RNA–Protein interactions for RNA: ENST00000423161.3

SREBF1-206, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 3

Gene SREBF1, Length 1,058 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-206ENST00000423161 TMEM191AQ9H0A3 160 aa11.64□□□□□ -0.55
SREBF1-206ENST00000423161 A0A096LNI7 61 aa11.63□□□□□ -0.55
SREBF1-206ENST00000423161 TSKUQ8WUA8 353 aa11.63□□□□□ -0.55
SREBF1-206ENST00000423161 EIF5A2Q9GZV4 153 aaKnown RBP11.63□□□□□ -0.55
SREBF1-206ENST00000423161 LINC01551Q86U37 167 aa11.62□□□□□ -0.55
SREBF1-206ENST00000423161 FAM210AQ96ND0 272 aa11.62□□□□□ -0.55
SREBF1-206ENST00000423161 IGHV1-58A0A0C4DH39 117 aa11.61□□□□□ -0.55
SREBF1-206ENST00000423161 POLR2KP53803 58 aaKnown RBP11.61□□□□□ -0.55
SREBF1-206ENST00000423161 SS18Q15532 418 aa11.61□□□□□ -0.55
SREBF1-206ENST00000423161 MRPL52Q86TS9 123 aaKnown RBP11.61□□□□□ -0.55
SREBF1-206ENST00000423161 LINC00526Q96FQ7 95 aa11.61□□□□□ -0.55
SREBF1-206ENST00000423161 hCG_2014768A0A024R1R8 64 aa11.6□□□□□ -0.55
SREBF1-206ENST00000423161 TRBV27A0A0K0K1C4 114 aa11.6□□□□□ -0.55
SREBF1-206ENST00000423161 C7orf77A4D0Y5 90 aa11.6□□□□□ -0.55
SREBF1-206ENST00000423161 RAB4AP20338 218 aa11.6□□□□□ -0.55
SREBF1-206ENST00000423161 AMN1Q8IY45 258 aa11.6□□□□□ -0.55
SREBF1-206ENST00000423161 CARD19Q96LW7 228 aa11.6□□□□□ -0.55
SREBF1-206ENST00000423161 OSTCQ9NRP0 149 aa11.6□□□□□ -0.55
SREBF1-206ENST00000423161 CDC42SE2Q9NRR3 84 aa11.6□□□□□ -0.55
SREBF1-206ENST00000423161 PKIGQ9Y2B9 76 aa11.6□□□□□ -0.55
SREBF1-206ENST00000423161 ZNF727A8MUV8 499 aa11.59□□□□□ -0.55
SREBF1-206ENST00000423161 PRR3P79522 188 aaKnown RBP11.59□□□□□ -0.55
SREBF1-206ENST00000423161 LINC00474Q9P2X8 69 aa11.59□□□□□ -0.55
SREBF1-206ENST00000423161 CD164L2Q6UWJ8 174 aa11.58□□□□□ -0.56
SREBF1-206ENST00000423161 ZNF664Q8N3J9 261 aa11.58□□□□□ -0.56
SREBF1-206ENST00000423161 UBR4Q5T4S7 5183 aa11.57□□□□□ -0.56
SREBF1-206ENST00000423161 SMKR1H3BMG3 65 aa11.57□□□□□ -0.56
SREBF1-206ENST00000423161 ZNF561-AS1K7EIQ3 104 aa11.57□□□□□ -0.56
SREBF1-206ENST00000423161 SRP19P09132 144 aaKnown RBP11.57□□□□□ -0.56
SREBF1-206ENST00000423161 FCER1GP30273 86 aa11.56□□□□□ -0.56
SREBF1-206ENST00000423161 SYCNQ0VAF6 134 aa11.56□□□□□ -0.56
SREBF1-206ENST00000423161 RIGQ13278 110 aa11.56□□□□□ -0.56
SREBF1-206ENST00000423161 V9GYV3 84 aa11.56□□□□□ -0.56
SREBF1-206ENST00000423161 VCYO14598 125 aa11.55□□□□□ -0.56
SREBF1-206ENST00000423161 NUP35Q8NFH5 326 aa11.55□□□□□ -0.56
SREBF1-206ENST00000423161 CAMPP49913 170 aa11.54□□□□□ -0.56
SREBF1-206ENST00000423161 C1orf196B1AJZ1 125 aa11.53□□□□□ -0.56
SREBF1-206ENST00000423161 PPP1R17O96001 155 aa11.53□□□□□ -0.56
SREBF1-206ENST00000423161 MALP21145 153 aa11.53□□□□□ -0.56
SREBF1-206ENST00000423161 SUMO2P61956 95 aaKnown RBP11.53□□□□□ -0.56
SREBF1-206ENST00000423161 SMAGPQ0VAQ4 97 aa11.53□□□□□ -0.56
SREBF1-206ENST00000423161 NRACQ8N912 160 aa11.53□□□□□ -0.56
SREBF1-206ENST00000423161 ISOC2Q96AB3 205 aa11.53□□□□□ -0.56
SREBF1-206ENST00000423161 RNASE13Q5GAN3 156 aaKnown RBP11.52□□□□□ -0.57
SREBF1-206ENST00000423161 LINC01600Q96MT4 127 aa11.52□□□□□ -0.57
SREBF1-206ENST00000423161 KIR2DL4Q99706 377 aa11.52□□□□□ -0.57
SREBF1-206ENST00000423161 UBE2D4Q9Y2X8 147 aa11.52□□□□□ -0.57
SREBF1-206ENST00000423161 CSDC2Q9Y534 153 aaKnown RBP11.52□□□□□ -0.57
SREBF1-206ENST00000423161 IGLV4-69A0A075B6H9 119 aa11.51□□□□□ -0.57
SREBF1-206ENST00000423161 COX7A2LO14548 114 aa11.51□□□□□ -0.57
SREBF1-206ENST00000423161 TMEM241Q24JQ0 296 aa11.51□□□□□ -0.57
SREBF1-206ENST00000423161 NAT8BQ9UHF3 227 aa11.51□□□□□ -0.57
SREBF1-206ENST00000423161 TNXBP22105 4242 aa11.5□□□□□ -0.57
SREBF1-206ENST00000423161 LOC107984640A0A0U1RRK4 108 aa11.5□□□□□ -0.57
SREBF1-206ENST00000423161 PPP1R2P9O14990 202 aa11.5□□□□□ -0.57
SREBF1-206ENST00000423161 PTTG1IPP53801 180 aa11.5□□□□□ -0.57
SREBF1-206ENST00000423161 TRAV13-1A0A0B4J241 112 aa11.49□□□□□ -0.57
SREBF1-206ENST00000423161 RPL23P62829 140 aaKnown RBP11.49□□□□□ -0.57
SREBF1-206ENST00000423161 GAGE2BQ13066 116 aa11.49□□□□□ -0.57
SREBF1-206ENST00000423161 ADIRFQ15847 76 aa11.49□□□□□ -0.57
SREBF1-206ENST00000423161 MRPL51Q4U2R6 128 aaKnown RBP11.49□□□□□ -0.57
SREBF1-206ENST00000423161 FAM74A3Q4VXF1 159 aa11.49□□□□□ -0.57
SREBF1-206ENST00000423161 FAM104BQ5XKR9 115 aa11.49□□□□□ -0.57
SREBF1-206ENST00000423161 SPINK6Q6UWN8 80 aa11.49□□□□□ -0.57
SREBF1-206ENST00000423161 Q6ZUT4 128 aa11.49□□□□□ -0.57
SREBF1-206ENST00000423161 Q6ZRP5 223 aa11.48□□□□□ -0.57
SREBF1-206ENST00000423161 TMEM18Q96B42 140 aa11.48□□□□□ -0.57
SREBF1-206ENST00000423161 CAMK2N2Q96S95 79 aa11.48□□□□□ -0.57
SREBF1-206ENST00000423161 REG3GQ6UW15 175 aa11.47□□□□□ -0.57
SREBF1-206ENST00000423161 C5orf38Q86SI9 138 aa11.47□□□□□ -0.57
SREBF1-206ENST00000423161 TIMM21Q9BVV7 248 aa11.47□□□□□ -0.57
SREBF1-206ENST00000423161 A0A0J9YXV3 536 aa11.46□□□□□ -0.57
SREBF1-206ENST00000423161 SMIM27A0A1W2PRY6 76 aa11.46□□□□□ -0.57
SREBF1-206ENST00000423161 NAT8Q9UHE5 227 aa11.46□□□□□ -0.57
SREBF1-206ENST00000423161 LINC00862A6NCI5 91 aa11.45□□□□□ -0.58
SREBF1-206ENST00000423161 APOMO95445 188 aa11.45□□□□□ -0.58
SREBF1-206ENST00000423161 C2orf48Q96LS8 159 aa11.45□□□□□ -0.58
SREBF1-206ENST00000423161 C20orf78Q9BR46 151 aa11.45□□□□□ -0.58
SREBF1-206ENST00000423161 A0A1B0GW15 77 aa11.44□□□□□ -0.58
SREBF1-206ENST00000423161 CKS2P33552 79 aa11.44□□□□□ -0.58
SREBF1-206ENST00000423161 SRSF9Q13242 221 aaKnown RBP eCLIP11.44□□□□□ -0.58
SREBF1-206ENST00000423161 ODF1Q14990 250 aa11.44□□□□□ -0.58
SREBF1-206ENST00000423161 TRBV24-1A0A075B6N3 115 aa11.43□□□□□ -0.58
SREBF1-206ENST00000423161 C9JQL5 133 aa11.43□□□□□ -0.58
SREBF1-206ENST00000423161 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.43□□□□□ -0.58
SREBF1-206ENST00000423161 TCAPO15273 167 aa11.43□□□□□ -0.58
SREBF1-206ENST00000423161 RPL39P62891 51 aaKnown RBP11.43□□□□□ -0.58
SREBF1-206ENST00000423161 RPL32P62910 135 aaKnown RBP11.43□□□□□ -0.58
SREBF1-206ENST00000423161 RPL18AQ02543 176 aaKnown RBP11.43□□□□□ -0.58
SREBF1-206ENST00000423161 SPAG11BQ08648 103 aa11.43□□□□□ -0.58
SREBF1-206ENST00000423161 A0A1W2PNN7 141 aa11.42□□□□□ -0.58
SREBF1-206ENST00000423161 TNFRSF6BO95407 300 aa11.42□□□□□ -0.58
SREBF1-206ENST00000423161 SMIM2Q9BVW6 85 aa11.42□□□□□ -0.58
SREBF1-206ENST00000423161 KRTAP10-8P60410 259 aa11.41□□□□□ -0.58
SREBF1-206ENST00000423161 C9orf116Q5BN46 136 aaPredicted RBP11.41□□□□□ -0.58
SREBF1-206ENST00000423161 MRPL54Q6P161 138 aaKnown RBP11.41□□□□□ -0.58
SREBF1-206ENST00000423161 OR10D4PQ8NGN7 298 aa11.41□□□□□ -0.58
SREBF1-206ENST00000423161 D6R8Y8 96 aa11.4□□□□□ -0.58
SREBF1-206ENST00000423161 SRSF3P84103 164 aaKnown RBP11.4□□□□□ -0.58
SREBF1-206ENST00000423161 PEA15Q15121 130 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms