RNA–Protein interactions for RNA: ENST00000421517.5

FAM3A-209, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 3

Gene FAM3A, Length 853 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-209ENST00000421517 KRTAP17-1Q9BYP8 105 aa9.64□□□□□ -0.87
FAM3A-209ENST00000421517 FAT1Q14517 4588 aa9.64□□□□□ -0.87
FAM3A-209ENST00000421517 TNFRSF6BO95407 300 aa9.63□□□□□ -0.87
FAM3A-209ENST00000421517 PRSS1P07477 247 aa9.63□□□□□ -0.87
FAM3A-209ENST00000421517 FCER1GP30273 86 aa9.63□□□□□ -0.87
FAM3A-209ENST00000421517 MRPL54Q6P161 138 aaKnown RBP9.63□□□□□ -0.87
FAM3A-209ENST00000421517 C9orf163Q8N9P6 203 aa9.63□□□□□ -0.87
FAM3A-209ENST00000421517 CTDSP1Q9GZU7 261 aa9.63□□□□□ -0.87
FAM3A-209ENST00000421517 CDC42SE2Q9NRR3 84 aa9.63□□□□□ -0.87
FAM3A-209ENST00000421517 IGLV10-54A0A075B6I4 117 aa9.62□□□□□ -0.87
FAM3A-209ENST00000421517 TRAV9-1A0A075B6T8 112 aa9.62□□□□□ -0.87
FAM3A-209ENST00000421517 EPM2AB3EWF7 344 aa9.62□□□□□ -0.87
FAM3A-209ENST00000421517 SMKR1H3BMG3 65 aa9.62□□□□□ -0.87
FAM3A-209ENST00000421517 ORMDL3Q8N138 153 aa9.62□□□□□ -0.87
FAM3A-209ENST00000421517 DEFB104AQ8WTQ1 72 aa9.62□□□□□ -0.87
FAM3A-209ENST00000421517 KRTAP4-5Q9BYR2 181 aa9.62□□□□□ -0.87
FAM3A-209ENST00000421517 D6R8Y8 96 aa9.61□□□□□ -0.87
FAM3A-209ENST00000421517 ZNF664Q8N3J9 261 aa9.61□□□□□ -0.87
FAM3A-209ENST00000421517 SMIM2Q9BVW6 85 aa9.61□□□□□ -0.87
FAM3A-209ENST00000421517 FAM30AQ9NZY2 134 aa9.61□□□□□ -0.87
FAM3A-209ENST00000421517 CHCHD10Q8WYQ3 142 aaPredicted RBP9.6□□□□□ -0.87
FAM3A-209ENST00000421517 UBE2D4Q9Y2X8 147 aa9.6□□□□□ -0.87
FAM3A-209ENST00000421517 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.59□□□□□ -0.87
FAM3A-209ENST00000421517 LINC00959A0A1B0GUT2 108 aa9.59□□□□□ -0.87
FAM3A-209ENST00000421517 FAM229AH3BQW9 127 aa9.59□□□□□ -0.87
FAM3A-209ENST00000421517 K7EMI3 77 aa9.59□□□□□ -0.87
FAM3A-209ENST00000421517 ADCYAP1P18509 176 aa9.59□□□□□ -0.87
FAM3A-209ENST00000421517 TMEM136Q6ZRR5 245 aa9.59□□□□□ -0.87
FAM3A-209ENST00000421517 AP5S1Q9NUS5 200 aa9.59□□□□□ -0.87
FAM3A-209ENST00000421517 GAGE12HA6NDE8 117 aa9.58□□□□□ -0.88
FAM3A-209ENST00000421517 SS18Q15532 418 aa9.58□□□□□ -0.88
FAM3A-209ENST00000421517 C10orf91Q5T1B1 145 aa9.58□□□□□ -0.88
FAM3A-209ENST00000421517 CHAC1Q9BUX1 264 aa9.58□□□□□ -0.88
FAM3A-209ENST00000421517 GVQW2A0A096LPI5 108 aaPredicted RBP9.57□□□□□ -0.88
FAM3A-209ENST00000421517 C1orf196B1AJZ1 125 aa9.57□□□□□ -0.88
FAM3A-209ENST00000421517 NPYP01303 97 aa9.57□□□□□ -0.88
FAM3A-209ENST00000421517 FOXI1Q12951 378 aa9.57□□□□□ -0.88
FAM3A-209ENST00000421517 CD164L2Q6UWJ8 174 aa9.57□□□□□ -0.88
FAM3A-209ENST00000421517 PRELID3AQ96N28 172 aa9.57□□□□□ -0.88
FAM3A-209ENST00000421517 SPANXA1Q9NS26 97 aa9.57□□□□□ -0.88
FAM3A-209ENST00000421517 hDV102S1A0JD36 115 aa9.56□□□□□ -0.88
FAM3A-209ENST00000421517 MRPS36P82909 103 aaKnown RBP9.56□□□□□ -0.88
FAM3A-209ENST00000421517 Q5VSD8 79 aa9.56□□□□□ -0.88
FAM3A-209ENST00000421517 C15orf56Q8N910 161 aa9.56□□□□□ -0.88
FAM3A-209ENST00000421517 NDUFA5Q16718 116 aa9.55□□□□□ -0.88
FAM3A-209ENST00000421517 COX19Q49B96 90 aa9.55□□□□□ -0.88
FAM3A-209ENST00000421517 SDIM1Q6ZPB5 146 aa9.55□□□□□ -0.88
FAM3A-209ENST00000421517 CARHSP1Q9Y2V2 147 aaKnown RBP9.55□□□□□ -0.88
FAM3A-209ENST00000421517 PYGO1Q9Y3Y4 419 aa9.55□□□□□ -0.88
FAM3A-209ENST00000421517 VPS13BQ7Z7G8 4022 aa9.54□□□□□ -0.88
FAM3A-209ENST00000421517 IGHV1-58A0A0C4DH39 117 aa9.54□□□□□ -0.88
FAM3A-209ENST00000421517 NPSP0C0P6 89 aa9.54□□□□□ -0.88
FAM3A-209ENST00000421517 RAB5AP20339 215 aa9.54□□□□□ -0.88
FAM3A-209ENST00000421517 CIRBPQ14011 172 aaKnown RBP9.54□□□□□ -0.88
FAM3A-209ENST00000421517 SCXQ7RTU7 201 aa9.54□□□□□ -0.88
FAM3A-209ENST00000421517 COMMD7Q86VX2 200 aa9.54□□□□□ -0.88
FAM3A-209ENST00000421517 MAP1LC3AQ9H492 121 aa9.54□□□□□ -0.88
FAM3A-209ENST00000421517 PKIGQ9Y2B9 76 aa9.54□□□□□ -0.88
FAM3A-209ENST00000421517 IGHV3-64A0A075B6Q5 118 aa9.53□□□□□ -0.88
FAM3A-209ENST00000421517 IGKV3OR2-268A0A0C4DH90 116 aa9.53□□□□□ -0.88
FAM3A-209ENST00000421517 RHEBQ15382 184 aa9.53□□□□□ -0.88
FAM3A-209ENST00000421517 LINC01620Q4KN68 170 aa9.53□□□□□ -0.88
FAM3A-209ENST00000421517 SLPIP03973 132 aa9.52□□□□□ -0.89
FAM3A-209ENST00000421517 S100PP25815 95 aa9.52□□□□□ -0.89
FAM3A-209ENST00000421517 G0S2P27469 103 aa9.52□□□□□ -0.89
FAM3A-209ENST00000421517 XCL1P47992 114 aa9.52□□□□□ -0.89
FAM3A-209ENST00000421517 Q8N8P6 123 aa9.52□□□□□ -0.89
FAM3A-209ENST00000421517 CIRBP-AS1Q8TBR5 109 aa9.52□□□□□ -0.89
FAM3A-209ENST00000421517 SMR3BP02814 79 aaPredicted RBP9.51□□□□□ -0.89
FAM3A-209ENST00000421517 PLA2G1BP04054 148 aaKnown RBP9.51□□□□□ -0.89
FAM3A-209ENST00000421517 ORMDL2Q53FV1 153 aa9.51□□□□□ -0.89
FAM3A-209ENST00000421517 GNB1LQ9BYB4 327 aa9.51□□□□□ -0.89
FAM3A-209ENST00000421517 NXT2Q9NPJ8 142 aaKnown RBP9.51□□□□□ -0.89
FAM3A-209ENST00000421517 IFI27P40305 119 aaPredicted RBP9.5□□□□□ -0.89
FAM3A-209ENST00000421517 FAM104AQ969W3 186 aa9.5□□□□□ -0.89
FAM3A-209ENST00000421517 MT-ND6P03923 174 aa9.49□□□□□ -0.89
FAM3A-209ENST00000421517 RPL39P62891 51 aaKnown RBP9.49□□□□□ -0.89
FAM3A-209ENST00000421517 Q6ZUT4 128 aa9.49□□□□□ -0.89
FAM3A-209ENST00000421517 LINC01549A6NIU2 74 aa9.48□□□□□ -0.89
FAM3A-209ENST00000421517 F8WDY8 70 aa9.48□□□□□ -0.89
FAM3A-209ENST00000421517 COX7A2LO14548 114 aa9.48□□□□□ -0.89
FAM3A-209ENST00000421517 INAFM2P0DMQ5 153 aa9.48□□□□□ -0.89
FAM3A-209ENST00000421517 LINC00528Q8N1L1 170 aa9.48□□□□□ -0.89
FAM3A-209ENST00000421517 ZNF561-AS1K7EIQ3 104 aa9.47□□□□□ -0.89
FAM3A-209ENST00000421517 APOMO95445 188 aa9.47□□□□□ -0.89
FAM3A-209ENST00000421517 HAMPP81172 84 aa9.47□□□□□ -0.89
FAM3A-209ENST00000421517 CYSLTR1Q9Y271 337 aa9.47□□□□□ -0.89
FAM3A-209ENST00000421517 TRAV13-1A0A0B4J241 112 aa9.46□□□□□ -0.9
FAM3A-209ENST00000421517 IGHV3OR16-9A0A0B4J2B5 98 aa9.46□□□□□ -0.9
FAM3A-209ENST00000421517 C2orf48Q96LS8 159 aa9.46□□□□□ -0.9
FAM3A-209ENST00000421517 LINC00474Q9P2X8 69 aa9.46□□□□□ -0.9
FAM3A-209ENST00000421517 SRRM2Q9UQ35 2752 aaKnown RBP9.46□□□□□ -0.9
FAM3A-209ENST00000421517 LINC01546A6NGU7 62 aa9.45□□□□□ -0.9
FAM3A-209ENST00000421517 MALP21145 153 aa9.45□□□□□ -0.9
FAM3A-209ENST00000421517 HIGD2BQ4VC39 106 aa9.45□□□□□ -0.9
FAM3A-209ENST00000421517 OR10D4PQ8NGN7 298 aa9.45□□□□□ -0.9
FAM3A-209ENST00000421517 SPACA4Q8TDM5 124 aa9.45□□□□□ -0.9
FAM3A-209ENST00000421517 TMEM141Q96I45 108 aa9.45□□□□□ -0.9
FAM3A-209ENST00000421517 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.45□□□□□ -0.9
FAM3A-209ENST00000421517 IGLV4-3A0A075B6K6 122 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.3 ms