RNA–Protein interactions for RNA: ENST00000411482.1

LMO2-203, Transcript of LIM domain only 2, humanhuman

TSL 1 (best)

Gene LMO2, Length 1,519 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO2-203ENST00000411482 TMEM223A0PJW6 202 aa13.63□□□□□ -0.23
LMO2-203ENST00000411482 K7EIL1 84 aa13.63□□□□□ -0.23
LMO2-203ENST00000411482 LINC00694P0DN24 101 aa13.63□□□□□ -0.23
LMO2-203ENST00000411482 NTM-AS1Q6ZSK4 140 aa13.63□□□□□ -0.23
LMO2-203ENST00000411482 ZMAT5Q9UDW3 170 aaKnown RBP13.63□□□□□ -0.23
LMO2-203ENST00000411482 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.62□□□□□ -0.23
LMO2-203ENST00000411482 IGKV2-29A2NJV5 120 aaPredicted RBP13.62□□□□□ -0.23
LMO2-203ENST00000411482 ZNF22P17026 224 aaPredicted RBP13.62□□□□□ -0.23
LMO2-203ENST00000411482 CEMP1Q6PRD7 247 aaPredicted RBP13.62□□□□□ -0.23
LMO2-203ENST00000411482 A0A0J9YXV3 536 aa13.61□□□□□ -0.23
LMO2-203ENST00000411482 A6NDN8 102 aa13.61□□□□□ -0.23
LMO2-203ENST00000411482 TMEM170BQ5T4T1 132 aa13.61□□□□□ -0.23
LMO2-203ENST00000411482 GAGE12JA6NER3 117 aa13.6□□□□□ -0.23
LMO2-203ENST00000411482 GAGE4Q13068 117 aa13.6□□□□□ -0.23
LMO2-203ENST00000411482 GAGE5Q13069 117 aa13.6□□□□□ -0.23
LMO2-203ENST00000411482 GAGE13Q4V321 117 aa13.6□□□□□ -0.23
LMO2-203ENST00000411482 TRGV4A0A0C4DH28 118 aa13.59□□□□□ -0.23
LMO2-203ENST00000411482 TINCRA0A1B0GVN0 87 aa13.59□□□□□ -0.23
LMO2-203ENST00000411482 LYRM9A8MSI8 78 aa13.59□□□□□ -0.23
LMO2-203ENST00000411482 LINC00469Q8N7U9 141 aa13.59□□□□□ -0.23
LMO2-203ENST00000411482 H7C423 109 aa13.59□□□□□ -0.23
LMO2-203ENST00000411482 LEPROTO15243 131 aa13.59□□□□□ -0.23
LMO2-203ENST00000411482 SMAGPQ0VAQ4 97 aa13.59□□□□□ -0.23
LMO2-203ENST00000411482 Q6ZUT4 128 aa13.59□□□□□ -0.23
LMO2-203ENST00000411482 FAM19A3Q7Z5A8 133 aa13.59□□□□□ -0.23
LMO2-203ENST00000411482 CEND1Q8N111 149 aa13.59□□□□□ -0.23
LMO2-203ENST00000411482 ZNF815PA8K554 130 aa13.58□□□□□ -0.24
LMO2-203ENST00000411482 H3BRM9 83 aa13.58□□□□□ -0.24
LMO2-203ENST00000411482 UBE2D1P51668 147 aa13.57□□□□□ -0.24
LMO2-203ENST00000411482 Q6ZVH6 145 aa13.57□□□□□ -0.24
LMO2-203ENST00000411482 J3QQQ9 107 aa13.56□□□□□ -0.24
LMO2-203ENST00000411482 TIRAPP58753 221 aa13.56□□□□□ -0.24
LMO2-203ENST00000411482 TSPEAR-AS2P59090 65 aa13.56□□□□□ -0.24
LMO2-203ENST00000411482 PLEKHB2Q96CS7 222 aa13.56□□□□□ -0.24
LMO2-203ENST00000411482 IGLV5-45A0A087WSX0 123 aa13.55□□□□□ -0.24
LMO2-203ENST00000411482 FXYD2P54710 66 aa13.55□□□□□ -0.24
LMO2-203ENST00000411482 LOC100131303A0A0U1RQF7 123 aa13.54□□□□□ -0.24
LMO2-203ENST00000411482 IGHV4-30-4P0DP06 118 aa13.54□□□□□ -0.24
LMO2-203ENST00000411482 DEFB130BP0DP73 79 aa13.54□□□□□ -0.24
LMO2-203ENST00000411482 DEFB130AP0DP74 79 aa13.54□□□□□ -0.24
LMO2-203ENST00000411482 MIFP14174 115 aa13.54□□□□□ -0.24
LMO2-203ENST00000411482 GCSHP23434 173 aa13.54□□□□□ -0.24
LMO2-203ENST00000411482 DEFB135Q30KP9 77 aa13.54□□□□□ -0.24
LMO2-203ENST00000411482 DGAT2L7PQ6IED9 249 aa13.54□□□□□ -0.24
LMO2-203ENST00000411482 OR5A1Q8NGJ0 315 aa13.54□□□□□ -0.24
LMO2-203ENST00000411482 MRAPQ8TCY5 172 aa13.54□□□□□ -0.24
LMO2-203ENST00000411482 RNF183Q96D59 192 aa13.54□□□□□ -0.24
LMO2-203ENST00000411482 TMEM243Q9BU79 118 aa13.54□□□□□ -0.24
LMO2-203ENST00000411482 A0A0J9YY99 117 aa13.53□□□□□ -0.24
LMO2-203ENST00000411482 A8MZ25 164 aa13.53□□□□□ -0.24
LMO2-203ENST00000411482 CDC42SE2Q9NRR3 84 aa13.53□□□□□ -0.24
LMO2-203ENST00000411482 RNASE13Q5GAN3 156 aaKnown RBP13.52□□□□□ -0.25
LMO2-203ENST00000411482 FAM222AQ5U5X8 452 aa13.52□□□□□ -0.25
LMO2-203ENST00000411482 Q8NAQ8 132 aa13.52□□□□□ -0.25
LMO2-203ENST00000411482 SPANXB1Q9NS25 103 aaPredicted RBP13.52□□□□□ -0.25
LMO2-203ENST00000411482 IGHV4-28A0A0C4DH34 117 aa13.51□□□□□ -0.25
LMO2-203ENST00000411482 C9orf118A6NHY6 69 aa13.51□□□□□ -0.25
LMO2-203ENST00000411482 LGALS3P17931 250 aaKnown RBP13.51□□□□□ -0.25
LMO2-203ENST00000411482 HIST1H4GQ99525 98 aa13.51□□□□□ -0.25
LMO2-203ENST00000411482 TRBV6-8A0A0A6YYG3 113 aa13.5□□□□□ -0.25
LMO2-203ENST00000411482 IGHV1-58A0A0C4DH39 117 aa13.5□□□□□ -0.25
LMO2-203ENST00000411482 A0A1B0GWB2 263 aa13.5□□□□□ -0.25
LMO2-203ENST00000411482 TGP01266 2768 aa13.5□□□□□ -0.25
LMO2-203ENST00000411482 SMIM13P0DJ93 91 aa13.5□□□□□ -0.25
LMO2-203ENST00000411482 UBE2V1Q13404 147 aa13.5□□□□□ -0.25
LMO2-203ENST00000411482 DEFB121Q5J5C9 76 aa13.5□□□□□ -0.25
LMO2-203ENST00000411482 PRO0255Q9UI72 69 aa13.5□□□□□ -0.25
LMO2-203ENST00000411482 K7EP13 123 aa13.49□□□□□ -0.25
LMO2-203ENST00000411482 IGHV3-30-3P0DP02 117 aa13.49□□□□□ -0.25
LMO2-203ENST00000411482 SCGB1D4Q6XE38 83 aa13.49□□□□□ -0.25
LMO2-203ENST00000411482 VSIG2Q96IQ7 327 aa13.49□□□□□ -0.25
LMO2-203ENST00000411482 LINC00242Q5T6M2 205 aa13.48□□□□□ -0.25
LMO2-203ENST00000411482 PTTG1IPP53801 180 aa13.47□□□□□ -0.25
LMO2-203ENST00000411482 HERVK_113P63121 156 aa13.47□□□□□ -0.25
LMO2-203ENST00000411482 GEMIN7Q9H840 131 aaKnown RBP13.47□□□□□ -0.25
LMO2-203ENST00000411482 DNAH9Q9NYC9 4486 aa13.47□□□□□ -0.25
LMO2-203ENST00000411482 NBEAL2Q6ZNJ1 2754 aa13.46□□□□□ -0.25
LMO2-203ENST00000411482 TMEM101Q96IK0 257 aa13.46□□□□□ -0.25
LMO2-203ENST00000411482 COL7A1Q02388 2944 aa13.46□□□□□ -0.26
LMO2-203ENST00000411482 UBE2L6O14933 153 aa13.45□□□□□ -0.26
LMO2-203ENST00000411482 GYPEP15421 78 aa13.45□□□□□ -0.26
LMO2-203ENST00000411482 AMMECR1LQ6DCA0 310 aa13.45□□□□□ -0.26
LMO2-203ENST00000411482 ATP6V0E2Q8NHE4 81 aa13.45□□□□□ -0.26
LMO2-203ENST00000411482 CDKN2A-AS1Q9UH64 79 aa13.45□□□□□ -0.26
LMO2-203ENST00000411482 IGLV5-39A0A0G2JS06 123 aa13.44□□□□□ -0.26
LMO2-203ENST00000411482 CCL25O15444 150 aa13.44□□□□□ -0.26
LMO2-203ENST00000411482 VAMP3Q15836 100 aa13.44□□□□□ -0.26
LMO2-203ENST00000411482 C12orf74Q32Q52 190 aa13.44□□□□□ -0.26
LMO2-203ENST00000411482 COX6A2Q02221 97 aa13.44□□□□□ -0.26
LMO2-203ENST00000411482 C10orf126Q8N4M7 172 aa13.44□□□□□ -0.26
LMO2-203ENST00000411482 TRAV8-3A0A0A6YYJ7 113 aa13.43□□□□□ -0.26
LMO2-203ENST00000411482 IGHV3-30P01768 117 aa13.43□□□□□ -0.26
LMO2-203ENST00000411482 SPART-AS1P0CW21 52 aa13.43□□□□□ -0.26
LMO2-203ENST00000411482 IGHV3-30-5P0DP03 117 aa13.43□□□□□ -0.26
LMO2-203ENST00000411482 SRSF9Q13242 221 aaKnown RBP eCLIP13.43□□□□□ -0.26
LMO2-203ENST00000411482 B9D2Q9BPU9 175 aa13.43□□□□□ -0.26
LMO2-203ENST00000411482 NHP2Q9NX24 153 aaKnown RBP13.43□□□□□ -0.26
LMO2-203ENST00000411482 PAX4O43316 350 aa13.42□□□□□ -0.26
LMO2-203ENST00000411482 DAD1P61803 113 aa13.42□□□□□ -0.26
LMO2-203ENST00000411482 ZFAND6Q6FIF0 208 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms