205ENST00000423214 A0A1B0GXF2 115 aa10.06□□□□□ -0.8
COL18A1-205ENST00000423214 LINC00862A6NCI5 91 aa10.06□□□□□ -0.8
COL18A1-205ENST00000423214 TNFRSF6BO95407 300 aa10.06□□□□□ -0.8
COL18A1-205ENST00000423214 SMAGPQ0VAQ4 97 aa10.06□□□□□ -0.8
COL18A1-205ENST00000423214 Q6ZRP5 223 aa10.06□□□□□ -0.8
COL18A1-205ENST00000423214 KIR2DL4Q99706 377 aa10.06□□□□□ -0.8
COL18A1-205ENST00000423214 D6R8Y8 96 aa10.05□□□□□ -0.8
COL18A1-205ENST00000423214 F8W036 122 aa10.05□□□□□ -0.8
COL18A1-205ENST00000423214 PPP1R2P9O14990 202 aa10.05□□□□□ -0.8
COL18A1-205ENST00000423214 S100A8P05109 93 aa10.05□□□□□ -0.8
COL18A1-205ENST00000423214 PTTG1IPP53801 180 aa10.05□□□□□ -0.8
COL18A1-205ENST00000423214 LRP2P98164 4655 aa10.05□□□□□ -0.8
COL18A1-205ENST00000423214 GAGE2BQ13066 116 aa10.05□□□□□ -0.8
COL18A1-205ENST00000423214 RNASE13Q5GAN3 156 aaKnown RBP10.05□□□□□ -0.8
COL18A1-205ENST00000423214 TRBV24-1A0A075B6N3 115 aa10.04□□□□□ -0.8
COL18A1-205ENST00000423214 C1orf196B1AJZ1 125 aa10.04□□□□□ -0.8
COL18A1-205ENST00000423214 COX7A2LO14548 114 aa10.04□□□□□ -0.8
COL18A1-205ENST00000423214 C20orf78Q9BR46 151 aa10.04□□□□□ -0.8
COL18A1-205ENST00000423214 UBE2D4Q9Y2X8 147 aa10.04□□□□□ -0.8
COL18A1-205ENST00000423214 IGLV4-69A0A075B6H9 119 aa10.03□□□□□ -0.8
COL18A1-205ENST00000423214 NPYP01303 97 aa10.03□□□□□ -0.8
COL18A1-205ENST00000423214 IFITM2Q01629 132 aa10.03□□□□□ -0.8
COL18A1-205ENST00000423214 CAMK2N2Q96S95 79 aa10.03□□□□□ -0.8
COL18A1-205ENST00000423214 PNRC1Q12796 327 aaPredicted RBP10.02□□□□□ -0.81
COL18A1-205ENST00000423214 ODF1Q14990 250 aa10.02□□□□□ -0.81
COL18A1-205ENST00000423214 CLLU1Q5K131 121 aa10.02□□□□□ -0.81
COL18A1-205ENST00000423214 TRAV13-1A0A0B4J241 112 aa10.01□□□□□ -0.81
COL18A1-205ENST00000423214 TCAPO15273 167 aa10.01□□□□□ -0.81
COL18A1-205ENST00000423214 MT-ND4LP03901 98 aa10.01□□□□□ -0.81
COL18A1-205ENST00000423214 RPL39P62891 51 aaKnown RBP10.01□□□□□ -0.81
COL18A1-205ENST00000423214 RPL18AQ02543 176 aaKnown RBP10.01□□□□□ -0.81
COL18A1-205ENST00000423214 ANAPC16Q96DE5 110 aa10.01□□□□□ -0.81
COL18A1-205ENST00000423214 SMIM2Q9BVW6 85 aa10.01□□□□□ -0.81
COL18A1-205ENST00000423214 CSDC2Q9Y534 153 aaKnown RBP10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms