RNA–Protein interactions for RNA: ENST00000413553.1

SIK3-202, Transcript of SIK family kinase 3, humanhuman

TSL 5

Gene SIK3, Length 3,054 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-202ENST00000413553 TNFRSF18Q9Y5U5 241 aa6.53□□□□□ -1.36
SIK3-202ENST00000413553 ACANP16112 2415 aa6.53□□□□□ -1.36
SIK3-202ENST00000413553 SNRPD3P62318 126 aaKnown RBP6.53□□□□□ -1.36
SIK3-202ENST00000413553 WFDC11Q8NEX6 87 aa6.53□□□□□ -1.36
SIK3-202ENST00000413553 DUX5Q96PT3 197 aa6.53□□□□□ -1.36
SIK3-202ENST00000413553 ITPR3Q14573 2671 aa6.53□□□□□ -1.36
SIK3-202ENST00000413553 FLNAP21333 2647 aaKnown RBP6.53□□□□□ -1.36
SIK3-202ENST00000413553 KNCNA6PVL3 124 aa6.53□□□□□ -1.36
SIK3-202ENST00000413553 IGHV4-31P0DP07 118 aa6.53□□□□□ -1.36
SIK3-202ENST00000413553 PYGO1Q9Y3Y4 419 aa6.53□□□□□ -1.36
SIK3-202ENST00000413553 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.52□□□□□ -1.37
SIK3-202ENST00000413553 TRBV7-7A0A0K0K1E9 115 aa6.52□□□□□ -1.37
SIK3-202ENST00000413553 IGKV2-29A2NJV5 120 aaPredicted RBP6.52□□□□□ -1.37
SIK3-202ENST00000413553 H3BUA1 57 aa6.52□□□□□ -1.37
SIK3-202ENST00000413553 J3QLI3 93 aa6.52□□□□□ -1.37
SIK3-202ENST00000413553 IGHG2P01859 326 aa6.52□□□□□ -1.37
SIK3-202ENST00000413553 NACAE9PAV3 2078 aa6.52□□□□□ -1.37
SIK3-202ENST00000413553 CUBNO60494 3623 aa6.52□□□□□ -1.37
SIK3-202ENST00000413553 A0A096LNT2 108 aa6.52□□□□□ -1.37
SIK3-202ENST00000413553 FAM104AQ969W3 186 aa6.52□□□□□ -1.37
SIK3-202ENST00000413553 ZNF625Q96I27 306 aaPredicted RBP6.52□□□□□ -1.37
SIK3-202ENST00000413553 TINCRA0A1B0GVN0 87 aa6.51□□□□□ -1.37
SIK3-202ENST00000413553 TMEM95Q3KNT9 176 aa6.51□□□□□ -1.37
SIK3-202ENST00000413553 DEFB121Q5J5C9 76 aa6.51□□□□□ -1.37
SIK3-202ENST00000413553 IGHV3-38A0A0C4DH36 116 aa6.51□□□□□ -1.37
SIK3-202ENST00000413553 CIRBPQ14011 172 aaKnown RBP6.51□□□□□ -1.37
SIK3-202ENST00000413553 DEFB112Q30KQ8 113 aa6.51□□□□□ -1.37
SIK3-202ENST00000413553 C9orf153Q5TBE3 101 aa6.51□□□□□ -1.37
SIK3-202ENST00000413553 TMEM126AQ9H061 195 aa6.51□□□□□ -1.37
SIK3-202ENST00000413553 LINC01587Q99440 93 aa6.5□□□□□ -1.37
SIK3-202ENST00000413553 Q9UF83 564 aa6.5□□□□□ -1.37
SIK3-202ENST00000413553 CDKN2A-AS1Q9UH64 79 aa6.5□□□□□ -1.37
SIK3-202ENST00000413553 K7EMT4 169 aa6.5□□□□□ -1.37
SIK3-202ENST00000413553 UBE2D4Q9Y2X8 147 aa6.5□□□□□ -1.37
SIK3-202ENST00000413553 MYO9AB2RTY4 2548 aa6.5□□□□□ -1.37
SIK3-202ENST00000413553 ZNF469Q96JG9 3925 aaPredicted RBP6.49□□□□□ -1.37
SIK3-202ENST00000413553 ACYP1P07311 99 aa6.49□□□□□ -1.37
SIK3-202ENST00000413553 CITED2Q99967 270 aaPredicted RBP6.49□□□□□ -1.37
SIK3-202ENST00000413553 CR1P17927 2039 aa6.49□□□□□ -1.37
SIK3-202ENST00000413553 IGHV4-59P01825 116 aa6.49□□□□□ -1.37
SIK3-202ENST00000413553 DGAT2L7PQ6IED9 249 aa6.49□□□□□ -1.37
SIK3-202ENST00000413553 LINC00467Q9BRT7 94 aa6.49□□□□□ -1.37
SIK3-202ENST00000413553 Q9H8V8 135 aa6.49□□□□□ -1.37
SIK3-202ENST00000413553 COX7A2LO14548 114 aa6.48□□□□□ -1.37
SIK3-202ENST00000413553 BRI3O95415 125 aa6.48□□□□□ -1.37
SIK3-202ENST00000413553 IGLV1-40P01703 118 aa6.48□□□□□ -1.37
SIK3-202ENST00000413553 PRM2P04554 102 aa6.48□□□□□ -1.37
SIK3-202ENST00000413553 SMCR5Q8TEV8 140 aa6.48□□□□□ -1.37
SIK3-202ENST00000413553 CHCHD7Q9BUK0 85 aa6.48□□□□□ -1.37
SIK3-202ENST00000413553 MXRA5Q9NR99 2828 aa6.48□□□□□ -1.37
SIK3-202ENST00000413553 K7EQG2 157 aa6.48□□□□□ -1.37
SIK3-202ENST00000413553 TIMM17BO60830 172 aa6.48□□□□□ -1.37
SIK3-202ENST00000413553 DAZ2Q13117 558 aaKnown RBP6.48□□□□□ -1.37
SIK3-202ENST00000413553 DAZ4Q86SG3 579 aaKnown RBP6.48□□□□□ -1.37
SIK3-202ENST00000413553 LINC00308Q8TCZ7 52 aa6.48□□□□□ -1.37
SIK3-202ENST00000413553 PPDPFQ9H3Y8 114 aa6.48□□□□□ -1.37
SIK3-202ENST00000413553 DAZ3Q9NR90 486 aaKnown RBP6.48□□□□□ -1.37
SIK3-202ENST00000413553 MTORP42345 2549 aa6.48□□□□□ -1.37
SIK3-202ENST00000413553 NDUFA1O15239 70 aa6.48□□□□□ -1.37
SIK3-202ENST00000413553 KRTAP1-3Q8IUG1 177 aa6.48□□□□□ -1.37
SIK3-202ENST00000413553 IMUPQ9GZP8 106 aa6.48□□□□□ -1.37
SIK3-202ENST00000413553 VPREB3Q9UKI3 123 aa6.48□□□□□ -1.37
SIK3-202ENST00000413553 A6NDX4 124 aa6.47□□□□□ -1.37
SIK3-202ENST00000413553 RBMY1A1P0DJD3 496 aaKnown RBP6.47□□□□□ -1.37
SIK3-202ENST00000413553 RBMY1CP0DJD4 496 aa6.47□□□□□ -1.37
SIK3-202ENST00000413553 RBMY1FQ15415 496 aaKnown RBP6.47□□□□□ -1.37
SIK3-202ENST00000413553 SYNJ2BPP57105 145 aa6.47□□□□□ -1.37
SIK3-202ENST00000413553 C10orf99Q6UWK7 81 aa6.47□□□□□ -1.37
SIK3-202ENST00000413553 LINC00643Q86TS7 51 aa6.47□□□□□ -1.37
SIK3-202ENST00000413553 Q6ZSN1 163 aa6.46□□□□□ -1.37
SIK3-202ENST00000413553 Q8N2B8 174 aa6.46□□□□□ -1.37
SIK3-202ENST00000413553 FLNBO75369 2602 aaKnown RBP6.46□□□□□ -1.37
SIK3-202ENST00000413553 BAALC-AS2P0C853 105 aa6.46□□□□□ -1.38
SIK3-202ENST00000413553 LINC00694P0DN24 101 aa6.46□□□□□ -1.38
SIK3-202ENST00000413553 GAGE2AQ6NT46 116 aa6.46□□□□□ -1.38
SIK3-202ENST00000413553 C3orf22Q8N5N4 141 aa6.46□□□□□ -1.38
SIK3-202ENST00000413553 COX6A2Q02221 97 aa6.46□□□□□ -1.38
SIK3-202ENST00000413553 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.46□□□□□ -1.38
SIK3-202ENST00000413553 PDZD2O15018 2839 aa6.45□□□□□ -1.38
SIK3-202ENST00000413553 NDUFA7O95182 113 aa6.45□□□□□ -1.38
SIK3-202ENST00000413553 HIVEP2P31629 2446 aa6.45□□□□□ -1.38
SIK3-202ENST00000413553 UQCRQO14949 82 aa6.45□□□□□ -1.38
SIK3-202ENST00000413553 PRIMA1Q86XR5 153 aa6.45□□□□□ -1.38
SIK3-202ENST00000413553 EDA2RQ9HAV5 297 aa6.45□□□□□ -1.38
SIK3-202ENST00000413553 SOSTDC1Q6X4U4 206 aa6.44□□□□□ -1.38
SIK3-202ENST00000413553 KLK5Q9Y337 293 aaPredicted RBP6.44□□□□□ -1.38
SIK3-202ENST00000413553 TIRAPP58753 221 aa6.44□□□□□ -1.38
SIK3-202ENST00000413553 CFHR3Q02985 330 aa6.44□□□□□ -1.38
SIK3-202ENST00000413553 ZNF415Q09FC8 603 aa6.44□□□□□ -1.38
SIK3-202ENST00000413553 Q6YL49 198 aa6.44□□□□□ -1.38
SIK3-202ENST00000413553 COPS9Q8WXC6 57 aa6.44□□□□□ -1.38
SIK3-202ENST00000413553 SETD2Q9BYW2 2564 aaPredicted RBP6.44□□□□□ -1.38
SIK3-202ENST00000413553 PSMB8P28062 276 aa6.44□□□□□ -1.38
SIK3-202ENST00000413553 DEFB131AP59861 70 aa6.44□□□□□ -1.38
SIK3-202ENST00000413553 HERVK_113P63121 156 aa6.44□□□□□ -1.38
SIK3-202ENST00000413553 Q9HAA7 133 aa6.44□□□□□ -1.38
SIK3-202ENST00000413553 TRAV13-1A0A0B4J241 112 aa6.43□□□□□ -1.38
SIK3-202ENST00000413553 TRACP01848 142 aa6.43□□□□□ -1.38
SIK3-202ENST00000413553 HOXD3P31249 432 aaPredicted RBP6.43□□□□□ -1.38
SIK3-202ENST00000413553 IGHV3OR16-12A0A075B7B8 117 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms