RNA–Protein interactions for RNA: ENST00000420329.6

CRTC3-202, Transcript of CREB regulated transcription coactivator 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene CRTC3, Length 5,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRTC3-202ENST00000420329 PRM2P04554 102 aa12.18□□□□□ -0.46
CRTC3-202ENST00000420329 RAI1Q7Z5J4 1906 aaPredicted RBP12.18□□□□□ -0.46
CRTC3-202ENST00000420329 DNAJC9-AS1A6NH13 148 aa12.18□□□□□ -0.46
CRTC3-202ENST00000420329 IGKV2D-24A0A075B6R9 120 aa12.18□□□□□ -0.46
CRTC3-202ENST00000420329 XGP55808 180 aa12.18□□□□□ -0.46
CRTC3-202ENST00000420329 CAMK2N2Q96S95 79 aa12.18□□□□□ -0.46
CRTC3-202ENST00000420329 IGLV2-18A0A075B6J9 118 aa12.18□□□□□ -0.46
CRTC3-202ENST00000420329 PRORYQ9H606 182 aa12.18□□□□□ -0.46
CRTC3-202ENST00000420329 SPART-AS1P0CW21 52 aa12.17□□□□□ -0.46
CRTC3-202ENST00000420329 C9orf66Q5T8R8 295 aa12.17□□□□□ -0.46
CRTC3-202ENST00000420329 CITED1Q99966 193 aa12.17□□□□□ -0.46
CRTC3-202ENST00000420329 EDN2P20800 178 aa12.17□□□□□ -0.46
CRTC3-202ENST00000420329 DEFB135Q30KP9 77 aa12.17□□□□□ -0.46
CRTC3-202ENST00000420329 CHD7Q9P2D1 2997 aa12.17□□□□□ -0.46
CRTC3-202ENST00000420329 PRO0255Q9UI72 69 aa12.17□□□□□ -0.46
CRTC3-202ENST00000420329 J3QKU1 62 aa12.16□□□□□ -0.46
CRTC3-202ENST00000420329 IGHV4-31P0DP07 118 aa12.16□□□□□ -0.46
CRTC3-202ENST00000420329 CXCL5P42830 114 aa12.16□□□□□ -0.46
CRTC3-202ENST00000420329 SPAG11BQ08648 103 aa12.16□□□□□ -0.46
CRTC3-202ENST00000420329 COL4A2P08572 1712 aa12.16□□□□□ -0.46
CRTC3-202ENST00000420329 C5orf42Q9H799 3197 aa12.15□□□□□ -0.46
CRTC3-202ENST00000420329 UBE2D1P51668 147 aa12.15□□□□□ -0.46
CRTC3-202ENST00000420329 IGLV4-69A0A075B6H9 119 aa12.15□□□□□ -0.46
CRTC3-202ENST00000420329 C1orf43Q9BWL3 253 aa12.15□□□□□ -0.46
CRTC3-202ENST00000420329 UBE2D4Q9Y2X8 147 aa12.15□□□□□ -0.46
CRTC3-202ENST00000420329 DEFB105AQ8NG35 78 aa12.14□□□□□ -0.47
CRTC3-202ENST00000420329 TIMM17BO60830 172 aa12.13□□□□□ -0.47
CRTC3-202ENST00000420329 A0A1W2PPR1 153 aa12.13□□□□□ -0.47
CRTC3-202ENST00000420329 TSPEAR-AS2P59090 65 aa12.13□□□□□ -0.47
CRTC3-202ENST00000420329 KLK12Q9UKR0 248 aa12.13□□□□□ -0.47
CRTC3-202ENST00000420329 TMEM256-PLSCR3K7ERE1 68 aa12.13□□□□□ -0.47
CRTC3-202ENST00000420329 ZNF702PQ9H963 129 aa12.13□□□□□ -0.47
CRTC3-202ENST00000420329 LST1O00453 97 aa12.12□□□□□ -0.47
CRTC3-202ENST00000420329 MRPS36P82909 103 aaKnown RBP12.12□□□□□ -0.47
CRTC3-202ENST00000420329 C18orf65Q6ZTR6 163 aa12.11□□□□□ -0.47
CRTC3-202ENST00000420329 RBM3P98179 157 aaKnown RBP12.11□□□□□ -0.47
CRTC3-202ENST00000420329 AVPP01185 164 aa12.11□□□□□ -0.47
CRTC3-202ENST00000420329 HTTP42858 3142 aa12.1□□□□□ -0.47
CRTC3-202ENST00000420329 Q6ZSV7 163 aa12.1□□□□□ -0.47
CRTC3-202ENST00000420329 POM121L12Q8N7R1 296 aa12.1□□□□□ -0.47
CRTC3-202ENST00000420329 CRIP2P52943 208 aaPredicted RBP12.1□□□□□ -0.47
CRTC3-202ENST00000420329 LINC00269Q8N2A0 174 aa12.09□□□□□ -0.47
CRTC3-202ENST00000420329 IBA57-AS1B1ANH7 110 aa12.09□□□□□ -0.47
CRTC3-202ENST00000420329 hADV29S1A0JD25 119 aa12.09□□□□□ -0.47
CRTC3-202ENST00000420329 SDIM1Q6ZPB5 146 aa12.09□□□□□ -0.47
CRTC3-202ENST00000420329 AGRNO00468 2067 aa12.09□□□□□ -0.47
CRTC3-202ENST00000420329 J3KT08 172 aa12.09□□□□□ -0.47
CRTC3-202ENST00000420329 H7C423 109 aa12.08□□□□□ -0.48
CRTC3-202ENST00000420329 SLPIP03973 132 aa12.08□□□□□ -0.48
CRTC3-202ENST00000420329 TRBV6-8A0A0A6YYG3 113 aa12.08□□□□□ -0.48
CRTC3-202ENST00000420329 UBE2D3P61077 147 aa12.08□□□□□ -0.48
CRTC3-202ENST00000420329 UBE2D2P62837 147 aa12.08□□□□□ -0.48
CRTC3-202ENST00000420329 DIRC1Q969H9 104 aa12.08□□□□□ -0.48
CRTC3-202ENST00000420329 CHD8Q9HCK8 2581 aa12.07□□□□□ -0.48
CRTC3-202ENST00000420329 ABCA12Q86UK0 2595 aa12.07□□□□□ -0.48
CRTC3-202ENST00000420329 TRBV6-4A0A1B0GX49 114 aa12.07□□□□□ -0.48
CRTC3-202ENST00000420329 RPL18AQ02543 176 aaKnown RBP12.07□□□□□ -0.48
CRTC3-202ENST00000420329 RMI2Q96E14 147 aa12.07□□□□□ -0.48
CRTC3-202ENST00000420329 A0A0C4DFX4 3053 aa12.06□□□□□ -0.48
CRTC3-202ENST00000420329 FAM222AQ5U5X8 452 aa12.05□□□□□ -0.48
CRTC3-202ENST00000420329 FUSP35637 526 aaKnown RBP eCLIP12.05□□□□□ -0.48
CRTC3-202ENST00000420329 ETDCA0A1B0GVM5 59 aa12.05□□□□□ -0.48
CRTC3-202ENST00000420329 REG3AQ06141 175 aa12.05□□□□□ -0.48
CRTC3-202ENST00000420329 UQCRQO14949 82 aa12.05□□□□□ -0.48
CRTC3-202ENST00000420329 WFDC11Q8NEX6 87 aa12.05□□□□□ -0.48
CRTC3-202ENST00000420329 CDK2AP2O75956 126 aa12.04□□□□□ -0.48
CRTC3-202ENST00000420329 ZNF580Q9UK33 172 aa12.04□□□□□ -0.48
CRTC3-202ENST00000420329 CHCHD10Q8WYQ3 142 aaPredicted RBP12.04□□□□□ -0.48
CRTC3-202ENST00000420329 H3BQ85 93 aa12.04□□□□□ -0.48
CRTC3-202ENST00000420329 LRRC75A-AS1Q8N1F1 130 aa12.04□□□□□ -0.48
CRTC3-202ENST00000420329 TRAV23DV6A0A075B6W5 121 aa12.04□□□□□ -0.48
CRTC3-202ENST00000420329 PRRC2AP48634 2157 aaKnown RBP12.03□□□□□ -0.48
CRTC3-202ENST00000420329 IGHV4-28A0A0C4DH34 117 aa12.03□□□□□ -0.48
CRTC3-202ENST00000420329 NREPQ16612 68 aa12.03□□□□□ -0.48
CRTC3-202ENST00000420329 LOC100131303A0A0U1RQF7 123 aa12.03□□□□□ -0.48
CRTC3-202ENST00000420329 UBE2BP63146 152 aa12.03□□□□□ -0.48
CRTC3-202ENST00000420329 SPTBN4Q9H254 2564 aa12.02□□□□□ -0.48
CRTC3-202ENST00000420329 LINC00242Q5T6M2 205 aa12.02□□□□□ -0.49
CRTC3-202ENST00000420329 WFDC10AQ9H1F0 79 aa12.02□□□□□ -0.49
CRTC3-202ENST00000420329 PTPRBP23467 1997 aa12.01□□□□□ -0.49
CRTC3-202ENST00000420329 NDUFA7O95182 113 aa12.01□□□□□ -0.49
CRTC3-202ENST00000420329 CCDC179H3BU77 68 aa12□□□□□ -0.49
CRTC3-202ENST00000420329 LINC01546A6NGU7 62 aa12□□□□□ -0.49
CRTC3-202ENST00000420329 BRI3O95415 125 aa11.99□□□□□ -0.49
CRTC3-202ENST00000420329 CDC42SE2Q9NRR3 84 aa11.99□□□□□ -0.49
CRTC3-202ENST00000420329 COX7BP24311 80 aa11.99□□□□□ -0.49
CRTC3-202ENST00000420329 ADAMTSL4-AS1Q5T5F5 129 aa11.99□□□□□ -0.49
CRTC3-202ENST00000420329 CHCHD7Q9BUK0 85 aa11.99□□□□□ -0.49
CRTC3-202ENST00000420329 PDE6GP18545 87 aa11.99□□□□□ -0.49
CRTC3-202ENST00000420329 UPK3BQ9BT76 320 aa11.99□□□□□ -0.49
CRTC3-202ENST00000420329 C3orf22Q8N5N4 141 aa11.99□□□□□ -0.49
CRTC3-202ENST00000420329 HIGD2BQ4VC39 106 aa11.98□□□□□ -0.49
CRTC3-202ENST00000420329 FN1P02751 2386 aaKnown RBP11.98□□□□□ -0.49
CRTC3-202ENST00000420329 AMELXQ99217 191 aa11.98□□□□□ -0.49
CRTC3-202ENST00000420329 IMUPQ9GZP8 106 aa11.98□□□□□ -0.49
CRTC3-202ENST00000420329 SMIM9A6NGZ8 99 aa11.98□□□□□ -0.49
CRTC3-202ENST00000420329 C6orf99Q4VX62 202 aa11.98□□□□□ -0.49
CRTC3-202ENST00000420329 SMIM11BQ8TCY0 68 aa11.98□□□□□ -0.49
CRTC3-202ENST00000420329 TMEM258P61165 79 aa11.97□□□□□ -0.49
CRTC3-202ENST00000420329 KIF25-AS1Q9Y6Z4 181 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms