RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 F8VRH5 84 aa0.28□□□□□ -2.36
RNU2-28P-201ENST00000410457 UQCR11O14957 56 aa0.28□□□□□ -2.36
RNU2-28P-201ENST00000410457 BAGE2Q86Y30 109 aa0.28□□□□□ -2.36
RNU2-28P-201ENST00000410457 LINC00474Q9P2X8 69 aa0.28□□□□□ -2.36
RNU2-28P-201ENST00000410457 AKAP6Q13023 2319 aa0.28□□□□□ -2.36
RNU2-28P-201ENST00000410457 UBR5O95071 2799 aaPredicted RBP0.28□□□□□ -2.37
RNU2-28P-201ENST00000410457 FAM24AA6NFZ4 105 aa0.27□□□□□ -2.37
RNU2-28P-201ENST00000410457 HMGN4O00479 90 aa0.27□□□□□ -2.37
RNU2-28P-201ENST00000410457 ATP5EP56381 51 aaPredicted RBP0.27□□□□□ -2.37
RNU2-28P-201ENST00000410457 PPP3R1P63098 170 aa0.27□□□□□ -2.37
RNU2-28P-201ENST00000410457 DPH3P1Q9H4G8 78 aa0.27□□□□□ -2.37
RNU2-28P-201ENST00000410457 GNG8Q9UK08 70 aa0.27□□□□□ -2.37
RNU2-28P-201ENST00000410457 SHROOM2Q13796 1616 aa0.27□□□□□ -2.37
RNU2-28P-201ENST00000410457 PSME4Q14997 1843 aa0.27□□□□□ -2.37
RNU2-28P-201ENST00000410457 ZNF236Q9UL36 1845 aa0.27□□□□□ -2.37
RNU2-28P-201ENST00000410457 HIVEP3Q5T1R4 2406 aa0.26□□□□□ -2.37
RNU2-28P-201ENST00000410457 IGLC7A0M8Q6 106 aa0.26□□□□□ -2.37
RNU2-28P-201ENST00000410457 MRPS10P82664 201 aaKnown RBP0.26□□□□□ -2.37
RNU2-28P-201ENST00000410457 TMEM170BQ5T4T1 132 aa0.26□□□□□ -2.37
RNU2-28P-201ENST00000410457 LINC01558Q9Y6Z2 57 aa0.26□□□□□ -2.37
RNU2-28P-201ENST00000410457 GOLGA4Q13439 2230 aaKnown RBP0.26□□□□□ -2.37
RNU2-28P-201ENST00000410457 PTPRQQ9UMZ3 2332 aa0.26□□□□□ -2.37
RNU2-28P-201ENST00000410457 KMT2DO14686 5537 aa0.25□□□□□ -2.37
RNU2-28P-201ENST00000410457 RIMS1Q86UR5 1692 aaKnown RBP0.25□□□□□ -2.37
RNU2-28P-201ENST00000410457 NCOA3Q9Y6Q9 1424 aa0.25□□□□□ -2.37
RNU2-28P-201ENST00000410457 APOC3P02656 99 aa0.25□□□□□ -2.37
RNU2-28P-201ENST00000410457 LINC00472Q9H8W2 130 aa0.25□□□□□ -2.37
RNU2-28P-201ENST00000410457 C10orf71Q711Q0 1435 aa0.24□□□□□ -2.37
RNU2-28P-201ENST00000410457 HAMPP81172 84 aa0.24□□□□□ -2.37
RNU2-28P-201ENST00000410457 SVBPQ8N300 66 aa0.24□□□□□ -2.37
RNU2-28P-201ENST00000410457 PRO0255Q9UI72 69 aa0.24□□□□□ -2.37
RNU2-28P-201ENST00000410457 HRNRQ86YZ3 2850 aaPredicted RBP0.24□□□□□ -2.37
RNU2-28P-201ENST00000410457 TCHHQ07283 1943 aa0.24□□□□□ -2.37
RNU2-28P-201ENST00000410457 SBF2Q86WG5 1849 aa0.24□□□□□ -2.37
RNU2-28P-201ENST00000410457 NCOR1O75376 2440 aa0.24□□□□□ -2.37
RNU2-28P-201ENST00000410457 KIF21AQ7Z4S6 1674 aa0.24□□□□□ -2.37
RNU2-28P-201ENST00000410457 MAPKBP1O60336 1514 aa0.23□□□□□ -2.37
RNU2-28P-201ENST00000410457 S100A1P23297 94 aa0.23□□□□□ -2.37
RNU2-28P-201ENST00000410457 S100A3P33764 101 aa0.23□□□□□ -2.37
RNU2-28P-201ENST00000410457 DCDP81605 110 aaKnown RBP0.23□□□□□ -2.37
RNU2-28P-201ENST00000410457 SPCS1Q9Y6A9 102 aa0.23□□□□□ -2.37
RNU2-28P-201ENST00000410457 LRP6O75581 1613 aa0.23□□□□□ -2.37
RNU2-28P-201ENST00000410457 PKDREJQ9NTG1 2253 aa0.22□□□□□ -2.37
RNU2-28P-201ENST00000410457 DOPEY2Q9Y3R5 2298 aa0.22□□□□□ -2.37
RNU2-28P-201ENST00000410457 MYO7BQ6PIF6 2116 aa0.22□□□□□ -2.37
RNU2-28P-201ENST00000410457 ABCA2Q9BZC7 2435 aa0.22□□□□□ -2.37
RNU2-28P-201ENST00000410457 MYOM1P52179 1685 aa0.22□□□□□ -2.37
RNU2-28P-201ENST00000410457 CHKB-CPT1BH3BT56 60 aa0.22□□□□□ -2.37
RNU2-28P-201ENST00000410457 BCE1O60756 84 aa0.22□□□□□ -2.37
RNU2-28P-201ENST00000410457 IFITM1P13164 125 aa0.22□□□□□ -2.37
RNU2-28P-201ENST00000410457 CDC42SE2Q9NRR3 84 aa0.22□□□□□ -2.37
RNU2-28P-201ENST00000410457 U3KQA8 63 aa0.22□□□□□ -2.37
RNU2-28P-201ENST00000410457 BIVM-ERCC5R4GMW8 1640 aa0.22□□□□□ -2.37
RNU2-28P-201ENST00000410457 FAM135AQ9P2D6 1515 aa0.22□□□□□ -2.37
RNU2-28P-201ENST00000410457 CELSR1Q9NYQ6 3014 aa0.21□□□□□ -2.38
RNU2-28P-201ENST00000410457 SFT2D2O95562 160 aa0.21□□□□□ -2.38
RNU2-28P-201ENST00000410457 FAM167A-AS1Q96KT0 104 aa0.21□□□□□ -2.38
RNU2-28P-201ENST00000410457 UQCR10Q9UDW1 63 aa0.21□□□□□ -2.38
RNU2-28P-201ENST00000410457 LRP1Q07954 4544 aaKnown RBP0.21□□□□□ -2.38
RNU2-28P-201ENST00000410457 LAMC1P11047 1609 aa0.2□□□□□ -2.38
RNU2-28P-201ENST00000410457 SPTBN1Q01082 2364 aaKnown RBP0.2□□□□□ -2.38
RNU2-28P-201ENST00000410457 NRKQ7Z2Y5 1582 aa0.2□□□□□ -2.38
RNU2-28P-201ENST00000410457 TRAV22A0A0B4J277 110 aa0.2□□□□□ -2.38
RNU2-28P-201ENST00000410457 GNG11P61952 73 aa0.2□□□□□ -2.38
RNU2-28P-201ENST00000410457 Q6JHZ5 121 aa0.2□□□□□ -2.38
RNU2-28P-201ENST00000410457 PZPP20742 1482 aa0.2□□□□□ -2.38
RNU2-28P-201ENST00000410457 SCAPERQ9BY12 1400 aa0.2□□□□□ -2.38
RNU2-28P-201ENST00000410457 ERCC6L2Q5T890 1561 aa0.19□□□□□ -2.38
RNU2-28P-201ENST00000410457 WNK2Q9Y3S1 2297 aa0.19□□□□□ -2.38
RNU2-28P-201ENST00000410457 SHANK2Q9UPX8 1470 aa0.19□□□□□ -2.38
RNU2-28P-201ENST00000410457 H3BQ15 152 aa0.19□□□□□ -2.38
RNU2-28P-201ENST00000410457 NXT2Q9NPJ8 142 aaKnown RBP0.19□□□□□ -2.38
RNU2-28P-201ENST00000410457 USF3Q68DE3 2245 aa0.19□□□□□ -2.38
RNU2-28P-201ENST00000410457 RAPGEF6Q8TEU7 1601 aa0.18□□□□□ -2.38
RNU2-28P-201ENST00000410457 M0R3E3 92 aa0.18□□□□□ -2.38
RNU2-28P-201ENST00000410457 WHAMMP3Q1A5X7 153 aa0.18□□□□□ -2.38
RNU2-28P-201ENST00000410457 PTPN13Q12923 2485 aa0.18□□□□□ -2.38
RNU2-28P-201ENST00000410457 MGPP08493 103 aa0.17□□□□□ -2.38
RNU2-28P-201ENST00000410457 Q8IZM0 81 aa0.17□□□□□ -2.38
RNU2-28P-201ENST00000410457 TP53AIP1Q9HCN2 124 aa0.17□□□□□ -2.38
RNU2-28P-201ENST00000410457 NHSL1Q5SYE7 1610 aa0.16□□□□□ -2.38
RNU2-28P-201ENST00000410457 GTF2H5Q6ZYL4 71 aa0.16□□□□□ -2.38
RNU2-28P-201ENST00000410457 SPRR4Q96PI1 79 aa0.16□□□□□ -2.38
RNU2-28P-201ENST00000410457 ARHGEF5Q12774 1597 aa0.15□□□□□ -2.38
RNU2-28P-201ENST00000410457 COL7A1Q02388 2944 aa0.15□□□□□ -2.39
RNU2-28P-201ENST00000410457 GVINP1Q7Z2Y8 2422 aa0.15□□□□□ -2.39
RNU2-28P-201ENST00000410457 HMGXB3Q12766 1538 aa0.15□□□□□ -2.39
RNU2-28P-201ENST00000410457 C20orf202A1L168 122 aa0.15□□□□□ -2.39
RNU2-28P-201ENST00000410457 NAP1L6A6NFF2 107 aa0.15□□□□□ -2.39
RNU2-28P-201ENST00000410457 I3L2K1 104 aa0.15□□□□□ -2.39
RNU2-28P-201ENST00000410457 CFDP00746 253 aaPredicted RBP0.15□□□□□ -2.39
RNU2-28P-201ENST00000410457 IGLC1P0CG04 106 aa0.15□□□□□ -2.39
RNU2-28P-201ENST00000410457 UBE2D3P61077 147 aa0.15□□□□□ -2.39
RNU2-28P-201ENST00000410457 UBE2D2P62837 147 aa0.15□□□□□ -2.39
RNU2-28P-201ENST00000410457 Q0VG73 95 aa0.15□□□□□ -2.39
RNU2-28P-201ENST00000410457 WFDC2Q14508 124 aa0.15□□□□□ -2.39
RNU2-28P-201ENST00000410457 FAIMQ9NVQ4 179 aa0.15□□□□□ -2.39
RNU2-28P-201ENST00000410457 TET3O43151 1660 aa0.14□□□□□ -2.39
RNU2-28P-201ENST00000410457 CSMD3Q7Z407 3707 aa0.14□□□□□ -2.39
RNU2-28P-201ENST00000410457 ARHGAP5Q13017 1502 aa0.14□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms