RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 ATP5L2Q7Z4Y8 100 aa13.28□□□□□ -0.28
PKNOX1-202ENST00000418336 CLRN3Q8NCR9 226 aa13.28□□□□□ -0.28
PKNOX1-202ENST00000418336 CHCHD10Q8WYQ3 142 aaPredicted RBP13.28□□□□□ -0.28
PKNOX1-202ENST00000418336 FAM104AQ969W3 186 aa13.28□□□□□ -0.28
PKNOX1-202ENST00000418336 CHAC1Q9BUX1 264 aa13.28□□□□□ -0.28
PKNOX1-202ENST00000418336 IGKV3OR2-268A0A0C4DH90 116 aa13.27□□□□□ -0.29
PKNOX1-202ENST00000418336 C7orf77A4D0Y5 90 aa13.27□□□□□ -0.29
PKNOX1-202ENST00000418336 D6R8Y8 96 aa13.27□□□□□ -0.29
PKNOX1-202ENST00000418336 TNFRSF6BO95407 300 aa13.27□□□□□ -0.29
PKNOX1-202ENST00000418336 FOXI1Q12951 378 aa13.27□□□□□ -0.29
PKNOX1-202ENST00000418336 UBE2D4Q9Y2X8 147 aa13.27□□□□□ -0.29
PKNOX1-202ENST00000418336 PANO1I0J062 215 aa13.26□□□□□ -0.29
PKNOX1-202ENST00000418336 NPYP01303 97 aa13.26□□□□□ -0.29
PKNOX1-202ENST00000418336 CKS2P33552 79 aa13.26□□□□□ -0.29
PKNOX1-202ENST00000418336 SDIM1Q6ZPB5 146 aa13.26□□□□□ -0.29
PKNOX1-202ENST00000418336 CIRBP-AS1Q8TBR5 109 aa13.26□□□□□ -0.29
PKNOX1-202ENST00000418336 ANAPC16Q96DE5 110 aa13.26□□□□□ -0.29
PKNOX1-202ENST00000418336 LINC00959A0A1B0GUT2 108 aa13.25□□□□□ -0.29
PKNOX1-202ENST00000418336 S100A8P05109 93 aa13.25□□□□□ -0.29
PKNOX1-202ENST00000418336 KRTAP10-4P60372 401 aaPredicted RBP13.25□□□□□ -0.29
PKNOX1-202ENST00000418336 CSDC2Q9Y534 153 aaKnown RBP13.25□□□□□ -0.29
PKNOX1-202ENST00000418336 UQCC3Q6UW78 93 aa13.24□□□□□ -0.29
PKNOX1-202ENST00000418336 ZNF664Q8N3J9 261 aa13.24□□□□□ -0.29
PKNOX1-202ENST00000418336 SMIM2Q9BVW6 85 aa13.24□□□□□ -0.29
PKNOX1-202ENST00000418336 hDV102S1A0JD36 115 aa13.23□□□□□ -0.29
PKNOX1-202ENST00000418336 TMEM218A2RU14 115 aa13.23□□□□□ -0.29
PKNOX1-202ENST00000418336 F8W036 122 aa13.23□□□□□ -0.29
PKNOX1-202ENST00000418336 MT-ND4LP03901 98 aa13.23□□□□□ -0.29
PKNOX1-202ENST00000418336 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.23□□□□□ -0.29
PKNOX1-202ENST00000418336 PHOX2AO14813 284 aa13.22□□□□□ -0.29
PKNOX1-202ENST00000418336 FCER1GP30273 86 aa13.22□□□□□ -0.29
PKNOX1-202ENST00000418336 TMEM101Q96IK0 257 aa13.22□□□□□ -0.29
PKNOX1-202ENST00000418336 KIR2DL4Q99706 377 aa13.22□□□□□ -0.29
PKNOX1-202ENST00000418336 PRSS47A8MTI9 375 aa13.21□□□□□ -0.29
PKNOX1-202ENST00000418336 PPBPP02775 128 aa13.21□□□□□ -0.29
PKNOX1-202ENST00000418336 INAFM2P0DMQ5 153 aa13.21□□□□□ -0.29
PKNOX1-202ENST00000418336 CIRBPQ14011 172 aaKnown RBP13.21□□□□□ -0.29
PKNOX1-202ENST00000418336 LINC00528Q8N1L1 170 aa13.21□□□□□ -0.29
PKNOX1-202ENST00000418336 BTF3L4Q96K17 158 aa13.21□□□□□ -0.29
PKNOX1-202ENST00000418336 TIMM21Q9BVV7 248 aa13.21□□□□□ -0.29
PKNOX1-202ENST00000418336 FLG2Q5D862 2391 aaPredicted RBP13.2□□□□□ -0.3
PKNOX1-202ENST00000418336 GVQW2A0A096LPI5 108 aaPredicted RBP13.2□□□□□ -0.3
PKNOX1-202ENST00000418336 FAM229AH3BQW9 127 aa13.2□□□□□ -0.3
PKNOX1-202ENST00000418336 CCL25O15444 150 aa13.2□□□□□ -0.3
PKNOX1-202ENST00000418336 RPL39P62891 51 aaKnown RBP13.19□□□□□ -0.3
PKNOX1-202ENST00000418336 XCL1P47992 114 aa13.18□□□□□ -0.3
PKNOX1-202ENST00000418336 HIGD2BQ4VC39 106 aa13.18□□□□□ -0.3
PKNOX1-202ENST00000418336 TMEM136Q6ZRR5 245 aa13.18□□□□□ -0.3
PKNOX1-202ENST00000418336 Q6ZUT4 128 aa13.18□□□□□ -0.3
PKNOX1-202ENST00000418336 ORMDL3Q8N138 153 aa13.18□□□□□ -0.3
PKNOX1-202ENST00000418336 TCAPO15273 167 aa13.17□□□□□ -0.3
PKNOX1-202ENST00000418336 RNASE13Q5GAN3 156 aaKnown RBP13.17□□□□□ -0.3
PKNOX1-202ENST00000418336 PRELID3AQ96N28 172 aa13.17□□□□□ -0.3
PKNOX1-202ENST00000418336 IMMP2LQ96T52 175 aa13.17□□□□□ -0.3
PKNOX1-202ENST00000418336 C10orf91Q5T1B1 145 aa13.16□□□□□ -0.3
PKNOX1-202ENST00000418336 CD164L2Q6UWJ8 174 aa13.16□□□□□ -0.3
PKNOX1-202ENST00000418336 SEC11CQ9BY50 192 aa13.16□□□□□ -0.3
PKNOX1-202ENST00000418336 FAT3Q8TDW7 4589 aa13.16□□□□□ -0.3
PKNOX1-202ENST00000418336 LRP1Q07954 4544 aaKnown RBP13.15□□□□□ -0.3
PKNOX1-202ENST00000418336 CFAP161Q6P656 301 aa13.15□□□□□ -0.3
PKNOX1-202ENST00000418336 COMMD7Q86VX2 200 aa13.14□□□□□ -0.31
PKNOX1-202ENST00000418336 OPRPNQ99935 248 aaPredicted RBP13.14□□□□□ -0.31
PKNOX1-202ENST00000418336 IGHV3-64A0A075B6Q5 118 aa13.13□□□□□ -0.31
PKNOX1-202ENST00000418336 SS18Q15532 418 aa13.13□□□□□ -0.31
PKNOX1-202ENST00000418336 AP5S1Q9NUS5 200 aa13.13□□□□□ -0.31
PKNOX1-202ENST00000418336 LAMTOR2Q9Y2Q5 125 aa13.13□□□□□ -0.31
PKNOX1-202ENST00000418336 SPACA4Q8TDM5 124 aa13.12□□□□□ -0.31
PKNOX1-202ENST00000418336 IGHV1-58A0A0C4DH39 117 aa13.11□□□□□ -0.31
PKNOX1-202ENST00000418336 C1orf196B1AJZ1 125 aa13.11□□□□□ -0.31
PKNOX1-202ENST00000418336 CHTF8P0CG12 524 aa13.11□□□□□ -0.31
PKNOX1-202ENST00000418336 MRPS36P82909 103 aaKnown RBP13.11□□□□□ -0.31
PKNOX1-202ENST00000418336 TMEM18Q96B42 140 aa13.11□□□□□ -0.31
PKNOX1-202ENST00000418336 CTDSP1Q9GZU7 261 aa13.11□□□□□ -0.31
PKNOX1-202ENST00000418336 SPANXA1Q9NS26 97 aa13.11□□□□□ -0.31
PKNOX1-202ENST00000418336 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.1□□□□□ -0.31
PKNOX1-202ENST00000418336 LINC00526Q96FQ7 95 aa13.1□□□□□ -0.31
PKNOX1-202ENST00000418336 TRAV13-1A0A0B4J241 112 aa13.09□□□□□ -0.31
PKNOX1-202ENST00000418336 PLA2G1BP04054 148 aaKnown RBP13.09□□□□□ -0.31
PKNOX1-202ENST00000418336 SMAGPQ0VAQ4 97 aa13.09□□□□□ -0.31
PKNOX1-202ENST00000418336 PRSS3P2Q8NHM4 247 aa13.09□□□□□ -0.31
PKNOX1-202ENST00000418336 CARHSP1Q9Y2V2 147 aaKnown RBP13.09□□□□□ -0.31
PKNOX1-202ENST00000418336 Q8N8P6 123 aa13.08□□□□□ -0.32
PKNOX1-202ENST00000418336 PYGO1Q9Y3Y4 419 aa13.08□□□□□ -0.32
PKNOX1-202ENST00000418336 TRAV9-1A0A075B6T8 112 aa13.07□□□□□ -0.32
PKNOX1-202ENST00000418336 COX6A2Q02221 97 aa13.07□□□□□ -0.32
PKNOX1-202ENST00000418336 LOC389332A0A1B0GUA5 103 aa13.06□□□□□ -0.32
PKNOX1-202ENST00000418336 MAP1LC3AQ9H492 121 aa13.06□□□□□ -0.32
PKNOX1-202ENST00000418336 IGLV4-3A0A075B6K6 122 aa13.05□□□□□ -0.32
PKNOX1-202ENST00000418336 A0A087WYN8 130 aa13.05□□□□□ -0.32
PKNOX1-202ENST00000418336 IGHV3OR16-9A0A0B4J2B5 98 aa13.05□□□□□ -0.32
PKNOX1-202ENST00000418336 PLAC8Q9NZF1 115 aa13.05□□□□□ -0.32
PKNOX1-202ENST00000418336 DMBT1Q9UGM3 2413 aaPredicted RBP13.05□□□□□ -0.32
PKNOX1-202ENST00000418336 COX7A2LO14548 114 aa13.04□□□□□ -0.32
PKNOX1-202ENST00000418336 RAB5AP20339 215 aa13.04□□□□□ -0.32
PKNOX1-202ENST00000418336 IGLV4-69A0A075B6H9 119 aa13.03□□□□□ -0.32
PKNOX1-202ENST00000418336 A0A096LNI7 61 aa13.03□□□□□ -0.32
PKNOX1-202ENST00000418336 HNRNPA3P51991 378 aaKnown RBP13.03□□□□□ -0.32
PKNOX1-202ENST00000418336 KIAA1644Q3SXP7 199 aa13.03□□□□□ -0.32
PKNOX1-202ENST00000418336 C5orf38Q86SI9 138 aa13.03□□□□□ -0.32
PKNOX1-202ENST00000418336 LINC00173Q6ZV60 143 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms