RNA–Protein interactions for RNA: ENST00000416321.5

DEPDC4-203, Transcript of DEP domain containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DEPDC4, Length 1,155 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-203ENST00000416321 TIMM21Q9BVV7 248 aa7.07□□□□□ -1.28
DEPDC4-203ENST00000416321 UBE2D4Q9Y2X8 147 aa7.07□□□□□ -1.28
DEPDC4-203ENST00000416321 A0A087WX48 190 aa7.06□□□□□ -1.28
DEPDC4-203ENST00000416321 TRAV12-1A0A0B4J245 112 aa7.06□□□□□ -1.28
DEPDC4-203ENST00000416321 TRAV8-6A0A0B4J262 113 aa7.06□□□□□ -1.28
DEPDC4-203ENST00000416321 HSBP1L1C9JCN9 74 aa7.06□□□□□ -1.28
DEPDC4-203ENST00000416321 ZNF25P17030 456 aaPredicted RBP7.06□□□□□ -1.28
DEPDC4-203ENST00000416321 LINC01545Q5VT33 79 aa7.06□□□□□ -1.28
DEPDC4-203ENST00000416321 C12orf57Q99622 126 aa7.06□□□□□ -1.28
DEPDC4-203ENST00000416321 C2orf88Q9BSF0 95 aa7.06□□□□□ -1.28
DEPDC4-203ENST00000416321 CHTOPQ9Y3Y2 248 aaKnown RBP7.06□□□□□ -1.28
DEPDC4-203ENST00000416321 IGLV4-3A0A075B6K6 122 aa7.05□□□□□ -1.28
DEPDC4-203ENST00000416321 IGLL5B9A064 214 aa7.05□□□□□ -1.28
DEPDC4-203ENST00000416321 TIRAPP58753 221 aa7.05□□□□□ -1.28
DEPDC4-203ENST00000416321 LELP1Q5T871 98 aa7.05□□□□□ -1.28
DEPDC4-203ENST00000416321 CEMP1Q6PRD7 247 aaPredicted RBP7.05□□□□□ -1.28
DEPDC4-203ENST00000416321 MRPL52Q86TS9 123 aaKnown RBP7.05□□□□□ -1.28
DEPDC4-203ENST00000416321 LINC00518Q8N0U6 118 aa7.05□□□□□ -1.28
DEPDC4-203ENST00000416321 PMCHL2Q9BQD1 86 aa7.05□□□□□ -1.28
DEPDC4-203ENST00000416321 DNAH9Q9NYC9 4486 aa7.05□□□□□ -1.28
DEPDC4-203ENST00000416321 TENM3Q9P273 2699 aa7.04□□□□□ -1.28
DEPDC4-203ENST00000416321 PRSS29PA6NIE9 313 aa7.04□□□□□ -1.28
DEPDC4-203ENST00000416321 F8VRH5 84 aa7.04□□□□□ -1.28
DEPDC4-203ENST00000416321 DPM2O94777 84 aa7.04□□□□□ -1.28
DEPDC4-203ENST00000416321 PLNP26678 52 aa7.04□□□□□ -1.28
DEPDC4-203ENST00000416321 MRPS36P82909 103 aaKnown RBP7.04□□□□□ -1.28
DEPDC4-203ENST00000416321 ODF1Q14990 250 aa7.04□□□□□ -1.28
DEPDC4-203ENST00000416321 LYPD5Q6UWN5 251 aa7.04□□□□□ -1.28
DEPDC4-203ENST00000416321 Q8N976 141 aa7.04□□□□□ -1.28
DEPDC4-203ENST00000416321 OPRPNQ99935 248 aaPredicted RBP7.04□□□□□ -1.28
DEPDC4-203ENST00000416321 VAMP8Q9BV40 100 aa7.04□□□□□ -1.28
DEPDC4-203ENST00000416321 CST9LQ9H4G1 147 aa7.04□□□□□ -1.28
DEPDC4-203ENST00000416321 CSDC2Q9Y534 153 aaKnown RBP7.04□□□□□ -1.28
DEPDC4-203ENST00000416321 IGKCP01834 107 aa7.03□□□□□ -1.28
DEPDC4-203ENST00000416321 Q6ZUT4 128 aa7.03□□□□□ -1.28
DEPDC4-203ENST00000416321 ATOH7Q8N100 152 aa7.03□□□□□ -1.28
DEPDC4-203ENST00000416321 MRPL35Q9NZE8 188 aaKnown RBP7.03□□□□□ -1.28
DEPDC4-203ENST00000416321 NUPR2A6NF83 97 aa7.02□□□□□ -1.29
DEPDC4-203ENST00000416321 RNASE13Q5GAN3 156 aaKnown RBP7.02□□□□□ -1.29
DEPDC4-203ENST00000416321 ZNF664Q8N3J9 261 aa7.02□□□□□ -1.29
DEPDC4-203ENST00000416321 KLK5Q9Y337 293 aaPredicted RBP7.02□□□□□ -1.29
DEPDC4-203ENST00000416321 TRAV9-2A0A087WT02 112 aa7.01□□□□□ -1.29
DEPDC4-203ENST00000416321 CCL18P55774 89 aa7.01□□□□□ -1.29
DEPDC4-203ENST00000416321 RBX1P62877 108 aa7.01□□□□□ -1.29
DEPDC4-203ENST00000416321 ZC2HC1BQ5TFG8 222 aa7.01□□□□□ -1.29
DEPDC4-203ENST00000416321 Q8N3U1 123 aa7.01□□□□□ -1.29
DEPDC4-203ENST00000416321 AMELXQ99217 191 aa7.01□□□□□ -1.29
DEPDC4-203ENST00000416321 CDC42SE2Q9NRR3 84 aa7.01□□□□□ -1.29
DEPDC4-203ENST00000416321 PAM16Q9Y3D7 125 aa7.01□□□□□ -1.29
DEPDC4-203ENST00000416321 IGKV3OR2-268A0A0C4DH90 116 aa7□□□□□ -1.29
DEPDC4-203ENST00000416321 A0A1B0GUV1 79 aa7□□□□□ -1.29
DEPDC4-203ENST00000416321 HERVK_113P61574 105 aa7□□□□□ -1.29
DEPDC4-203ENST00000416321 SEC11AP67812 179 aa7□□□□□ -1.29
DEPDC4-203ENST00000416321 SPATA45Q537H7 98 aa7□□□□□ -1.29
DEPDC4-203ENST00000416321 MPV17L2Q567V2 206 aa7□□□□□ -1.29
DEPDC4-203ENST00000416321 CDPF1Q6NVV7 123 aa7□□□□□ -1.29
DEPDC4-203ENST00000416321 CHAC1Q9BUX1 264 aa7□□□□□ -1.29
DEPDC4-203ENST00000416321 GEMIN7Q9H840 131 aaKnown RBP7□□□□□ -1.29
DEPDC4-203ENST00000416321 IGLV4-60A0A075B6I1 120 aa6.99□□□□□ -1.29
DEPDC4-203ENST00000416321 TRAV13-1A0A0B4J241 112 aa6.99□□□□□ -1.29
DEPDC4-203ENST00000416321 hDV102S1A0JD36 115 aa6.99□□□□□ -1.29
DEPDC4-203ENST00000416321 ANGP03950 147 aaKnown RBP6.99□□□□□ -1.29
DEPDC4-203ENST00000416321 ESRGQ1W209 222 aa6.99□□□□□ -1.29
DEPDC4-203ENST00000416321 TMEM170BQ5T4T1 132 aa6.99□□□□□ -1.29
DEPDC4-203ENST00000416321 IGLV4-69A0A075B6H9 119 aa6.98□□□□□ -1.29
DEPDC4-203ENST00000416321 A0A0J9YXV3 536 aa6.98□□□□□ -1.29
DEPDC4-203ENST00000416321 TSTD3H0UI37 97 aa6.98□□□□□ -1.29
DEPDC4-203ENST00000416321 IGLC3P0DOY3 106 aa6.98□□□□□ -1.29
DEPDC4-203ENST00000416321 UBE2D1P51668 147 aa6.98□□□□□ -1.29
DEPDC4-203ENST00000416321 NFE4Q86UQ8 179 aa6.98□□□□□ -1.29
DEPDC4-203ENST00000416321 UBE2DNLQ8IWF7 75 aa6.98□□□□□ -1.29
DEPDC4-203ENST00000416321 TINCRA0A1B0GVN0 87 aa6.97□□□□□ -1.29
DEPDC4-203ENST00000416321 C11orf86A6NJI1 115 aa6.97□□□□□ -1.29
DEPDC4-203ENST00000416321 H3BRM9 83 aa6.97□□□□□ -1.29
DEPDC4-203ENST00000416321 IGHV3-30P01768 117 aa6.97□□□□□ -1.29
DEPDC4-203ENST00000416321 IGHV3-33P01772 117 aa6.97□□□□□ -1.29
DEPDC4-203ENST00000416321 CRPP02741 224 aa6.97□□□□□ -1.29
DEPDC4-203ENST00000416321 IGHV3-30-3P0DP02 117 aa6.97□□□□□ -1.29
DEPDC4-203ENST00000416321 IGHV3-30-5P0DP03 117 aa6.97□□□□□ -1.29
DEPDC4-203ENST00000416321 TCTAP57738 103 aa6.97□□□□□ -1.29
DEPDC4-203ENST00000416321 HERVK_113P63121 156 aa6.97□□□□□ -1.29
DEPDC4-203ENST00000416321 SS18Q15532 418 aa6.97□□□□□ -1.29
DEPDC4-203ENST00000416321 WFDC10BQ8IUB3 73 aa6.97□□□□□ -1.29
DEPDC4-203ENST00000416321 LINC00469Q8N7U9 141 aa6.97□□□□□ -1.29
DEPDC4-203ENST00000416321 FAM104AQ969W3 186 aa6.97□□□□□ -1.29
DEPDC4-203ENST00000416321 MRPS16Q9Y3D3 137 aaKnown RBP6.97□□□□□ -1.29
DEPDC4-203ENST00000416321 MAJINQ3KP22 176 aa6.96□□□□□ -1.3
DEPDC4-203ENST00000416321 CLPSL2Q6UWE3 100 aa6.96□□□□□ -1.3
DEPDC4-203ENST00000416321 LINC00269Q8N2A0 174 aa6.96□□□□□ -1.3
DEPDC4-203ENST00000416321 STPG4Q8N801 248 aa6.96□□□□□ -1.3
DEPDC4-203ENST00000416321 MEGF8Q7Z7M0 2845 aa6.96□□□□□ -1.3
DEPDC4-203ENST00000416321 CCL25O15444 150 aa6.95□□□□□ -1.3
DEPDC4-203ENST00000416321 REG3AQ06141 175 aa6.95□□□□□ -1.3
DEPDC4-203ENST00000416321 PRO1933Q9H354 126 aa6.95□□□□□ -1.3
DEPDC4-203ENST00000416321 KLK12Q9UKR0 248 aa6.95□□□□□ -1.3
DEPDC4-203ENST00000416321 APLNQ9ULZ1 77 aa6.95□□□□□ -1.3
DEPDC4-203ENST00000416321 LINC00588Q9Y4M8 146 aa6.95□□□□□ -1.3
DEPDC4-203ENST00000416321 PRKDCP78527 4128 aaKnown RBP6.95□□□□□ -1.3
DEPDC4-203ENST00000416321 LINC00959A0A1B0GUT2 108 aa6.94□□□□□ -1.3
DEPDC4-203ENST00000416321 SIVA1O15304 175 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 113.5 ms