RNA–Protein interactions for RNA: ENST00000410055.5

PDK1-203, Transcript of pyruvate dehydrogenase kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDK1, Length 2,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDK1-203ENST00000410055 FAM231CP0DMU5 169 aa12.27□□□□□ -0.45
PDK1-203ENST00000410055 MED14OSP0DP75 135 aa12.27□□□□□ -0.45
PDK1-203ENST00000410055 RPL35AP18077 110 aaKnown RBP12.27□□□□□ -0.45
PDK1-203ENST00000410055 IGHV3-16A0A0C4DH30 117 aa12.27□□□□□ -0.45
PDK1-203ENST00000410055 VCYO14598 125 aa12.27□□□□□ -0.45
PDK1-203ENST00000410055 ZNRF2Q8NHG8 242 aa12.27□□□□□ -0.45
PDK1-203ENST00000410055 K7EQG2 157 aa12.26□□□□□ -0.45
PDK1-203ENST00000410055 TSHBP01222 138 aa12.26□□□□□ -0.45
PDK1-203ENST00000410055 Q6ZSV7 163 aa12.26□□□□□ -0.45
PDK1-203ENST00000410055 C11orf44Q8N8P7 122 aa12.26□□□□□ -0.45
PDK1-203ENST00000410055 IGHV1OR15-1A0A075B7D0 117 aa12.26□□□□□ -0.45
PDK1-203ENST00000410055 CRYGDP07320 174 aa12.26□□□□□ -0.45
PDK1-203ENST00000410055 TRAV8-3A0A0A6YYJ7 113 aa12.25□□□□□ -0.45
PDK1-203ENST00000410055 DSCR9P59020 149 aa12.25□□□□□ -0.45
PDK1-203ENST00000410055 DEFB131AP59861 70 aa12.25□□□□□ -0.45
PDK1-203ENST00000410055 C2orf48Q96LS8 159 aa12.25□□□□□ -0.45
PDK1-203ENST00000410055 POLR2KP53803 58 aaKnown RBP12.25□□□□□ -0.45
PDK1-203ENST00000410055 F8WDY8 70 aa12.24□□□□□ -0.45
PDK1-203ENST00000410055 CRYGAP11844 174 aa12.24□□□□□ -0.45
PDK1-203ENST00000410055 BBC3Q96PG8 261 aaPredicted RBP12.24□□□□□ -0.45
PDK1-203ENST00000410055 PROK1P58294 105 aa12.24□□□□□ -0.45
PDK1-203ENST00000410055 PYGO1Q9Y3Y4 419 aa12.24□□□□□ -0.45
PDK1-203ENST00000410055 FAM240AA0A1B0GVK7 77 aa12.23□□□□□ -0.45
PDK1-203ENST00000410055 NPC2P61916 151 aa12.22□□□□□ -0.45
PDK1-203ENST00000410055 RHOHQ15669 191 aa12.22□□□□□ -0.45
PDK1-203ENST00000410055 ZNF702PQ9H963 129 aa12.22□□□□□ -0.45
PDK1-203ENST00000410055 ZNF469Q96JG9 3925 aaPredicted RBP12.22□□□□□ -0.45
PDK1-203ENST00000410055 TRAV13-1A0A0B4J241 112 aa12.22□□□□□ -0.45
PDK1-203ENST00000410055 NXPH4O95158 308 aa12.22□□□□□ -0.45
PDK1-203ENST00000410055 IGIPA6NJ69 53 aa12.21□□□□□ -0.45
PDK1-203ENST00000410055 LINC00336Q6ZUF6 198 aa12.21□□□□□ -0.45
PDK1-203ENST00000410055 IMUPQ9GZP8 106 aa12.21□□□□□ -0.45
PDK1-203ENST00000410055 TINCRA0A1B0GVN0 87 aa12.21□□□□□ -0.45
PDK1-203ENST00000410055 LGALS3P17931 250 aaKnown RBP12.21□□□□□ -0.45
PDK1-203ENST00000410055 IGLV4-69A0A075B6H9 119 aa12.21□□□□□ -0.46
PDK1-203ENST00000410055 M0QY20 66 aa12.21□□□□□ -0.46
PDK1-203ENST00000410055 RBMY1A1P0DJD3 496 aaKnown RBP12.21□□□□□ -0.46
PDK1-203ENST00000410055 RBMY1CP0DJD4 496 aa12.21□□□□□ -0.46
PDK1-203ENST00000410055 RBMY1FQ15415 496 aaKnown RBP12.21□□□□□ -0.46
PDK1-203ENST00000410055 C9orf85Q96MD7 179 aa12.21□□□□□ -0.46
PDK1-203ENST00000410055 PRSS2P07478 247 aa12.2□□□□□ -0.46
PDK1-203ENST00000410055 RNASE13Q5GAN3 156 aaKnown RBP12.2□□□□□ -0.46
PDK1-203ENST00000410055 J3QQQ9 107 aa12.2□□□□□ -0.46
PDK1-203ENST00000410055 IGHV4-31P0DP07 118 aa12.2□□□□□ -0.46
PDK1-203ENST00000410055 A0A096LNT2 108 aa12.19□□□□□ -0.46
PDK1-203ENST00000410055 ADARB2-AS1A8MUL3 147 aa12.19□□□□□ -0.46
PDK1-203ENST00000410055 Q6YL49 198 aa12.19□□□□□ -0.46
PDK1-203ENST00000410055 UBE2E2Q96LR5 201 aa12.19□□□□□ -0.46
PDK1-203ENST00000410055 Q9UF83 564 aa12.19□□□□□ -0.46
PDK1-203ENST00000410055 Q96MF0 132 aa12.18□□□□□ -0.46
PDK1-203ENST00000410055 APCP25054 2843 aa12.18□□□□□ -0.46
PDK1-203ENST00000410055 FLNAP21333 2647 aaKnown RBP12.18□□□□□ -0.46
PDK1-203ENST00000410055 NOTCH2Q04721 2471 aa12.18□□□□□ -0.46
PDK1-203ENST00000410055 IGHV3OR16-12A0A075B7B8 117 aa12.18□□□□□ -0.46
PDK1-203ENST00000410055 A0A0B4J2C4 111 aa12.18□□□□□ -0.46
PDK1-203ENST00000410055 A0A1W2PRX2 142 aa12.18□□□□□ -0.46
PDK1-203ENST00000410055 H3BT86 120 aa12.18□□□□□ -0.46
PDK1-203ENST00000410055 TMEM61Q8N0U2 210 aa12.18□□□□□ -0.46
PDK1-203ENST00000410055 ZNF580Q9UK33 172 aa12.18□□□□□ -0.46
PDK1-203ENST00000410055 ICOSQ9Y6W8 199 aa12.18□□□□□ -0.46
PDK1-203ENST00000410055 ITPR3Q14573 2671 aa12.18□□□□□ -0.46
PDK1-203ENST00000410055 TRBV27A0A0K0K1C4 114 aa12.18□□□□□ -0.46
PDK1-203ENST00000410055 SEC61GP60059 68 aa12.18□□□□□ -0.46
PDK1-203ENST00000410055 LINC00643Q86TS7 51 aa12.17□□□□□ -0.46
PDK1-203ENST00000410055 AMELXQ99217 191 aa12.17□□□□□ -0.46
PDK1-203ENST00000410055 TMEM223A0PJW6 202 aa12.17□□□□□ -0.46
PDK1-203ENST00000410055 TRBV30A0A0K0K1B3 111 aa12.16□□□□□ -0.46
PDK1-203ENST00000410055 TMEM258P61165 79 aa12.16□□□□□ -0.46
PDK1-203ENST00000410055 CR1P17927 2039 aa12.16□□□□□ -0.46
PDK1-203ENST00000410055 DYNLRB2Q8TF09 96 aa12.16□□□□□ -0.46
PDK1-203ENST00000410055 MALP21145 153 aa12.15□□□□□ -0.46
PDK1-203ENST00000410055 A0A0J9YXV3 536 aa12.15□□□□□ -0.47
PDK1-203ENST00000410055 PFN2P35080 140 aa12.15□□□□□ -0.47
PDK1-203ENST00000410055 SDIM1Q6ZPB5 146 aa12.15□□□□□ -0.47
PDK1-203ENST00000410055 TMEM141Q96I45 108 aa12.15□□□□□ -0.47
PDK1-203ENST00000410055 PRO0628Q9UI54 55 aa12.15□□□□□ -0.47
PDK1-203ENST00000410055 IGHV3-38A0A0C4DH36 116 aa12.14□□□□□ -0.47
PDK1-203ENST00000410055 TIMM17AQ99595 171 aa12.14□□□□□ -0.47
PDK1-203ENST00000410055 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.13□□□□□ -0.47
PDK1-203ENST00000410055 I3L3M4 83 aa12.13□□□□□ -0.47
PDK1-203ENST00000410055 COX6CP09669 75 aa12.13□□□□□ -0.47
PDK1-203ENST00000410055 TMEM89A2RUT3 159 aa12.13□□□□□ -0.47
PDK1-203ENST00000410055 RBMY1BA6NDE4 496 aaKnown RBP12.13□□□□□ -0.47
PDK1-203ENST00000410055 RBMY1EA6NEQ0 496 aaKnown RBP12.13□□□□□ -0.47
PDK1-203ENST00000410055 RBMY1DP0C7P1 496 aaKnown RBP12.13□□□□□ -0.47
PDK1-203ENST00000410055 DEFB121Q5J5C9 76 aa12.13□□□□□ -0.47
PDK1-203ENST00000410055 PAPPA-AS1Q5QFB9 102 aa12.13□□□□□ -0.47
PDK1-203ENST00000410055 ATOX1O00244 68 aa12.12□□□□□ -0.47
PDK1-203ENST00000410055 UBR5O95071 2799 aaPredicted RBP12.12□□□□□ -0.47
PDK1-203ENST00000410055 NBPF19A0A087WUL8 3843 aa12.12□□□□□ -0.47
PDK1-203ENST00000410055 HIST2H2BCQ6DN03 193 aa12.12□□□□□ -0.47
PDK1-203ENST00000410055 LINC01600Q96MT4 127 aa12.12□□□□□ -0.47
PDK1-203ENST00000410055 PEMTQ9UBM1 199 aa12.12□□□□□ -0.47
PDK1-203ENST00000410055 A0A087WVE0 104 aa12.12□□□□□ -0.47
PDK1-203ENST00000410055 TRBV6-5A0A0K0K1A5 114 aa12.12□□□□□ -0.47
PDK1-203ENST00000410055 A0A0U1RQV1 116 aa12.12□□□□□ -0.47
PDK1-203ENST00000410055 ATP5G1P05496 136 aa12.12□□□□□ -0.47
PDK1-203ENST00000410055 C20orf203Q8NBC4 194 aa12.12□□□□□ -0.47
PDK1-203ENST00000410055 WFDC11Q8NEX6 87 aa12.12□□□□□ -0.47
PDK1-203ENST00000410055 XCL2Q9UBD3 114 aa12.12□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms