RNA–Protein interactions for RNA: ENST00000411265.1

RNU6-1001P-201, Transcript of RNA, U6 small nuclear 1001, pseudogene, humanhuman

BASIC

Gene RNU6-1001P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1001P-201ENST00000411265 C9orf116Q5BN46 136 aaPredicted RBP-1.17□□□□□ -2.6
RNU6-1001P-201ENST00000411265 LINC01545Q5VT33 79 aa-1.17□□□□□ -2.6
RNU6-1001P-201ENST00000411265 SPAG11AQ6PDA7 123 aa-1.17□□□□□ -2.6
RNU6-1001P-201ENST00000411265 KRTAP8-1Q8IUC2 63 aa-1.17□□□□□ -2.6
RNU6-1001P-201ENST00000411265 KNL1Q8NG31 2342 aa-1.17□□□□□ -2.6
RNU6-1001P-201ENST00000411265 DNAH8Q96JB1 4490 aa-1.17□□□□□ -2.6
RNU6-1001P-201ENST00000411265 IFNA17P01571 189 aa-1.18□□□□□ -2.6
RNU6-1001P-201ENST00000411265 PIGYQ3MUY2 71 aa-1.18□□□□□ -2.6
RNU6-1001P-201ENST00000411265 RPL7L1Q6DKI1 246 aaKnown RBP-1.18□□□□□ -2.6
RNU6-1001P-201ENST00000411265 REV3LO60673 3130 aa-1.18□□□□□ -2.6
RNU6-1001P-201ENST00000411265 TRBV6-1A0A0K0K1D8 114 aa-1.19□□□□□ -2.6
RNU6-1001P-201ENST00000411265 H0YJX3 145 aa-1.19□□□□□ -2.6
RNU6-1001P-201ENST00000411265 SMR3BP02814 79 aaPredicted RBP-1.19□□□□□ -2.6
RNU6-1001P-201ENST00000411265 UBE2D1P51668 147 aa-1.19□□□□□ -2.6
RNU6-1001P-201ENST00000411265 HAMPP81172 84 aa-1.19□□□□□ -2.6
RNU6-1001P-201ENST00000411265 SPANXN1Q5VSR9 72 aa-1.19□□□□□ -2.6
RNU6-1001P-201ENST00000411265 LSM2Q9Y333 95 aaKnown RBP-1.19□□□□□ -2.6
RNU6-1001P-201ENST00000411265 DNAH10Q8IVF4 4471 aa-1.2□□□□□ -2.6
RNU6-1001P-201ENST00000411265 CLPSL1A2RUU4 121 aa-1.2□□□□□ -2.6
RNU6-1001P-201ENST00000411265 SPINK4O60575 86 aa-1.2□□□□□ -2.6
RNU6-1001P-201ENST00000411265 SCTP09683 121 aa-1.2□□□□□ -2.6
RNU6-1001P-201ENST00000411265 G0S2P27469 103 aa-1.2□□□□□ -2.6
RNU6-1001P-201ENST00000411265 S100GP29377 79 aa-1.2□□□□□ -2.6
RNU6-1001P-201ENST00000411265 MYO7BQ6PIF6 2116 aa-1.2□□□□□ -2.6
RNU6-1001P-201ENST00000411265 SPTAN1Q13813 2472 aaKnown RBP-1.2□□□□□ -2.6
RNU6-1001P-201ENST00000411265 C5orf42Q9H799 3197 aa-1.2□□□□□ -2.6
RNU6-1001P-201ENST00000411265 PARP14Q460N5 1801 aa-1.2□□□□□ -2.6
RNU6-1001P-201ENST00000411265 TRBV20-1A0A075B6N2 111 aa-1.21□□□□□ -2.6
RNU6-1001P-201ENST00000411265 A0A1B0GV72 72 aa-1.21□□□□□ -2.6
RNU6-1001P-201ENST00000411265 I3L2K1 104 aa-1.21□□□□□ -2.6
RNU6-1001P-201ENST00000411265 COX6B1P14854 86 aa-1.21□□□□□ -2.6
RNU6-1001P-201ENST00000411265 SPRR1BP22528 89 aa-1.21□□□□□ -2.6
RNU6-1001P-201ENST00000411265 GNG10P50151 68 aa-1.21□□□□□ -2.6
RNU6-1001P-201ENST00000411265 VSTM2AQ8TAG5 236 aa-1.21□□□□□ -2.6
RNU6-1001P-201ENST00000411265 SKA2Q8WVK7 121 aaPredicted RBP-1.21□□□□□ -2.6
RNU6-1001P-201ENST00000411265 C10orf82Q8WW14 230 aa-1.21□□□□□ -2.6
RNU6-1001P-201ENST00000411265 SAR1AQ9NR31 198 aa-1.21□□□□□ -2.6
RNU6-1001P-201ENST00000411265 ERCC6L2Q5T890 1561 aa-1.21□□□□□ -2.6
RNU6-1001P-201ENST00000411265 WNK3Q9BYP7 1800 aa-1.22□□□□□ -2.6
RNU6-1001P-201ENST00000411265 SMG6Q86US8 1419 aaKnown RBP-1.22□□□□□ -2.6
RNU6-1001P-201ENST00000411265 TNFSF15O95150 251 aa-1.22□□□□□ -2.6
RNU6-1001P-201ENST00000411265 PIRTP0C851 137 aa-1.22□□□□□ -2.6
RNU6-1001P-201ENST00000411265 CMPK1P30085 196 aa-1.22□□□□□ -2.6
RNU6-1001P-201ENST00000411265 TFAMQ00059 246 aaKnown RBP-1.22□□□□□ -2.6
RNU6-1001P-201ENST00000411265 ZNF818PQ6ZRF7 136 aa-1.22□□□□□ -2.6
RNU6-1001P-201ENST00000411265 TCTE3Q8IZS6 198 aa-1.22□□□□□ -2.6
RNU6-1001P-201ENST00000411265 SMIM4Q8WVI0 70 aa-1.22□□□□□ -2.6
RNU6-1001P-201ENST00000411265 CENPHQ9H3R5 247 aa-1.22□□□□□ -2.6
RNU6-1001P-201ENST00000411265 KDM5CP41229 1560 aa-1.22□□□□□ -2.61
RNU6-1001P-201ENST00000411265 SIPA1L3O60292 1781 aaPredicted RBP-1.23□□□□□ -2.61
RNU6-1001P-201ENST00000411265 TRAV36DV7A0A075B6V5 113 aa-1.23□□□□□ -2.61
RNU6-1001P-201ENST00000411265 NCS1P62166 190 aa-1.23□□□□□ -2.61
RNU6-1001P-201ENST00000411265 UBE2G1P62253 170 aa-1.23□□□□□ -2.61
RNU6-1001P-201ENST00000411265 CDC26Q8NHZ8 85 aa-1.23□□□□□ -2.61
RNU6-1001P-201ENST00000411265 SMPXQ9UHP9 88 aa-1.23□□□□□ -2.61
RNU6-1001P-201ENST00000411265 HIGD1AQ9Y241 93 aa-1.23□□□□□ -2.61
RNU6-1001P-201ENST00000411265 KNDC1Q76NI1 1749 aa-1.23□□□□□ -2.61
RNU6-1001P-201ENST00000411265 IFT172Q9UG01 1749 aa-1.23□□□□□ -2.61
RNU6-1001P-201ENST00000411265 ERCC6Q03468 1493 aa-1.24□□□□□ -2.61
RNU6-1001P-201ENST00000411265 ARFGEF1Q9Y6D6 1849 aa-1.24□□□□□ -2.61
RNU6-1001P-201ENST00000411265 A0A1B0GX51 115 aa-1.24□□□□□ -2.61
RNU6-1001P-201ENST00000411265 AGPAT4-IT1Q9H0P7 198 aa-1.24□□□□□ -2.61
RNU6-1001P-201ENST00000411265 SPANXCQ9NY87 97 aa-1.24□□□□□ -2.61
RNU6-1001P-201ENST00000411265 R4GMQ9 66 aa-1.24□□□□□ -2.61
RNU6-1001P-201ENST00000411265 CEP290O15078 2479 aa-1.24□□□□□ -2.61
RNU6-1001P-201ENST00000411265 KDM3BQ7LBC6 1761 aa-1.24□□□□□ -2.61
RNU6-1001P-201ENST00000411265 PLXNB2O15031 1838 aa-1.24□□□□□ -2.61
RNU6-1001P-201ENST00000411265 WDR7Q9Y4E6 1490 aa-1.24□□□□□ -2.61
RNU6-1001P-201ENST00000411265 FREM2Q5SZK8 3169 aa-1.24□□□□□ -2.61
RNU6-1001P-201ENST00000411265 BICRAQ9NZM4 1560 aa-1.25□□□□□ -2.61
RNU6-1001P-201ENST00000411265 LRP6O75581 1613 aa-1.25□□□□□ -2.61
RNU6-1001P-201ENST00000411265 ASIPP42127 132 aa-1.25□□□□□ -2.61
RNU6-1001P-201ENST00000411265 CTAGE3PQ8IX95 158 aa-1.25□□□□□ -2.61
RNU6-1001P-201ENST00000411265 SDF2Q99470 211 aa-1.25□□□□□ -2.61
RNU6-1001P-201ENST00000411265 LINC00312Q9Y6C7 94 aa-1.25□□□□□ -2.61
RNU6-1001P-201ENST00000411265 V9GYQ6 96 aa-1.25□□□□□ -2.61
RNU6-1001P-201ENST00000411265 DMDP11532 3685 aa-1.26□□□□□ -2.61
RNU6-1001P-201ENST00000411265 CCL18P55774 89 aa-1.26□□□□□ -2.61
RNU6-1001P-201ENST00000411265 MIC13Q5XKP0 118 aa-1.26□□□□□ -2.61
RNU6-1001P-201ENST00000411265 MMGT1Q8N4V1 131 aa-1.26□□□□□ -2.61
RNU6-1001P-201ENST00000411265 SPTSSBQ8NFR3 76 aa-1.26□□□□□ -2.61
RNU6-1001P-201ENST00000411265 HSPB11Q9Y547 144 aa-1.26□□□□□ -2.61
RNU6-1001P-201ENST00000411265 MGAQ8IWI9 3026 aa-1.26□□□□□ -2.61
RNU6-1001P-201ENST00000411265 SPTBN5Q9NRC6 3674 aaKnown RBP-1.27□□□□□ -2.61
RNU6-1001P-201ENST00000411265 SPAARA0A1B0GVQ0 90 aa-1.27□□□□□ -2.61
RNU6-1001P-201ENST00000411265 C9orf92A6NGG3 77 aa-1.27□□□□□ -2.61
RNU6-1001P-201ENST00000411265 M0R135 149 aa-1.27□□□□□ -2.61
RNU6-1001P-201ENST00000411265 PIPP12273 146 aaPredicted RBP-1.27□□□□□ -2.61
RNU6-1001P-201ENST00000411265 CBLN1P23435 193 aa-1.27□□□□□ -2.61
RNU6-1001P-201ENST00000411265 DEFB135Q30KP9 77 aa-1.27□□□□□ -2.61
RNU6-1001P-201ENST00000411265 KRTAP19-5Q3LI72 72 aa-1.27□□□□□ -2.61
RNU6-1001P-201ENST00000411265 FXYD6Q9H0Q3 95 aa-1.27□□□□□ -2.61
RNU6-1001P-201ENST00000411265 LRRC37A3O60309 1634 aa-1.28□□□□□ -2.61
RNU6-1001P-201ENST00000411265 DAPK1P53355 1430 aa-1.28□□□□□ -2.61
RNU6-1001P-201ENST00000411265 ARHGEF10O15013 1369 aa-1.28□□□□□ -2.61
RNU6-1001P-201ENST00000411265 TSTD3H0UI37 97 aa-1.28□□□□□ -2.61
RNU6-1001P-201ENST00000411265 PPP1R17O96001 155 aa-1.28□□□□□ -2.61
RNU6-1001P-201ENST00000411265 CCL8P80075 99 aa-1.28□□□□□ -2.61
RNU6-1001P-201ENST00000411265 DDA1Q9BW61 102 aa-1.28□□□□□ -2.61
RNU6-1001P-201ENST00000411265 CDC42BPGQ6DT37 1551 aa-1.29□□□□□ -2.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms