RNA–Protein interactions for RNA: ENST00000414183.6

EWSR1-208, Transcript of EWS RNA binding protein 1, human

APPRIS P4 TSL 2 BASIC

Gene EWSR1, Length 2,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
EWSR1-208	ENST00000414183	PRB1	P04280	392 aa		13.8	□□□□□ -0.2
EWSR1-208	ENST00000414183	HERVK_113	P63121	156 aa		13.8	□□□□□ -0.2
EWSR1-208	ENST00000414183	CSDC2	Q9Y534	153 aa	Known RBP	13.8	□□□□□ -0.2
EWSR1-208	ENST00000414183	UTP20	O75691	2785 aa	Known RBP	13.8	□□□□□ -0.2
EWSR1-208	ENST00000414183	KRTAP1-3	Q8IUG1	177 aa		13.79	□□□□□ -0.2
EWSR1-208	ENST00000414183	STH	Q8IWL8	128 aa		13.79	□□□□□ -0.2
EWSR1-208	ENST00000414183	DGAT2L7P	Q6IED9	249 aa		13.79	□□□□□ -0.2
EWSR1-208	ENST00000414183	MXRA5	Q9NR99	2828 aa		13.79	□□□□□ -0.2
EWSR1-208	ENST00000414183	KMT2B	Q9UMN6	2715 aa	Predicted RBP	13.78	□□□□□ -0.2
EWSR1-208	ENST00000414183	COX6C	P09669	75 aa		13.78	□□□□□ -0.2
EWSR1-208	ENST00000414183	LINC00242	Q5T6M2	205 aa		13.78	□□□□□ -0.2
EWSR1-208	ENST00000414183	NTN5	Q8WTR8	489 aa	Predicted RBP	13.78	□□□□□ -0.2
EWSR1-208	ENST00000414183	CREBBP	Q92793	2442 aa		13.77	□□□□□ -0.2
EWSR1-208	ENST00000414183	TRGV1	A0A0A0MS02	117 aa		13.77	□□□□□ -0.21
EWSR1-208	ENST00000414183	COX6A2	Q02221	97 aa		13.77	□□□□□ -0.21
EWSR1-208	ENST00000414183	TRAV26-1	A0A087WT03	109 aa		13.76	□□□□□ -0.21
EWSR1-208	ENST00000414183		K7EQD1	137 aa		13.76	□□□□□ -0.21
EWSR1-208	ENST00000414183		H3BT86	120 aa		13.76	□□□□□ -0.21
EWSR1-208	ENST00000414183	RPL36A	P83881	106 aa	Known RBP	13.76	□□□□□ -0.21
EWSR1-208	ENST00000414183	DAZ2	Q13117	558 aa	Known RBP	13.76	□□□□□ -0.21
EWSR1-208	ENST00000414183	DAZ4	Q86SG3	579 aa	Known RBP	13.76	□□□□□ -0.21
EWSR1-208	ENST00000414183	RPL36AL	Q969Q0	106 aa	Known RBP	13.76	□□□□□ -0.21
EWSR1-208	ENST00000414183	DAZ3	Q9NR90	486 aa	Known RBP	13.76	□□□□□ -0.21
EWSR1-208	ENST00000414183	BBC3	Q96PG8	261 aa	Predicted RBP	13.75	□□□□□ -0.21
EWSR1-208	ENST00000414183	TRAV4	A0A0B4J268	109 aa		13.75	□□□□□ -0.21
EWSR1-208	ENST00000414183	LST1	O00453	97 aa		13.75	□□□□□ -0.21
EWSR1-208	ENST00000414183	LINC00694	P0DN24	101 aa		13.75	□□□□□ -0.21
EWSR1-208	ENST00000414183	NPC2	P61916	151 aa		13.75	□□□□□ -0.21
EWSR1-208	ENST00000414183	CIRBP	Q14011	172 aa	Known RBP	13.75	□□□□□ -0.21
EWSR1-208	ENST00000414183	HIST2H2BD	Q6DRA6	164 aa		13.75	□□□□□ -0.21
EWSR1-208	ENST00000414183	TEX29	Q8N6K0	151 aa		13.75	□□□□□ -0.21
EWSR1-208	ENST00000414183	MYO18B	Q8IUG5	2567 aa		13.74	□□□□□ -0.21
EWSR1-208	ENST00000414183	SMIM1	B2RUZ4	78 aa		13.73	□□□□□ -0.21
EWSR1-208	ENST00000414183	NTM-AS1	Q6ZSK4	140 aa		13.73	□□□□□ -0.21
EWSR1-208	ENST00000414183	DNAJC9-AS1	A6NH13	148 aa		13.73	□□□□□ -0.21
EWSR1-208	ENST00000414183		H7C423	109 aa		13.73	□□□□□ -0.21
EWSR1-208	ENST00000414183		Q9H8V8	135 aa		13.73	□□□□□ -0.21
EWSR1-208	ENST00000414183		Q6ZTI0	123 aa		13.72	□□□□□ -0.21
EWSR1-208	ENST00000414183	LINC00308	Q8TCZ7	52 aa		13.72	□□□□□ -0.21
EWSR1-208	ENST00000414183	UBE2W	Q96B02	151 aa		13.72	□□□□□ -0.21
EWSR1-208	ENST00000414183	POLQ	O75417	2590 aa		13.72	□□□□□ -0.21
EWSR1-208	ENST00000414183	CCL24	O00175	119 aa		13.72	□□□□□ -0.21
EWSR1-208	ENST00000414183	CITED1	Q99966	193 aa		13.72	□□□□□ -0.21
EWSR1-208	ENST00000414183	UBR5	O95071	2799 aa	Predicted RBP	13.71	□□□□□ -0.21
EWSR1-208	ENST00000414183	C2orf82	Q6UX34	121 aa		13.71	□□□□□ -0.21
EWSR1-208	ENST00000414183	ZNF843	Q8N446	348 aa		13.71	□□□□□ -0.21
EWSR1-208	ENST00000414183	DAND5	Q8N907	189 aa		13.71	□□□□□ -0.21
EWSR1-208	ENST00000414183	TEX49	A0A1B0GTD5	131 aa		13.71	□□□□□ -0.22
EWSR1-208	ENST00000414183	COPS9	Q8WXC6	57 aa		13.71	□□□□□ -0.22
EWSR1-208	ENST00000414183	CITED2	Q99967	270 aa	Predicted RBP	13.71	□□□□□ -0.22
EWSR1-208	ENST00000414183	PPDPF	Q9H3Y8	114 aa		13.71	□□□□□ -0.22
EWSR1-208	ENST00000414183	ZNF625	Q96I27	306 aa	Predicted RBP	13.7	□□□□□ -0.22
EWSR1-208	ENST00000414183	CDC42SE2	Q9NRR3	84 aa		13.7	□□□□□ -0.22
EWSR1-208	ENST00000414183	ZFYVE26	Q68DK2	2539 aa		13.7	□□□□□ -0.22
EWSR1-208	ENST00000414183	CHD6	Q8TD26	2715 aa		13.7	□□□□□ -0.22
EWSR1-208	ENST00000414183		F5H768	121 aa		13.69	□□□□□ -0.22
EWSR1-208	ENST00000414183	CLEC2B	Q92478	149 aa		13.69	□□□□□ -0.22
EWSR1-208	ENST00000414183	NDUFA7	O95182	113 aa		13.68	□□□□□ -0.22
EWSR1-208	ENST00000414183	CMC4	P56277	68 aa	Predicted RBP	13.68	□□□□□ -0.22
EWSR1-208	ENST00000414183		A0A1W2PRX2	142 aa		13.67	□□□□□ -0.22
EWSR1-208	ENST00000414183	GIG44	P09565	113 aa	Predicted RBP	13.67	□□□□□ -0.22
EWSR1-208	ENST00000414183	TRAV13-1	A0A0B4J241	112 aa		13.66	□□□□□ -0.22
EWSR1-208	ENST00000414183	TRAV8-4	A0A0B4J246	113 aa		13.66	□□□□□ -0.22
EWSR1-208	ENST00000414183	HERV-K104	P63124	156 aa		13.66	□□□□□ -0.22
EWSR1-208	ENST00000414183	PLAC8L1	A1L4L8	177 aa		13.66	□□□□□ -0.22
EWSR1-208	ENST00000414183	GAGE12J	A6NER3	117 aa		13.66	□□□□□ -0.22
EWSR1-208	ENST00000414183	GAGE4	Q13068	117 aa		13.66	□□□□□ -0.22
EWSR1-208	ENST00000414183	GAGE5	Q13069	117 aa		13.66	□□□□□ -0.22
EWSR1-208	ENST00000414183	DEFB121	Q5J5C9	76 aa		13.66	□□□□□ -0.22
EWSR1-208	ENST00000414183	FAM110A	Q9BQ89	295 aa		13.66	□□□□□ -0.22
EWSR1-208	ENST00000414183	ESM1	Q9NQ30	184 aa		13.66	□□□□□ -0.22
EWSR1-208	ENST00000414183	SOSTDC1	Q6X4U4	206 aa		13.65	□□□□□ -0.22
EWSR1-208	ENST00000414183	C16orf74	Q96GX8	76 aa		13.65	□□□□□ -0.22
EWSR1-208	ENST00000414183	ZNF462	Q96JM2	2506 aa		13.65	□□□□□ -0.22
EWSR1-208	ENST00000414183	NAV2	Q8IVL1	2488 aa		13.65	□□□□□ -0.22
EWSR1-208	ENST00000414183	C11orf44	Q8N8P7	122 aa		13.65	□□□□□ -0.22
EWSR1-208	ENST00000414183	TMEM243	Q9BU79	118 aa		13.65	□□□□□ -0.22
EWSR1-208	ENST00000414183	NOP10	Q9NPE3	64 aa	Known RBP	13.65	□□□□□ -0.22
EWSR1-208	ENST00000414183	PTPN13	Q12923	2485 aa		13.64	□□□□□ -0.23
EWSR1-208	ENST00000414183	PRIMA1	Q86XR5	153 aa		13.64	□□□□□ -0.23
EWSR1-208	ENST00000414183	ANAPC13	Q9BS18	74 aa		13.64	□□□□□ -0.23
EWSR1-208	ENST00000414183	SHISA2	Q6UWI4	295 aa		13.64	□□□□□ -0.23
EWSR1-208	ENST00000414183	FAM208B	Q5VWN6	2430 aa		13.63	□□□□□ -0.23
EWSR1-208	ENST00000414183	FAM240A	A0A1B0GVK7	77 aa		13.63	□□□□□ -0.23
EWSR1-208	ENST00000414183	TRBV6-4	A0A1B0GX49	114 aa		13.62	□□□□□ -0.23
EWSR1-208	ENST00000414183	COX7A2L	O14548	114 aa		13.62	□□□□□ -0.23
EWSR1-208	ENST00000414183	SNCG	O76070	127 aa		13.62	□□□□□ -0.23
EWSR1-208	ENST00000414183	LRRK2	Q5S007	2527 aa		13.62	□□□□□ -0.23
EWSR1-208	ENST00000414183	AKAP9	Q99996	3911 aa		13.62	□□□□□ -0.23
EWSR1-208	ENST00000414183	TEX15	Q9BXT5	2789 aa		13.62	□□□□□ -0.23
EWSR1-208	ENST00000414183	UBE2L6	O14933	153 aa		13.61	□□□□□ -0.23
EWSR1-208	ENST00000414183	MEIG1	Q5JSS6	88 aa		13.61	□□□□□ -0.23
EWSR1-208	ENST00000414183		Q6Q795	121 aa		13.61	□□□□□ -0.23
EWSR1-208	ENST00000414183	OVOL2	Q9BRP0	275 aa		13.61	□□□□□ -0.23
EWSR1-208	ENST00000414183	WFDC11	Q8NEX6	87 aa		13.61	□□□□□ -0.23
EWSR1-208	ENST00000414183	C19orf73	Q9NVV2	129 aa		13.61	□□□□□ -0.23
EWSR1-208	ENST00000414183	MRPL23	Q16540	153 aa	Known RBP	13.6	□□□□□ -0.23
EWSR1-208	ENST00000414183	C16orf95	Q9H693	158 aa		13.6	□□□□□ -0.23
EWSR1-208	ENST00000414183	MYO9A	B2RTY4	2548 aa		13.59	□□□□□ -0.23
EWSR1-208	ENST00000414183	CRLF1	O75462	422 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 66.3 ms