RNA–Protein interactions for RNA: ENST00000411500.5

HLA-DRB6-201, Transcript of major histocompatibility complex, class II, DR beta 6 (pseudogene), humanhuman

BASIC

Gene HLA-DRB6, Length 1,235 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB6-201ENST00000411500 ESDP10768 282 aa10.19□□□□□ -0.78
HLA-DRB6-201ENST00000411500 BLOC1S1P78537 153 aa10.19□□□□□ -0.78
HLA-DRB6-201ENST00000411500 PRR3P79522 188 aaKnown RBP10.19□□□□□ -0.78
HLA-DRB6-201ENST00000411500 SS18Q15532 418 aa10.19□□□□□ -0.78
HLA-DRB6-201ENST00000411500 ALKAL2Q6UX46 152 aa10.19□□□□□ -0.78
HLA-DRB6-201ENST00000411500 MRAP2Q96G30 205 aa10.19□□□□□ -0.78
HLA-DRB6-201ENST00000411500 FAM210AQ96ND0 272 aa10.19□□□□□ -0.78
HLA-DRB6-201ENST00000411500 ATP6V1G1O75348 118 aa10.18□□□□□ -0.78
HLA-DRB6-201ENST00000411500 ODF1Q14990 250 aa10.18□□□□□ -0.78
HLA-DRB6-201ENST00000411500 CARD19Q96LW7 228 aa10.18□□□□□ -0.78
HLA-DRB6-201ENST00000411500 ZNF561-AS1K7EIQ3 104 aa10.17□□□□□ -0.78
HLA-DRB6-201ENST00000411500 LINC01600Q96MT4 127 aa10.17□□□□□ -0.78
HLA-DRB6-201ENST00000411500 CDC42SE2Q9NRR3 84 aa10.17□□□□□ -0.78
HLA-DRB6-201ENST00000411500 A0A1B0GUT8 65 aa10.16□□□□□ -0.78
HLA-DRB6-201ENST00000411500 HIGD1CA8MV81 97 aa10.16□□□□□ -0.78
HLA-DRB6-201ENST00000411500 RAB4AP20338 218 aa10.16□□□□□ -0.78
HLA-DRB6-201ENST00000411500 POLR2KP53803 58 aaKnown RBP10.16□□□□□ -0.78
HLA-DRB6-201ENST00000411500 CT83Q5H943 113 aa10.16□□□□□ -0.78
HLA-DRB6-201ENST00000411500 ZNF664Q8N3J9 261 aa10.16□□□□□ -0.78
HLA-DRB6-201ENST00000411500 TMEM191AQ9H0A3 160 aa10.16□□□□□ -0.78
HLA-DRB6-201ENST00000411500 LINC00474Q9P2X8 69 aa10.16□□□□□ -0.78
HLA-DRB6-201ENST00000411500 SMKR1H3BMG3 65 aa10.15□□□□□ -0.78
HLA-DRB6-201ENST00000411500 SYCNQ0VAF6 134 aa10.15□□□□□ -0.78
HLA-DRB6-201ENST00000411500 CD164L2Q6UWJ8 174 aa10.15□□□□□ -0.78
HLA-DRB6-201ENST00000411500 AMN1Q8IY45 258 aa10.15□□□□□ -0.78
HLA-DRB6-201ENST00000411500 TSKUQ8WUA8 353 aa10.15□□□□□ -0.78
HLA-DRB6-201ENST00000411500 SMIM7Q9BQ49 75 aa10.15□□□□□ -0.78
HLA-DRB6-201ENST00000411500 EIF5A2Q9GZV4 153 aaKnown RBP10.15□□□□□ -0.78
HLA-DRB6-201ENST00000411500 LRP2P98164 4655 aa10.14□□□□□ -0.79
HLA-DRB6-201ENST00000411500 C7orf77A4D0Y5 90 aa10.14□□□□□ -0.79
HLA-DRB6-201ENST00000411500 GAGE2BQ13066 116 aa10.14□□□□□ -0.79
HLA-DRB6-201ENST00000411500 MRPL52Q86TS9 123 aaKnown RBP10.14□□□□□ -0.79
HLA-DRB6-201ENST00000411500 PKIGQ9Y2B9 76 aa10.14□□□□□ -0.79
HLA-DRB6-201ENST00000411500 TRBV27A0A0K0K1C4 114 aa10.13□□□□□ -0.79
HLA-DRB6-201ENST00000411500 MALP21145 153 aa10.13□□□□□ -0.79
HLA-DRB6-201ENST00000411500 FCER1GP30273 86 aa10.13□□□□□ -0.79
HLA-DRB6-201ENST00000411500 LINC01551Q86U37 167 aa10.13□□□□□ -0.79
HLA-DRB6-201ENST00000411500 IGLV4-69A0A075B6H9 119 aa10.12□□□□□ -0.79
HLA-DRB6-201ENST00000411500 ZNF727A8MUV8 499 aa10.12□□□□□ -0.79
HLA-DRB6-201ENST00000411500 VCYO14598 125 aa10.12□□□□□ -0.79
HLA-DRB6-201ENST00000411500 CAMPP49913 170 aa10.12□□□□□ -0.79
HLA-DRB6-201ENST00000411500 RNASE13Q5GAN3 156 aaKnown RBP10.12□□□□□ -0.79
HLA-DRB6-201ENST00000411500 SPINK6Q6UWN8 80 aa10.12□□□□□ -0.79
HLA-DRB6-201ENST00000411500 Q6ZRP5 223 aa10.11□□□□□ -0.79
HLA-DRB6-201ENST00000411500 OSTCQ9NRP0 149 aa10.11□□□□□ -0.79
HLA-DRB6-201ENST00000411500 TRAV13-1A0A0B4J241 112 aa10.1□□□□□ -0.79
HLA-DRB6-201ENST00000411500 A0A0J9YXV3 536 aa10.1□□□□□ -0.79
HLA-DRB6-201ENST00000411500 C1orf196B1AJZ1 125 aa10.1□□□□□ -0.79
HLA-DRB6-201ENST00000411500 S100A1P23297 94 aa10.1□□□□□ -0.79
HLA-DRB6-201ENST00000411500 PTTG1IPP53801 180 aa10.1□□□□□ -0.79
HLA-DRB6-201ENST00000411500 RIGQ13278 110 aa10.1□□□□□ -0.79
HLA-DRB6-201ENST00000411500 LCE2DQ5TA82 110 aaPredicted RBP10.1□□□□□ -0.79
HLA-DRB6-201ENST00000411500 REG3GQ6UW15 175 aa10.1□□□□□ -0.79
HLA-DRB6-201ENST00000411500 NUP35Q8NFH5 326 aa10.1□□□□□ -0.79
HLA-DRB6-201ENST00000411500 ISOC2Q96AB3 205 aa10.1□□□□□ -0.79
HLA-DRB6-201ENST00000411500 LOC107984640A0A0U1RRK4 108 aa10.09□□□□□ -0.79
HLA-DRB6-201ENST00000411500 COX7A2LO14548 114 aa10.09□□□□□ -0.79
HLA-DRB6-201ENST00000411500 SRP19P09132 144 aaKnown RBP10.09□□□□□ -0.79
HLA-DRB6-201ENST00000411500 SRSF9Q13242 221 aaKnown RBP eCLIP10.09□□□□□ -0.79
HLA-DRB6-201ENST00000411500 C5orf38Q86SI9 138 aa10.09□□□□□ -0.79
HLA-DRB6-201ENST00000411500 V9GYV3 84 aa10.09□□□□□ -0.79
HLA-DRB6-201ENST00000411500 A0A1W2PNN7 141 aa10.08□□□□□ -0.8
HLA-DRB6-201ENST00000411500 KRTAP10-8P60410 259 aa10.08□□□□□ -0.8
HLA-DRB6-201ENST00000411500 SUMO2P61956 95 aaKnown RBP10.08□□□□□ -0.8
HLA-DRB6-201ENST00000411500 NRACQ8N912 160 aa10.08□□□□□ -0.8
HLA-DRB6-201ENST00000411500 CAMK2N2Q96S95 79 aa10.08□□□□□ -0.8
HLA-DRB6-201ENST00000411500 KIR2DL4Q99706 377 aa10.08□□□□□ -0.8
HLA-DRB6-201ENST00000411500 UBE2D4Q9Y2X8 147 aa10.08□□□□□ -0.8
HLA-DRB6-201ENST00000411500 SMAGPQ0VAQ4 97 aa10.07□□□□□ -0.8
HLA-DRB6-201ENST00000411500 RNF213Q63HN8 5207 aa10.07□□□□□ -0.8
HLA-DRB6-201ENST00000411500 PPP1R17O96001 155 aa10.06□□□□□ -0.8
HLA-DRB6-201ENST00000411500 OPRPNQ99935 248 aaPredicted RBP10.06□□□□□ -0.8
HLA-DRB6-201ENST00000411500 CSDC2Q9Y534 153 aaKnown RBP10.06□□□□□ -0.8
HLA-DRB6-201ENST00000411500 RPL18AQ02543 176 aaKnown RBP10.05□□□□□ -0.8
HLA-DRB6-201ENST00000411500 MRPL51Q4U2R6 128 aaKnown RBP10.05□□□□□ -0.8
HLA-DRB6-201ENST00000411500 C9orf116Q5BN46 136 aaPredicted RBP10.05□□□□□ -0.8
HLA-DRB6-201ENST00000411500 Q6ZUT4 128 aa10.05□□□□□ -0.8
HLA-DRB6-201ENST00000411500 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.04□□□□□ -0.8
HLA-DRB6-201ENST00000411500 APOMO95445 188 aa10.04□□□□□ -0.8
HLA-DRB6-201ENST00000411500 TMEM241Q24JQ0 296 aa10.04□□□□□ -0.8
HLA-DRB6-201ENST00000411500 FAM104BQ5XKR9 115 aa10.04□□□□□ -0.8
HLA-DRB6-201ENST00000411500 NAT8BQ9UHF3 227 aa10.04□□□□□ -0.8
HLA-DRB6-201ENST00000411500 PPP1R2P9O14990 202 aa10.03□□□□□ -0.8
HLA-DRB6-201ENST00000411500 RPL23P62829 140 aaKnown RBP10.03□□□□□ -0.8
HLA-DRB6-201ENST00000411500 SPAG11BQ08648 103 aa10.03□□□□□ -0.8
HLA-DRB6-201ENST00000411500 SLC7A5P1Q8MH63 180 aa10.03□□□□□ -0.8
HLA-DRB6-201ENST00000411500 TMEM18Q96B42 140 aa10.03□□□□□ -0.8
HLA-DRB6-201ENST00000411500 C2orf48Q96LS8 159 aa10.03□□□□□ -0.8
HLA-DRB6-201ENST00000411500 MT-ND6P03923 174 aa10.02□□□□□ -0.81
HLA-DRB6-201ENST00000411500 RPL39P62891 51 aaKnown RBP10.02□□□□□ -0.81
HLA-DRB6-201ENST00000411500 ADIRFQ15847 76 aa10.02□□□□□ -0.81
HLA-DRB6-201ENST00000411500 PHF5AQ7RTV0 110 aaKnown RBP10.02□□□□□ -0.81
HLA-DRB6-201ENST00000411500 PSORS1C2Q9UIG4 136 aa10.02□□□□□ -0.81
HLA-DRB6-201ENST00000411500 CKS2P33552 79 aa10.01□□□□□ -0.81
HLA-DRB6-201ENST00000411500 LINC00862A6NCI5 91 aa10□□□□□ -0.81
HLA-DRB6-201ENST00000411500 FAM74A3Q4VXF1 159 aa10□□□□□ -0.81
HLA-DRB6-201ENST00000411500 CLLU1Q5K131 121 aa10□□□□□ -0.81
HLA-DRB6-201ENST00000411500 C20orf78Q9BR46 151 aa10□□□□□ -0.81
HLA-DRB6-201ENST00000411500 TIMM21Q9BVV7 248 aa10□□□□□ -0.81
HLA-DRB6-201ENST00000411500 SMIM27A0A1W2PRY6 76 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms